Mycobacterium antarcticum: TUM20985_48420
Help
Entry
TUM20985_48420 CDS
T11065
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
myq Mycobacterium antarcticum
Pathway
myq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TUM20985_48420 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myq03400
]
TUM20985_48420 (recB)
Enzymes [BR:
myq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TUM20985_48420 (recB)
DNA repair and recombination proteins [BR:
myq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TUM20985_48420 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
nSTAND_NTPase5
AAA_25
AAA_SelU
Motif
Other DBs
NCBI-ProteinID:
BDX34295
LinkDB
All DBs
Position
4944584..4947877
Genome browser
AA seq
1097 aa
AA seq
DB search
MEPFDLRGPLPAAHTTTVLEASAGTGKTFALAGLVTRYVAEGKASLDEMLLITFGKAASQ
ELRERVRAQITEAAVAFDNASAATDNEVVVHLLDGTDEQRAERRERLRDALAGFDAATIA
TTHQFCQLVLKSLGVAGDSDAGVQLVESLNDLVTEIVNDLYLAHFGNEREDPLLSYRDAL
TLAKEVVNHPATELRPRDPAPDSRAAVCVAFANHVLAEMETRKRRLGILGYDDLLTRLAA
ALDADDSPAGVRMHQRWPIVMVDEFQDTDPVQWRVIDRAFSKRSTVILIGDPKQAIYAFR
GGDIVTYLSAAQTAGDKKTLTTNWRSDGVLVDRLQAVLRGAQLGHPSIVVHDVAAAHQGQ
RLVGAPCDDPFRLRVVERKTFGRSGIQNLAIGDLREHIGRDLASDVGALLASGATYDGRP
VQARDVAVIVETHKDARACQRALTEAGVPSVYTGDSDIFGSEAADDWLALLEAFDQPHRA
GVVRAAAATMFFGKTAKDLVAGGDALTDRLAETLREWAAHARERGVAAIFEAAQLAGMSD
RVLSWRNGERHMTDLAHMTQLLQDVAHRERYNLPALRDWLRAERDGGSATERNRRLDSDA
AAVQIMTVWVSKGLQYPIVYLPFAFNRWVPDPEIILFHEGDTRCLHIGGKDSPDYHTVEA
QGRAEAAGDDSRLTYVALTRAQSQVVAWWSSARDEPNGGLSRLLRGRRPGEAVVPNRCVP
AKVTDDEALDRLRAWEALGGPVLEPSVPTTVTAPPTEPTPSDLGARHFHRSIDTTWRRTS
YSGLIRVTETAGVSSEPEIVELDDEVADIALVQNPVGPDVPSPMADLPKGAKFGSLVHAV
LETADPFAADLEAELAARISEHSVWWPVDVPDGELAAALVPMHDTPLGPLAGGLTLRQIG
LRDRLRELDFEFPLAGGDLGATAPQIHLRDVGRLVARHLGAGDPLASYADRLTGAGLGDQ
PLRGYLNGSIDVVLRIPDGYGCRYVVVDYKTNWLGEDETPLTAADYGRPRLVEAMLHSDY
PLQALLYNVVLHRFLRWRQPGYDPERHLGGVMYLFLRGMCGEGTPVVDGHPSGVFDWQPP
AALTVAMSDLLDAGRAE
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggaacctttcgaccttcggggaccactgcccgccgcacacaccacgacggtgctcgag
gccagcgccggcaccgggaagacgttcgccctggccggtctggtcacccgctacgtcgcc
gagggcaaggcgtcgctggacgagatgctgctgatcaccttcggcaaggccgccagccag
gagttgcgggaacgtgtgcgtgcccagatcaccgaggccgcagtagctttcgacaacgcc
tcggccgccaccgacaacgaggtggtggttcacctactcgacggcacggacgagcagcgc
gccgagcgacgggaacgcctacgcgacgccctggccggcttcgacgccgccaccatcgcc
accacccatcagttctgtcagctggtgctgaagtcgctcggtgtggcgggagattccgat
gccggggtccaactggtggagagtctcaacgacctggtcaccgagatcgtcaacgacctc
tacctcgcgcacttcggcaacgagcgcgaagatccgttgttgagctatcgcgacgccctc
accctcgccaaggaggtggtcaaccatccggctaccgaactgcggccacgcgatccggcg
cccgactcgcgggctgcggtctgcgtcgcgttcgccaatcacgttctggcggagatggag
acgcgtaagcggcgcctcggcatcctcgggtacgacgatctgctgacccgactggccgcc
gccctcgacgccgacgattcccccgccggcgtgcgcatgcaccagcgctggccgatcgtc
atggtcgacgagttccaggacaccgaccccgtgcagtggagggtcatcgaccgcgcgttc
agcaagcgctcgaccgtcatcctgatcggtgatccgaagcaggcgatctatgcgtttcgc
gggggcgacatcgtcacctatctgagcgccgcgcagaccgcaggcgacaagaagacgctg
accaccaattggcgcagcgacggtgtgctggtcgaccggttgcaggcggtgctgcgcggc
gcccagctggggcaccccagcatcgtcgtccacgacgtggcggccgcccaccagggccaa
cgactggtgggcgccccgtgcgacgatcccttccggctgcgcgtggtcgagcggaagacg
tttggccgcagcggtattcagaacctcgccatcggcgacctacgtgagcacatcggcagg
gacctggcgtccgacgtcggcgcgctgctcgccagcggcgccacctacgacggcaggccg
gtgcaggcgcgcgacgtcgcggtgatcgtggagacccacaaggacgccagggcctgccag
cgcgcactgaccgaggcgggtgttccctcggtgtacaccggcgactcggacatcttcggc
tccgaggccgccgacgactggctggccctgctggaggcgttcgaccaaccgcaccgcgcc
ggcgtcgtgcgcgcggccgccgcgacgatgttcttcggcaagacggccaaggatctggtg
gcgggcggtgacgcgctgaccgatcgactggccgagacgttgcgggagtgggccgctcac
gcccgcgagcgcggggtcgccgcgatcttcgaggccgcgcagctcgcggggatgagcgac
cgcgtgctgtcgtggcgcaacggcgagcgccacatgaccgatctcgcacacatgacgcag
ctgctgcaggacgtcgcccaccgcgagcggtacaacctgcccgcactgcgcgactggctg
cgcgccgaacgcgacggcggcagcgccaccgagcgcaaccgccgactcgacagcgacgcg
gcggccgtgcagatcatgacggtgtgggtcagcaagggcttgcagtacccaatcgtgtac
ctgccgtttgccttcaaccgctgggttcccgatccggagatcatcctgttccacgaagga
gacacccggtgcctgcacatcggcggcaaggacagccccgactaccacacggtggaggcg
cagggccgggccgaggcggccggtgacgacagccgactgacctacgtggccctgacccgg
gcgcagtcccaggtggtggcgtggtggtcctcggcgcgggacgagccgaacggcggactg
tcacggctgctgcgcgggcgccgccccggtgaggccgtcgtcccgaaccggtgcgtgccc
gccaaggtcaccgacgacgaggcgttggaccgactccgcgcgtgggaggcgctgggcggc
ccggtgctcgagccctcggtgccgaccacggtgacggctccacccaccgagccgacgcca
tcggatctgggcgccaggcacttccaccgcagcatcgacaccacctggcggcgtacctcc
tactcgggcctgatccgcgtgaccgagaccgcgggggtcagcagcgagccggaaatcgtc
gaactcgacgatgaagtggccgacatcgcgctggtccaaaaccccgtcgggccggacgtg
ccgtcgccgatggccgacctgcccaagggggcgaagttcggcagcctggtgcacgcggtc
ctcgagacggcggacccgttcgccgcggacctcgaggccgagctggcggcccggatcagt
gagcactcggtgtggtggccggtggacgtgcccgacggtgagctcgcggccgcgctggtg
ccgatgcacgacaccccgctcgggccgctggccggcgggctgacgttgcgtcagatcggg
ttgcgagaccggttgcgggagctcgacttcgaattccccctggccggtggtgacctcggc
gcgacggcaccgcagatccatctgagggacgtcggccggttggtggcgcgacacctcggt
gccggcgatccgttggcgtcgtacgcggaccgcctgaccggtgccgggctgggcgaccag
ccgttgcgcggctatctgaacgggtcgatcgacgtggtactgcgcattcccgacggctac
ggctgccgctacgtcgtggtcgactacaagacgaactggctcggcgaggacgagacgcct
ctgacagcagccgattacggccgcccgcggctggtcgaggcgatgctgcactcggactac
ccgctgcaggccttgctctacaacgtggtgctgcaccgattcctgcgttggcgccagccg
gggtatgaccccgaacgccacctcggcggggtgatgtatctgtttctgcgcggtatgtgc
ggtgagggaacccccgtggtcgacgggcatccctcgggggtgttcgactggcagccgccg
gcggcgctgaccgtggcgatgtcggatctgctcgatgcggggagggcggaatga
DBGET
integrated database retrieval system
