Mycobacterium antarcticum: TUM20985_48430
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Entry
TUM20985_48430 CDS
T11065
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
myq Mycobacterium antarcticum
Pathway
myq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TUM20985_48430 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myq03400
]
TUM20985_48430 (recD)
Enzymes [BR:
myq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TUM20985_48430 (recD)
DNA repair and recombination proteins [BR:
myq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TUM20985_48430 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
RecD_N
NAT10_TcmA_helicase
UvrD-helicase
SH3_13
PhoH
DUF8012
TraI_hel_assoc_N
nSTAND3
AAA_16
AAA_28
AAA_5
ABC_tran
SRP54
AAA
Mg_chelatase
AAA_29
TrwB_AAD_bind
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BDX34296
LinkDB
All DBs
Position
4947874..4949616
Genome browser
AA seq
580 aa
AA seq
DB search
MSSTETVDEADWRRAAGASGLLRTFNDAGVLESSDVHVAQRLTALAGEADERVALAVAFV
VRGLRGGSVCVDLSSVAAQVDDPELPWPAADAWLAAVHASPLLAAPHVLRREGDLLYLDR
YWREEEQVAKDLRAMLGGATTAADTDLERLFPAGYEEQRRAAKTALSQRLTVLTGGPGTG
KTTTVARLLALFAGQSGSAPRLRIALAAPTGKAAARLQEAVQVEIDELDPADRERISGLR
ATTLHRLLGSRPDNSSRFRHHRANRLPHDVIVVDETSMVSLTMMARLLEAVRPEARLLLV
GDPDQLASVEAGAVLADLVEGLGATEGTAVAALQTSHRFGESIGALAAAIRDGDADGAIE
VLRAGGEHIEWLDVEDAMADLSKVLLPQALRLREAAVLGDAATALETLDEHRLLCAHRRG
PHGVQHWNRQVERWLAEATGEPIWSDWYAGRPVLVTANDYGLTLYNGDTGVTVSDPTGLR
AVIGGAGAPLSFATGRLADVDTMHAMTIHKSQGSQASEVTVLMPPVDSRLLTRELFYTAV
TRAKAKVRVVGSEASVRAAIDRRAVRASGLALRLQRPAAD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgaccgagaccgttgacgaggccgactggcgccgcgcggccggggcatccgga
ctgttgcggacgttcaacgacgccggcgtcctcgaatcgtcggatgtgcatgtggcgcag
cgtcttacggccctggctggcgaggccgacgagcgggtcgccctcgcggtggccttcgtg
gtgcgcgggttgcggggcggctcggtgtgcgtcgacctgagctcggtcgccgcgcaggtc
gacgatcccgaacttccgtggccggcagccgacgcctggttggcggccgtgcacgcgagc
ccgctgctggccgcgccgcacgtgctgcgccgggagggcgacctgctgtacctggaccgg
tactggcgcgaggaggagcaggtcgccaaggatctgcgggcgatgctgggcggggcgacg
accgcggcggacaccgacctcgagcgcctgtttcccgccgggtacgaggagcagcgccgg
gcggcgaagaccgcactgtcgcaacggctcacggtgctgaccggtggaccgggaacgggt
aagaccaccaccgtggcgcgactgctggccttgttcgccgggcagtcgggctcggcgccg
cggctgcgcatcgctctggcggcaccgaccggcaaggctgccgcgcggctgcaggaggcc
gtgcaggtcgagatcgacgaactggatccggccgaccgggaacgcatctccggcctgcgc
gcgacgacgctgcaccggctgctgggcagtcggccggacaactcgtcacggttccggcat
caccgggccaaccggctgccgcacgatgtgatcgtggtggacgagacgtcgatggtgtcg
ttgaccatgatggcgcgactgctggaagcggtgcggcccgaggcgcgtctgctgctggtg
ggcgaccccgaccaactcgcgtccgtcgaggcgggcgcggtgttggcggacctggtggag
gggctcggcgccaccgagggcaccgcggtcgctgccctgcagacgtcgcaccgcttcggc
gagtcgatcggtgcgctggccgcagcaatccgcgacggggacgccgacggcgcgatcgag
gtgctgcgcgcgggtggtgagcacatcgagtggctcgacgtcgaggacgccatggccgat
ctctctaaggtgcttctgccgcaagcgcttcggctccgggaggcggcggtgctcggtgat
gccgcgacggcgctcgagacgctcgacgaacaccgcctgctgtgcgctcatcgccgcggc
ccgcacggggtacagcactggaatcgacaggtcgagcggtggctcgccgaagcgaccggg
gagcccatctggtcggactggtacgccggtcgaccggtgctggtcacggccaacgactac
gggctcacgctgtacaacggcgacaccggggtcaccgtcagcgacccgaccgggctgcgc
gccgtcatcggtggtgcgggtgcgccgctgtcgttcgccacggggcgactcgccgacgtc
gacaccatgcacgcgatgacgatccacaagagccagggttcgcaggcgtccgaggtgacg
gtgttgatgccgccggtcgactcgcgactgttgacgcgtgagctgttctacaccgccgtc
acgcgggccaaggcgaaggtgcgggtcgtcggttcggaggcgtcggtgcgggcggccatc
gatcgtcgcgcggtccgcgcgtccgggttggcgctcagattgcagcgaccggccgcggac
taa
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