Myroides sp. A21: MYRA21_1987
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Entry
MYRA21_1987 CDS
T03521
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
myr
Myroides sp. A21
Pathway
myr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYRA21_1987 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myr03021
]
MYRA21_1987 (rho)
03019 Messenger RNA biogenesis [BR:
myr03019
]
MYRA21_1987 (rho)
Transcription machinery [BR:
myr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MYRA21_1987 (rho)
Messenger RNA biogenesis [BR:
myr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MYRA21_1987 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
OB_RNB
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AJA69123
LinkDB
All DBs
Position
2145740..2147650
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AA seq
636 aa
AA seq
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MFEISELKKMKVADLQEIAKKAKIAKVASLKKDELIGQILEHQQATNAEEKKAPVKAKPV
DKAPLEEKKAPAVAKKVAVDKANNDVKTDKTVKQNTTPTTEKSRRPRLGKPNEDEGKVES
KVEQASRVLADNTQRKTTHQRNEETPAKQEQKKETVSESTAEEKVGSTNENRRDFKKRQP
DNNRRDGQKRDFKSRQQQSQPKNNASTEVTNAAATDREPVAKEEISTVDNTAPQQSENDN
QKRNNNQQNRNNNNKKNNFREPDYEFDGIIESEGVLEMMPDGYGFLRSADYNYLSSPDDI
YLSQSQIRLFGLKTGDTVKGVVRPPKEGEKFFPLVKVLKINGHDPQSVRDRVSFEHLTPL
FPNEKFNLDAKSSTISTRLMDMFAPIGKGQRGMIVAQPKTGKTVLLKEVANAIAANHPEA
YLIVLLIDERPEEVTDMQRSVNAEVIASTFDEPAERHVKVANIVLEKAKRLVECGHDVVI
LLDSITRLARAYNTVQPASGKVLSGGVDANALQKPKRFFGAARNIENGGSLSIIATALVD
TGSKMDEVIFEEFKGTGNMELQLDRKLANKRIFPAIDITSSSTRRDDLLLNEWELKRALM
VRRYIDDMNSVEAMTSIIDNVKNTTNNDEVLKTLSK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatttccgaactaaaaaaaatgaaggtcgcagatcttcaggagattgctaaa
aaagcaaaaattgctaaggtggcttctttgaaaaaagacgaacttatagggcagatatta
gaacatcaacaagcgacaaatgcagaggagaaaaaagcacctgtaaaagctaaacctgtg
gataaagctcctttagaggaaaagaaggctcctgcagtagctaaaaaagtagctgtggat
aaggctaacaatgatgtaaaaacagataaaacagttaaacaaaatacaactcctactact
gagaaatcaagaagacctagactaggtaaacctaatgaggatgagggtaaggtagagagt
aaagtggagcaggcttctcgtgtattagcagataatacacaacgcaaaacaactcaccag
agaaatgaagaaactcctgcgaaacaagagcaaaaaaaagaaaccgtaagtgaatcaact
gctgaagaaaaggtaggttctacaaacgagaatagaagggatttcaaaaagagacaacct
gataataatagacgtgatgggcaaaaacgtgatttcaaatctcgtcagcaacagtcacaa
cctaagaataatgcttctactgaagtaactaatgccgcagcaacagatagagagcctgta
gcgaaagaggaaatatctactgtagataatactgctcctcaacagtctgaaaacgacaat
caaaaaagaaataacaatcaacagaatagaaataataacaacaaaaagaataatttcaga
gaacctgattatgaatttgatggtattatagagagtgaaggggtattagaaatgatgcct
gatggatatggattcttgcgttctgcggattacaactatttatcttctccagatgatatt
tatttatctcagtcacagattagattattcggtcttaagactggtgatactgtaaaagga
gtggtgcgccctccgaaagaaggggagaagttcttcccattagtaaaggtgttgaaaatt
aatggtcacgatcctcagtctgttagagatagagtgtcttttgagcatttgactcctttg
tttccgaatgagaagtttaatctagatgcgaagagtagtactatttctactcgtctaatg
gatatgtttgctcctatcggtaaaggacaacgtggtatgatcgtagctcaaccaaagaca
ggtaagactgttcttttaaaagaggtagcgaatgctattgcagctaatcaccctgaggca
tacttaatcgtgttacttatagatgagcgtcctgaagaggtgacagatatgcagcgtagt
gtgaatgctgaggtaattgcttctacattcgacgaaccagcagagagacatgtgaaagta
gctaatatcgtattagagaaagcaaagagattagtagagtgtggtcatgatgtagtgatc
ttattagactctatcacgcgtttagcaagagcatataataccgtacagccagcatctgga
aaggtgttaagtggaggggtagatgctaatgcattacaaaaaccaaaacgattcttcgga
gcggctcgtaatatagaaaatggaggatctcttagtatcatcgctacagcgttagtagat
acagggtctaaaatggatgaggtgattttcgaagaatttaaaggtactggtaatatggag
ttacagttagatcgtaagttggcaaataaacgtattttccctgcgatagacattacttca
tctagtacacgtagagatgatttattattaaacgaatgggagcttaagcgtgctcttatg
gttagaagatatatagatgatatgaactctgtagaggcgatgacatctatcattgacaat
gtgaaaaatactacgaataatgacgaggtattaaaaacattaagcaagtaa
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