Myroides sp. A21: MYRA21_3160
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Entry
MYRA21_3160 CDS
T03521
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
myr
Myroides sp. A21
Brite
KEGG Orthology (KO) [BR:
myr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
myr03009
]
MYRA21_3160 (rumA)
Enzymes [BR:
myr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MYRA21_3160 (rumA)
Ribosome biogenesis [BR:
myr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MYRA21_3160 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRAM
TRM5-TYW2_MTfase
Cons_hypoth95
PCMT
Methyltransf_11
PrmA
FtsJ
NagA_C
Methyltransf_15
N6_N4_Mtase
Methyltransf_12
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AJA70257
LinkDB
All DBs
Position
3460719..3462131
Genome browser
AA seq
470 aa
AA seq
DB search
MSRKRTERIVFENVEVLDAGAKGVSVAKAPDGKVIFIPNVVPGDVVDVQTFKKRKAYYEG
KAVKFHKFSEHRIEPVCEHFGACGGCKWQNMNYAQQLFYKNQEVFNNLKRIGKIELPEFE
PILGSEETLFYRNKMEFSFSNARWLTPEEVASGEEMGKENALGFHIPKMWDKILDIKKCH
LQQDPSNEIRNEIRRFANEHNLAFFNPREQEGLLRTLMIRTASTGEVMVMIQFFYDNKEE
RELLLDFLAERFPMITSLQYVVNGKANDTIYDQDVVLYKGRDYILEEMEGLKFSINAKSF
YQTNSEQAYELYKITRDYAGLTGNELVYDLYTGTGTIAQFVSKKAGKVVGVEAVPEAIED
AKLNAERNNITNCDFFVGDMKNVFNDEFIATHGHPDVIITDPPRDGMHKDVVEMLLKVGA
KRIVYVSCNSATQARDLALMDHKYKVIKVRPVDMFPQTHHVENVVLLELR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaaaaagaacagaaagaatcgtattcgaaaacgtagaagtccttgatgcaggt
gcaaaaggcgtttcggtagctaaagctccagatgggaaagtaatctttattcctaacgta
gttccgggagatgtggtagatgtgcagactttcaaaaaacgcaaagcgtattatgaaggg
aaagctgtgaaattccacaaattttctgaacatagaatagagccagtatgtgaacacttc
ggagcttgtggtggatgtaaatggcaaaacatgaactatgcacaacagttattctacaag
aaccaagaggtttttaataacttaaagcgcataggtaaaattgaattacctgaattcgaa
cctatcttagggtctgaagaaacattgttctacagaaacaagatggagttctctttctct
aatgctcgctggttaacaccagaagaagtagcaagtggagaagaaatgggtaaagaaaat
gcattaggattccacatccctaaaatgtgggacaagatcttagacatcaaaaaatgtcac
ttacaacaagatccttctaatgaaatcagaaatgaaatcagaagattcgctaacgagcat
aatttagctttctttaatccacgtgagcaagaaggtttattgcgtaccttgatgatcaga
actgcttctacaggtgaagtaatggtgatgattcaattcttctatgacaacaaagaagaa
cgcgagctattattagacttcttagcagagcgcttccctatgattacatcattacagtat
gtagtcaatggtaaagcgaatgatactatctatgatcaagatgtagtgctttataaagga
cgtgattatatcttagaagaaatggaaggacttaaatttagcatcaatgctaagtcgttc
taccaaactaattctgagcaagcatacgaactatacaaaatcacaagagactatgctggt
cttacaggtaacgaattagtatatgacttatacacaggtacaggtactatcgctcagttc
gtttctaaaaaggcaggtaaagtagtcggtgttgaagctgtaccagaggcaatagaagat
gctaaactgaatgctgaacgcaataatattacgaactgtgacttctttgtaggagatatg
aagaatgtatttaacgatgagttcatagcgacacatggacatccagacgttatcattact
gaccctcctcgtgatggaatgcataaagatgtagtagaaatgctattaaaagtaggtgca
aaacgcatcgtatacgtaagctgtaactctgctacacaagcacgtgacttagctcttatg
gatcacaaatataaagtgatcaaagtacgtcctgtggatatgttccctcagacgcatcac
gtagaaaacgtagttctattagaactgagataa
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