Myroides sp. A21: MYRA21_3220
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Entry
MYRA21_3220 CDS
T03521
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
myr
Myroides sp. A21
Pathway
myr03030
DNA replication
myr03430
Mismatch repair
myr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
myr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYRA21_3220
03430 Mismatch repair
MYRA21_3220
03440 Homologous recombination
MYRA21_3220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
myr03032
]
MYRA21_3220
03400 DNA repair and recombination proteins [BR:
myr03400
]
MYRA21_3220
Enzymes [BR:
myr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYRA21_3220
DNA replication proteins [BR:
myr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYRA21_3220
DNA repair and recombination proteins [BR:
myr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYRA21_3220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
GIY-YIG
DNA_pol_A_exo1
DEDDh_C
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AJA70317
LinkDB
All DBs
Position
3519444..3520793
Genome browser
AA seq
449 aa
AA seq
DB search
MYAVLDIETTGGQFNEEGITEIAIYRFDGNQIVDQFISLVNPEMEIQPFVVKLTGINNAM
LRLAPKFYEIAKRIIEITDNCVIVAHNAEFDYRVLRNEFKRLGYEYSRNTLCTVELSQKL
LPDMPSYSLGKLVRSLGIPIADRHRANGDAMATEKLFELLLSKDKEKTILTSMIKSDIKT
GISPKFLDIVDTLPSTVGIYYILDKEGNIIFIGKSKNIRKKVLQHFTSNSPIFKKIQQET
YTVTFEKTGTELIALLKEAEEINTNKPKYNKVSKKSVFPYSIYLKTNLEGYLYLSIEKTD
GRKRNLMAFTSPNEARKFLHKIFQGQQELPYVEFIYEKKSTKITADNFFTNFTSTREEFN
ANILELFKPYDIDKDHVLILDKGRKVDEKSAVALEKGKLNGYCFYNLNHQINAPERIAAN
LTPILFNRNNRNIILNYLNKKIGYKLIHY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcagttttagatatagaaacaactggtgggcagtttaatgaagaaggaatcacc
gaaattgctatatatcgatttgatggtaatcagatcgtagatcagtttattagtttagtt
aatccagagatggagatacaacctttcgtagtgaaacttacgggaatcaataatgctatg
ctacggctagctccgaagttctacgagatagctaagcgcatcatagaaataacggacaac
tgtgtcatcgtagctcataatgctgaatttgattatcgagtactgcgcaatgagtttaaa
cgactaggttatgaatacagtcgcaatacactgtgtacagtagaactatcacagaagtta
ctgcctgatatgccttcttatagcttaggtaaactagtgcgatcacttggtattcctatc
gcagatagacatcgcgctaatggagatgctatggctacagaaaagctattcgaattactt
ctatcaaaagataaagagaagactatcttaacctctatgattaagtcagatatcaagact
gggattagccctaagtttttggatatcgtagacactttgccttctactgtaggtatttat
tatatcttggacaaagaaggtaatattatcttcatcggtaagagtaagaatattagaaag
aaagtcttacagcactttacaagtaattcgcctatattcaaaaaaatacaacaagaaacc
tatactgtcactttcgaaaaaacaggtactgaactcatcgcgcttctaaaagaggctgaa
gagatcaataccaataaaccaaagtacaataaggtcagtaagaaaagtgtattcccctac
tctatttatttaaaaactaatctagagggatacttatacctatctatcgaaaagacagat
ggtagaaagagaaatctaatggcgtttacatcgcctaatgaagctagaaaattcttacat
aagatattccaaggtcaacaagagttaccttatgtagagtttatatatgagaaaaaatca
actaaaataacagctgataacttcttcaccaactttacctcgacaagagaagagttcaat
gctaatatacttgaactatttaagccttatgatatagacaaagaccatgttctaatctta
gacaaaggccgtaaagtagatgagaaaagtgctgtcgctttagaaaaagggaagctaaac
ggatattgcttctataacttaaaccaccaaatcaacgccccagaacgaatagcagccaat
ttaacgccaattttgtttaatagaaacaacagaaatatcattcttaattatctaaataag
aagatcggttacaaattaattcactactaa
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