Methylosinus sp. 3S-1: Ms3S1_09790
Help
Entry
Ms3S1_09790 CDS
T11702
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
myss Methylosinus sp. 3S-1
Module
myss_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
myss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
myss02000
]
Ms3S1_09790
01504 Antimicrobial resistance genes [BR:
myss01504
]
Ms3S1_09790
Transporters [BR:
myss02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Ms3S1_09790
Antimicrobial resistance genes [BR:
myss01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Ms3S1_09790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
BGE84543
LinkDB
All DBs
Position
complement(1027815..1030934)
Genome browser
AA seq
1039 aa
AA seq
DB search
MSFNLSAAAVRRQTLTLAMMLAIAVAGLYCYLRLGRAEDPSFTIKVANVTTLWPGADATE
MRDQVSDLLEKKLQELPFLEKIETYSKPGVVMMQVTFKDTAPPAQAPYLFYQLRKKLGDI
RGELPRGVIGPNVNDEYGDVDSVLFAVSGEGADYHQLDRIVEMFRQRLLATPDVVKVDVY
GTQDRKIFVELSEAKLANLGVAPQALFDSLAKQNAVSAAGVFETTTRVPVRVTGALSGVE
AIAATPVEANGRVFRLGDVADVVPGFEDPPSLLVRHKGAPAIVLGAVMAKGGNVLSFGRE
IAATLEAARAETPVGIDIEQIADQPQVVAAAVGEFTRSFVEALGIVLIVSFVSLGFRTGI
IVALSVPLVLAIVFVFMHATGIDLQRISLGALIIALGLLVDDAIIAVEMMTVKIEQGHDR
VAAATFAWSSTAFPMLTGTLVTAAGFMPVGFAASSTGEYTGSLFAVLGVALVASWFVAVI
FTPYLGVKLLPEMRRAAHHDPEAIYETPLYRTLRRLITWSVDNRLLVVAGTAAVLVLAGL
GFVHVQKQFFPISERPELFFQLRLPEGSSIFTTSAAAQEAEALLKGDADAAAFTTYIGQG
PPRFWLGLNPALPNDAYAEIVIVAKDVAARERVKRRLDAALAAGAVSQARTRVDRFNFGP
PVGFPVQFRVIGRDPAEVRAIAYRVRDVMRADAAVVEPHLQWNERAPSVRLVVDQDRARQ
MGLTPQEVATRLQMLISGVTVTSLRDGIDRVDVVARAKAEERGDLGRLADMVIFSREGAG
VPVAQIAHISYEQEEPIFWRRNRDMLITVRADVRDGVQAPDVTSRIWPRLAELRASLPAG
YRIEMGGAIEESSKANASILAVFPVMILVMLVIVIVQLQDFMRLGLVMMSAPLGLIGASL
ALNLAGAPFGFVALLGLIALSGMDMRNSIILVDQVRQDLEHGALYREAIIGATVRRARPV
ALTALAAILAMIPLSRSSFWGPMALTIMGGLFVATFLTVLFLPALYALWFRRRLDLRLGE
TPASTARARISHLIGRAAQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaatctctccgccgccgcggttcgccgccagacgctcaccctcgcgatgatg
ctcgccatcgccgtcgccgggctctactgctatctgcggctcgggcgcgccgaggacccg
tccttcaccatcaaggtcgccaatgtcacgacgctatggccgggcgccgatgcgacggag
atgcgcgatcaggtttcggacctgctcgagaagaagctgcaggagctaccctttctcgag
aagatcgagacctattccaagcccggcgtcgtcatgatgcaggtgaccttcaaggacacc
gccccgccggcgcaggcgccttatctcttctaccagctgcgcaagaagctcggcgacatt
cgcggcgagctgccgcgcggcgtgatcgggcccaatgtgaacgacgaatatggcgacgtc
gattcggttctgttcgccgtcagcggcgagggcgccgattatcaccagctcgaccgcatc
gtcgaaatgttccgccagcgcctgctcgcaacgccggacgtcgtgaaggtcgacgtgtat
ggaacgcaggaccgcaagatcttcgtcgagctcagcgaggccaagctcgccaatctcggc
gtcgcgccgcaggctctgttcgactcgctcgccaagcagaatgcggtgagcgccgccggc
gtgttcgagacgacgacgcgcgtgccggtgcgcgtcaccggcgcgctttcgggcgtggag
gcgatagcggcgacgccggtcgaggccaatggccgcgtgttccgcctcggcgatgtcgcc
gatgtggtcccgggcttcgaagatccgccgagcctcttggtgcggcacaagggcgcgccg
gccatcgttctcggcgccgtgatggcgaagggcggcaatgtgctgagcttcggccgggag
atcgccgcgacgctcgaagcggcgcgcgcggagacgccggtcggcatcgacatcgagcag
atcgccgatcagccgcaggtggtcgccgcggcggtcggcgagttcacccgctcctttgtc
gaggcgctcggcatcgtgctgatcgtcagcttcgtctcgctcggctttcgcaccggaatc
atcgtcgcgctatccgtgccgctggtgctcgccatcgtcttcgtcttcatgcatgcgacg
gggatcgatctccagcgcatctcgctcggcgcgctcatcatcgcgctcggcttgctcgtc
gacgacgccatcatcgccgtcgagatgatgacggtgaagatagagcagggccatgaccgc
gtcgccgccgccaccttcgcctggagttcgaccgcctttccgatgctgaccggcactctg
gtcacggcggcgggcttcatgccggtcggctttgccgcctcctcgaccggcgaatatacg
ggctcgctgttcgcagtgctcggcgtcgcgctcgtcgcctcctggttcgtcgcggtgatc
ttcacgccttatctcggcgtgaagctcctgcccgagatgcgccgcgccgcgcatcacgat
ccggaggcgatctacgagacgccgctctatcgcacgctgcgccgcctcatcacctggagc
gtcgacaatcgcctcctcgtcgtcgccggcacggccgccgtgctggttctggccgggctc
ggcttcgtccatgtgcaaaagcagttcttccccatttccgagcggcccgagctgttcttc
cagctgcgcctgcccgagggctcgtcgatcttcacgactagcgccgcggcgcaggaggcc
gaggcgctgctgaagggcgacgccgacgcggccgcgttcaccacctacatcggccagggc
ccgccgcgcttctggctcggcctcaatccggctctgcccaatgacgcctatgcggagatc
gtcatcgtcgccaaggacgtcgcggcgcgcgagcgcgtcaagcggcggctcgacgccgcg
ctggccgcgggcgccgtgtcgcaggcgcgcacgcgcgtggatcgcttcaacttcggtccg
cccgtcggctttccggtgcagttccgcgtcatcggccgcgatcccgccgaggttcgcgcc
atcgcctatcgggtccgcgacgtcatgcgcgcggacgcggccgtcgtcgagccgcatctg
caatggaacgagcgcgcgccttcggtgcgcctcgtcgtcgatcaggaccgcgcgcggcag
atggggctgacgccgcaggaggtggcgacgcgcctgcagatgttgatctccggcgtcacc
gtcaccagcctgcgcgacgggatcgaccgcgtcgacgtcgtcgcccgggcgaaggcggag
gagcgcggcgatctcggacggctcgccgatatggtgatcttctcgcgcgagggcgccggc
gttcccgtcgcgcagatcgcgcatatttcctacgagcaggaggagcccatcttctggcgg
cgcaatcgcgacatgctcatcaccgtgcgcgccgatgtgcgcgacggcgtgcaggcgccc
gatgtgacgagccgcatctggccgcgcctcgccgagctgcgcgcctcgctgcccgcgggc
tatcggatcgagatgggcggggcgatcgaggaatcgagcaaggccaacgcctccatcctc
gccgtctttccggtgatgatcctcgtcatgctggtcatcgtcatcgtgcagctgcaggat
ttcatgcgcctcggcctcgtgatgatgagcgcgccgctcgggctcatcggcgcctcgctg
gcgctcaatctcgccggggcgcctttcggctttgtcgctctgctcgggctcatcgcgctc
tccggcatggacatgcgcaactcgatcattctcgtcgatcaggtgcgccaggatctcgag
catggcgccctttatcgcgaggccatcatcggcgcgacggtgcggcgcgcgcgcccggtg
gcgctcaccgcgctcgccgccatcctcgcgatgattccgctgtcgcgctcctctttctgg
gggccgatggcgctcaccatcatgggcggcctgttcgtcgcgaccttcctgaccgttctc
ttcttgccggcgctctatgcgttgtggttccggcgccggctcgatctgcgcctcggcgag
acgccggcctcgaccgcgcgcgcccgcatcagtcatctcatcggcagagcggcgcaatga
DBGET
integrated database retrieval system
