Methylosinus sp. 3S-1: Ms3S1_33500
Help
Entry
Ms3S1_33500 CDS
T11702
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
myss Methylosinus sp. 3S-1
Pathway
myss03420
Nucleotide excision repair
myss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
myss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ms3S1_33500
03430 Mismatch repair
Ms3S1_33500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myss03400
]
Ms3S1_33500
Enzymes [BR:
myss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ms3S1_33500
DNA repair and recombination proteins [BR:
myss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ms3S1_33500
MMR (mismatch excision repair)
Other MMR factors
Ms3S1_33500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BGE86914
LinkDB
All DBs
Position
3569413..3571746
Genome browser
AA seq
777 aa
AA seq
DB search
MTRPLPTEEFTPREGGIAARASALAGRNPFLDALNPEQRAAVETIDGPLLVLAGAGTGKT
RVLTTRIAHILASAKARPWEILAVTFTNKAAREMRERVETLAGPGAEALQWLGTFHAISA
KILRRHAELVGLKSNFTILDTDDQIRLLKQVLQAENVDDKRWPPRALAHQIDAWKNRGLS
PAQVPAGEARSFADGKGGKLYALYQERLKALNAVDFGDLLLEALRLFRENADVLDDYRQR
FRYILVDEYQDTNTAQYLWLRLIAQGRHNVCCVGDDDQSVYGWRGAEVENILRFEKDFPG
AKIVRLERNYRSTGHILAAASHLIAHNEGRLGKTLFTEGADGDKPTVTGVWDSEEEARAI
GEDIEQLQRKGQDLDEVAILVRASFQMREFEDRFITLGLPYRVIGGPRFYERLEIRDALA
YLRCVAQPFDDLAFERIVNTPKRGLGDATLQVLHDYSRQASVPLTQAARVLVETEELKPK
PRATLRNLMADFDRWRGLIDTTPQNELAELVLDESGYTQMWRDDKTPEAAGRLENLKELV
RAMEEFPDLAGFLEHVSLVMETDEAADQRRVSIMTLHGAKGLEFETVYLPGWEEGLFPHQ
RSLDDNGRAGLEEERRLAYVGVTRAKRRLKIFFATNRRIHGLWQSTIPSRFLDELPASDV
EVTEAAGASQYGSYGVSRFANMDSYGSSYSTPGWKRAQATRESARESGPAARRRAPLTIQ
GEVLAKSTSSSRFAVGVRVFHQKFGPGTVAAVDGNKLSVDFDKAGRKMVLESFVEQG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
ttgacacgtccgcttccgacggaggaattcacgccgcgcgagggcggcatagcggcgcgg
gcctcggcgctcgccggccgcaatccgtttctcgacgcgctcaatcccgagcagcgcgcc
gccgtcgagacgatcgacggcccgctgctggtgctggccggcgccggcaccggcaagacg
cgcgtgctgacgacgcgcatcgcccatattctcgccagcgccaaggcgcggccgtgggaa
atcctcgccgtcaccttcaccaacaaggccgcgcgcgagatgcgcgagcgcgtcgagacg
ctcgccggcccgggcgccgaggcgctgcaatggctcggcacgtttcatgcgatcagcgcc
aagatcctgcgccgccacgccgagctggtcgggctcaaatccaatttcaccattctcgac
accgacgaccagattcgcctcttgaagcaggtgctccaggccgagaatgtcgatgataag
cgctggccgccgcgcgccctcgcgcatcagatcgacgcgtggaagaaccgcggactctcg
cccgcgcaagtgcccgcgggcgaggcgaggagcttcgccgacggcaagggcggcaagctc
tatgcgctctatcaggagcgattgaaggcgctcaacgccgtcgacttcggcgatctgctg
ctcgaggccttgcgcctgttccgcgagaacgccgatgtgctcgacgactatcggcagcgc
ttccgctatattctcgtcgacgaatatcaggacaccaacactgcgcaatatctgtggctg
cgcctcatcgcgcaggggcgccacaatgtctgttgcgtcggcgacgacgatcagagcgtc
tatgggtggcgcggcgccgaggtcgagaacatattgcgcttcgagaaggatttccccggc
gccaagatcgtgcggctcgagcgcaattaccgctccaccggccatattctcgcggccgcc
tcgcatctcatcgcccataatgaaggccggctcggcaagaccttgttcaccgagggcgcc
gacggcgacaagccgaccgtcaccggcgtctgggacagcgaggaggaggcgcgtgcgatc
ggcgaggatatcgagcaattgcagcgcaaggggcaggatctcgatgaggtcgccattctg
gtgcgcgcctcgttccagatgcgcgagttcgaggatcgcttcatcacgctcggcctgcct
tatcgcgtgatcggcggcccgcgcttctatgagcggctcgagatccgcgacgcgctcgcc
tatctgcgctgcgtcgcgcagcccttcgacgatctcgccttcgagcgcatcgtcaacacg
cccaagcgcgggctcggcgacgccacgctgcaagtgctgcatgattattcgcggcaggcg
tcggttccgctgacgcaggcggcgcgcgtcctcgtcgagaccgaggagctgaagcccaag
cctcgcgcgacgctgcgcaatctgatggccgatttcgaccgctggcgcgggctcatcgac
acgacgccgcagaacgaattggccgagctggtgctcgatgaatccggttatacgcagatg
tggcgcgacgacaagacgcccgaggccgccggccgcttggagaatttgaaagagctggtg
cgggcgatggaggagttccccgatctcgccggcttcctcgagcatgtgtcgttggtgatg
gagaccgacgaggccgccgatcagcggcgcgtgtcgatcatgacgctgcatggcgccaag
ggcctcgagttcgagaccgtctatctccccggctgggaggagggactgttcccgcatcag
cgctcgctcgacgacaatggccgcgccggcctcgaggaggagcgccgcctcgcttatgtc
ggcgtcacccgcgccaagcgccgcctcaagatcttcttcgccaccaatcgccgcattcac
ggcctgtggcaatcgaccatcccctcgcgtttcctcgacgaattgccggcatcggatgtg
gaggtgacggaggcggcgggcgcctcgcaatatggctcctatggcgtgtcgcgcttcgcc
aatatggattcatacggctcgagctattcgacgccgggctggaagcgcgcccaggcgacg
cgagagtcggcgcgcgaatcggggccggccgcgcggcgccgcgcgcctttgaccattcaa
ggcgaggtgctggcgaagtcgacgagctcgtcacgctttgccgtcggcgtccgcgtgttc
catcagaaattcggtcccggcacggtggcggcggtggacggcaataagctgtccgtcgat
ttcgacaaggccgggcgcaagatggtgctggagagcttcgtcgagcaagggtga
DBGET
integrated database retrieval system
