Mycoplasma yeatsii: MYE_00630
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Entry
MYE_00630 CDS
T03676
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
myt
Mycoplasma yeatsii
Pathway
myt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
myt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MYE_00630 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myt03021
]
MYE_00630 (rpoB)
03400 DNA repair and recombination proteins [BR:
myt03400
]
MYE_00630 (rpoB)
Enzymes [BR:
myt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MYE_00630 (rpoB)
Transcription machinery [BR:
myt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MYE_00630 (rpoB)
DNA repair and recombination proteins [BR:
myt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MYE_00630 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Ribosomal_L9_C
Ubiquitin_6
MIC21
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AJM71619
LinkDB
All DBs
Position
142487..146350
Genome browser
AA seq
1287 aa
AA seq
DB search
MAYKIQQINRGVKRRNYAKVSGNLSLPNLIEVQTETFNWFKQQGIQEVLDEFFPILSMDG
TSVLTLENWGFKEPRISVRKAKEESKIYDAPIYANLKLSVNRTEEIQKDFEGFDEKDIKK
SLTIWLKNRTDSNQVAFKQSAGDSYFFEVTIKKAEKPDLIQIDIIENKASSLIANVSIYK
SGEVFLGDFPLMTEAGTFIINGSQKVIVSQLVRSPGAYFNKELNRKTGEMIYSGDIIPSR
GTWLEFETDSKKTGVDAINPLYVKIDKSRKTTATSLLTALGISSKQILEIFNNDAVINET
LQQDTSFGDQQVDWAHQVQEIYKKIRQGETATSEGASKFINGILFDKRKYDLTKAGRFKL
QQKLAIKNRIFGRIIAEDIVDANNNILVKKDTEINKSNIKEISDILDTDVMTIDVNYLEE
INGSRKVQTLKVYKDNDLKNEVTTLVGITKESVEEFVTVPDIISTISYLLNLKYNIGEID
DIDNLGNRRVRTVGELLQNQFRMGLNRIDKNVKEKLATSDLYKVKTSTIINAKPLTAIIG
EFFNLSQLSQFMDQINPLSELTNKRRLTALGPGGLSRDRAGLEVRDVHPSHYGRICPIET
PEGPNIGLINNLSTYARVDEYGFITTPYRKVVNGVIQNDQVEYLTADKERKFVIAQSNVK
QDENGKILDEMVVSRFNGDDYMARIDEIDYIDVSPKQIVSVATSAIPFLENDDANRALMG
ANMQRQAVPLIRPESPFVGTGIEFEAARDSGEAVVAKEDGIVKYVDSKMISIQGESGIKT
YTLSDFERSNNGTSLTQAPIVKKGDVVKKGEIIADGPSMDQGELAIGQNVVVAFSTYNGY
NFEDAIVMSERVVMDDRFTSIHIDEYTIEVRNTKQGLEEVTREVPNVSEQAKKHLDSEGI
VAIGTEVKVGDILVGKVTPKGQVQLSPEDKLLHAIFGEKSRNVKDNSLRVPNGGEGIVQS
IKRFKAKSASNPDGIDLPADIVEVIKVYIVQKRKIQEGDKMSGRHGNKGIISRILPVEDM
PHLEDGTPVDIMLNPQGVPSRMNIGQILEIHLGMAAKKINEKIITPVFEGLNEKELDEIM
AEAGMTNYGKVTLIDGKTGEAIDKPIAVGVMYMLKLSHMVDDKIHARNVGPYSLITQQPL
GGKAQNGGQRFGEMEVWALEAYGAAHTLREILTIKSDDIKGRSKTYEAIVRSRRVPEPGI
PESFNVLSKEIMGLGFNMYMIDEQGDKLSINAYEEEEQLSKLFDDENLEVENLSIDNQDV
EKELEDLTYIDEKDILESFGFNEEDEE
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaaaattcaacaaattaaccgtggagttaaaagacgtaactatgctaaagtt
tcaggtaatttatctctacctaacttaattgaagtgcaaactgaaacatttaactgattc
aaacaacaaggtattcaagaagttttagatgagtttttccctattttatcaatggatgga
actagtgttttaacattagaaaattgaggttttaaagaaccaagaattagtgtaagaaaa
gctaaagaagaatcaaaaatttatgatgcaccaatttatgcaaacttaaaattatctgtt
aatagaactgaagaaattcaaaaagatttcgaaggttttgatgaaaaagatattaaaaaa
tcattaactatatgattaaaaaacagaacagatagtaatcaagtagcatttaaacaaagt
gctggtgattcatacttttttgaagtaactattaaaaaagctgaaaaaccagatctaatc
caaattgatattattgaaaacaaagcatcatcattaattgcaaatgtttcaatttataaa
tcaggtgaagttttcttaggagatttcccattaatgactgaagctggaacatttattatt
aatggttcacaaaaagttattgtttctcaattagttagatctccaggtgcttactttaat
aaagaattaaacagaaaaactggagaaatgatttattctggagatatcattccaagtcgt
ggtacttgattagaatttgaaacagattctaaaaaaactggagttgatgcaatcaatcca
ttatatgtaaaaatcgataaatcaagaaaaactactgcaacttctcttttaacagcttta
ggaattagttcaaaacaaatattagaaatttttaataatgatgctgttataaatgaaact
ttacaacaagacacaagttttggagatcaacaagttgattgagcacaccaagtacaagaa
atctataaaaaaattagacaaggtgaaacagcaactagtgaaggtgcttctaaattcatt
aacggtattttatttgacaaacgtaaatacgatttaacaaaagctggaagatttaaatta
caacaaaaattagctattaaaaacagaatttttggaagaattatagctgaagacatcgtt
gatgctaacaacaacattttagttaaaaaagatactgaaattaacaaatcaaacattaaa
gaaatttcagatattttagatactgatgtaatgacaattgatgttaattatttagaagaa
atcaatggaagtagaaaagttcaaacacttaaagtttataaagataatgatctaaaaaat
gaagtaactactttagttggaatcactaaagaaagcgttgaagaatttgttacagttcct
gatattatttcaacaatttcatatctattaaacttaaaatacaacattggtgaaattgat
gatattgataacttaggaaacagacgtgtaagaacggttggagaattattacaaaaccaa
ttcagaatgggattaaaccgtattgacaaaaatgttaaagaaaaattagctacaagtgat
ttatacaaagttaaaacttcaacaatcatcaacgctaaacctttaacagcgattattggt
gaattctttaacttatcacaattatcacaattcatggatcaaattaacccattatcagaa
ttaactaataaacgtagattaacagctttaggacctggtggattatcaagagatagagct
ggactagaagttcgtgacgttcacccatctcactatggaagaatttgtcctattgaaact
ccagaaggaccaaacatcggattgattaataacttatcaacttatgcaagagttgatgaa
tacggatttattacaactccatatagaaaagttgttaacggagttattcaaaatgatcaa
gttgaatacttaacagctgataaagaaagaaaatttgttattgctcaatcaaacgttaaa
caagatgaaaatggaaaaatcttagatgaaatggtagtttcacgttttaatggtgatgac
tacatggctagaattgatgaaattgattatattgacgtttcaccaaaacaaatcgtttct
gttgccacttcagcaattcctttcttagaaaacgatgacgccaaccgtgcattgatggga
gcaaacatgcaacgtcaagctgttccattaattagaccagaatctccatttgttggaact
ggtattgaatttgaagctgctcgtgactcaggagaagcggttgttgctaaagaagacgga
atcgttaaatacgttgattcaaaaatgatttcaattcaaggagaatcaggaattaaaact
tatacattatctgattttgaaagatcaaataatggtacttcattaactcaagctccaatt
gttaaaaaaggtgatgtagttaaaaaaggtgaaattattgccgatggcccatcaatggat
caaggagaattagctattggtcaaaacgttgtggttgccttttcaacttataatggatac
aacttcgaagatgcgattgttatgagtgaaagagttgtaatggatgatagattcacttca
attcacatcgatgaatacacaatcgaagtaagaaacacaaaacaaggactagaagaagtt
acacgtgaagttccaaacgtaagtgaacaagctaaaaaacacttagatagtgaaggaatc
gtagctattggaactgaagttaaagttggagatattttagttggtaaagttactccaaaa
ggtcaagttcaattatcaccagaagataaattattacatgcaatctttggtgaaaaatca
agaaacgttaaagacaactcattaagagttccaaacggtggagaaggaattgttcaatca
attaaacgtttcaaagctaaatctgcatcaaatccagatggtattgatttaccagcagat
atcgtagaagtaattaaagtttacatcgttcaaaaacgtaaaatccaagaaggtgacaaa
atgtcaggacgtcacggaaacaaaggtattatttcaagaattctaccagttgaagatatg
cctcacttagaagacggtacaccagttgacattatgttaaacccacaaggggttccttca
cgtatgaacatcggtcaaattctagaaatccacttaggaatggctgctaaaaaaataaat
gaaaaaataattactccggtatttgaaggattaaatgaaaaagaattagatgaaataatg
gctgaagctggaatgacaaattatggaaaagttactttaattgatggtaaaactggtgaa
gctattgataaaccaatcgcagttggtgtgatgtatatgttaaaactatcacacatggtt
gatgacaaaattcacgcacgtaacgtaggaccatactcattaattactcaacaaccttta
ggaggaaaagctcaaaacgggggacaacgtttcggagaaatggaagtttgagctttagaa
gcttatggagctgctcacacattacgtgagattctaacaattaaatcagatgacattaaa
ggtcgttcaaaaacttatgaagctattgttagatcaagacgtgttcctgaaccaggaatt
ccagaatcattcaacgttctttcaaaagaaattatgggattaggattcaatatgtatatg
attgatgaacaaggtgataaattatcaattaatgcatatgaagaagaagagcaattatca
aaattatttgatgatgaaaatctagaagtagaaaacctatcaattgataaccaagatgtt
gaaaaagaattagaagatctaacttacattgatgaaaaagatatcttagaatcatttgga
tttaatgaagaagatgaagaataa
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integrated database retrieval system
