Mycoplasma yeatsii: MYE_02110
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Entry
MYE_02110 CDS
T03676
Symbol
rnj2
Name
(GenBank) mRNA degradation ribonuclease J2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
myt
Mycoplasma yeatsii
Pathway
myt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYE_02110 (rnj2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myt03019
]
MYE_02110 (rnj2)
Messenger RNA biogenesis [BR:
myt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MYE_02110 (rnj2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
AJM71901
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Position
complement(498630..500381)
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AA seq
583 aa
AA seq
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MPNIRFTALGGQDEKGKNLYVLEINDEMFILDAGLKYPEKGILGIDTVIPKLDYIKQNKK
KIKAVFLTNPSAYNIGSLGYLLKEIDVPVYCNEITELIAKIKIERMRLKHKEKMFKTVKD
KDVIKVGNVKVEVFRTTSSSPQSLGYAFSTDLGSIIYVGDYIIDGKEQSYFSTDFAYISE
VAKKGVLAFISDAEFASRQDFTVPNHKIDRYIAAPFKEKKTKIVVGIFEEDIYKLSEICM
AAIENNRKIAVYGRTMDAVLKSNLIHENLVINKDSLISIQEYMQSDDGVLIISGNADDLY
SKLMKIATGNDHVVEFTEKDVIILATPPAAGIEKRHAQILDELARTDAKLVALSDKNIWS
MRASYEDIKMMTSLLKPKYFIPIKALYKECLKAEKAAIEAGVEPGNVGIIDNGETLVLSK
KHLAISEHMADEGNTYVDGVGIGDVGSIVLNERKQLATDGVIIVGATIDSRNKELVSLID
TQMRGVLYIQEDNPIFKIIQKEVTNLILEGQTLFKQHPNKYDLSEIKKEITNKVRSLVRQ
ESGKNPIVLAIINETDGKVFVAKQTKKRHNNQTKTNSKPKKVQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatattagatttacagctcttggtggacaagacgaaaaaggtaaaaacctttac
gttttagaaatcaatgatgagatgtttatattagatgctggattaaaatatccagaaaaa
ggtattttaggaattgatactgttattcctaaattagactatattaaacaaaataagaaa
aaaattaaagcagtatttttaactaatcctagtgcttataatatcggatcattaggatat
ttattaaaagaaatagatgttcctgtttattgtaatgaaattactgaattaatagcaaaa
atcaaaatcgaaagaatgagattaaaacataaagaaaaaatgtttaaaacagttaaagat
aaagatgtaattaaagtaggaaatgtaaaagttgaagtatttagaacaacttcatcatca
cctcaatctcttggttatgcttttagtactgatttaggttctattatttatgttggagat
tatattattgatggaaaagaacaatcttatttttcaactgattttgcttatatttcagaa
gttgctaaaaaaggagttctagcatttatttcagatgctgagtttgcttcacgtcaagac
tttactgttccaaatcataaaattgatcgttatatagctgcaccatttaaagaaaagaag
acaaaaatagtagtaggaatatttgaagaagatatttataaattaagtgaaatttgtatg
gctgctattgaaaataatagaaaaattgcagtttatggaagaacaatggatgcagtttta
aaatctaatttaattcatgaaaacttagtaattaataaagattcattaattagtattcaa
gaatatatgcaatcagatgatggagtattaattatttcaggtaatgctgatgatctatat
tctaaattaatgaaaatagcaacaggaaatgatcatgttgttgaatttactgaaaaagat
gtaattattctagcaactccacctgctgctggaattgaaaaaagacacgctcaaatttta
gatgaattagctagaactgatgcaaaattagttgctttaagtgataaaaatatttgatct
atgagagcaagttatgaagatattaaaatgatgacttcattattaaaacctaaatatttc
attccaattaaagcattgtataaagaatgtttaaaagctgaaaaagcagcaatcgaagca
ggagtagaacctggtaatgttggaattattgataatggtgaaacattagtattatctaaa
aaacatttagcaatatctgaacatatggctgatgaaggtaatacttatgttgatggtgtt
ggaattggtgatgttggatctattgttttaaatgaaagaaaacaactagcaactgatgga
gtaattatagttggtgcaacaattgattctagaaataaagaattagtttcattaattgat
actcaaatgcgtggagtgttatacattcaagaagataatccaatctttaaaataattcaa
aaagaagtaactaatttaattttagaaggtcaaacattatttaagcaacaccctaataaa
tacgatctaagtgaaattaaaaaagaaataacaaataaagtaagaagtttagtaagacaa
gaatcaggaaaaaaccctattgttttagctattattaatgaaactgatggaaaagttttt
gttgcaaaacaaactaaaaaaagacataacaatcaaactaaaactaattcaaaacctaaa
aaagttcaataa
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