Myotis yumanensis (Yuma myotis): 138992328
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Entry
138992328 CDS
T10762
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
myum Myotis yumanensis (Yuma myotis)
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
myum04040
]
138992328 (SCN11A)
Ion channels [BR:
myum04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138992328 (SCN11A)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
138992328
NCBI-ProteinID:
XP_070247151
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All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MDDWCHPVIFPDARNFRPFTSDSLAAIEKRIAIQKEKKKLKDKTAAEPQPRPQLDLKASR
KLPKLYGDIPRELIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFILGPFNSVRS
LAIRISVHSLFSMFIICTVIINCIFMATAHGKDNNIIDTDLAEYIFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIATAFVSLLPFSKANSISLSSLRTFRVFRALKAISVVS
GLKVIVGALLRSVKKLVDVLILTLFCLSIFALVGQQLFMGTLNLKCVKNDCKNISNPDDY
CFEKKDSTEFRLCGTWLGNGACSKQFACQHTKKNPDYGFTNFDNFGWSFLAMFRLMTQDS
WEKLYRQTLRTSGPFAVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVTAETEAKEKM
FQEAQQLLREEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNKKRKSFFFREPGKEQVL
GSDSDEDSPKKPYLLEQTKRLSQNLSVDFCEEHRDPFQRQRALSAVSILTITMQEQEKSQ
EPCLPCGKNLASKYLIWNCSPQWLRFKKVLRTVMTDPFTELVITICIIINTLFLAMEHHN
MNNNFEIMLQTGNSVFTGIFIAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFIDVVMPH
SLPVFRSFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVIFIFSVVGMQLFG
SSFSCLKKDPKPCDSTTSSCFRRWHMGDFYHSFLVVFRILCGEWIENMWECMMEANKYLC
IVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGNLEGESRKTKVQLALDRFHRAFRFVI
HTLQQFCRKRCRRQKLPKQKEVTESSSAENKDVISLVTEIKRGPETWEESSVLTPAPKPL
SVRPDRTWLAPLAEEEDIRSPVDNEQPVTQPESGEQAYELDQKDKSTSLRVQNVEIEVFS
EDDPYISVQNTRKKSDTISVLSECSTIDLQDPFRRIPEMVPQKEPERCFPKGLVCCSKCC
AVNKRKSPWILWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDIHLDKQPKIQELL
NCTDNIFTYIFILEMGLKWVAFGFRKYFTSAWCWLDFTIVIVSVTTLIDLKGLKSFRTLR
ALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNLFSGKFGRCMNT
TANPALLINYTIIANRNQCISENFTWDNLKVNFDNVGMAYLALLQVATFKGWTDIMHAAV
DAREKEDQPAFETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNHQQKKISGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTNQFFDVFIIIFILLNMISMMAES
YDQSQTMKSILENLNLAFVVIFTIECLVKIFALRQYYFTNGWNLFDCLIVVISIVSTMIS
LLENQDHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLV
MFIYAIFGMNSFCRVKQDSGIDDIFNFETFAGSLLCLFQITTSAGWDTLLNPMLKSEASC
DPKKENCHLSTIAIAYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEMFY
EVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKFQFLVMDLPMVSGDRLHCLDILF
AFTTRVLGDSTGLDSMKAMMEEKFMEANPLKKLYEPIVTTTKRTEEERCAAVIQKAFRKY
IVMVKTNKCALEDRPHSPLQTLCNGDLSSSGVAEGKVHCD
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggatgactggtgccacccagtaattttcccagatgcgcggaacttccgccccttcact
tctgattctctggctgcgattgagaagcggattgccatccaaaaggaaaaaaagaagctc
aaagacaagacagcggcagaaccccaacctcgacctcagcttgacctaaaggcctccagg
aagttgcccaagctctatggtgacattccccgtgagctgatagcaaagcccctggaagac
ttggacccattctacagaaatcataagacatttatggtgttgaacaaaaagagaacaatc
taccgcttcagtgccaaacgtgccttgttcattttgggccctttcaattcagtccgaagc
ttagccattagaatctcagtccattcattgttcagcatgttcatcatctgcactgtcatc
atcaactgcatattcatggccacagctcatgggaaagacaacaacattatagatactgac
cttgctgagtatatcttcactgggatttatatttttgaagctttgataaaaatattggca
agaggttttatcctggatgagttctcttttcttcgagatccatggaactggctggactcc
attgtcattgcaacagcgtttgtgtcattattaccattttcgaaggccaacagcatcagt
ctgtcatccctgcgtaccttccgagtgttcagagctttgaaagcaatttcagtagtttca
ggtctgaaggtcattgtgggggccttgctgcgctctgtgaagaagcttgttgacgtgttg
atcctgactctcttttgcctcagcatctttgccctggtaggtcagcagctcttcatggga
actctgaacctgaaatgtgtcaagaacgactgcaagaacatcagtaaccctgacgactat
tgctttgaaaagaaagattccactgaattcaggttgtgtggcacctggttgggtaatgga
gcctgttccaagcagtttgcatgccagcacaccaaaaagaatcctgactatggctttacg
aatttcgacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcc
tgggagaagctttatcgacagaccttgcgtacctcggggccctttgcagtcttcttcttt
gtggtggtcatcttcctgggctctttctacctgattaacttaaccctggctgttgtcacc
atggcttatgaggaacagaacaggaacgtaactgctgagacggaggccaaggagaagatg
ttccaggaagctcagcaactgttaagagaggaaaaggaggctctggttgccatggggatt
gacagaagttcgcttaattcccttgaagcatcatctttttccccaaagaagagaaagcta
tttggtaataagaaaaggaagtccttctttttcagagagcctgggaaagaacaggttcta
ggatcagattctgacgaagattcccccaaaaagccatacctcctagagcaaaccaaacga
ctgtctcagaacctgtcagtggatttctgtgaggagcatagagacccctttcaaaggcag
agggcgctgagtgctgttagcatcctcaccatcaccatgcaggaacaagaaaaatcccag
gagccttgcctcccatgtgggaaaaatctggcatccaaatacctcatctggaactgtagt
ccccagtggctacgctttaagaaggtcttgagaaccgtgatgaccgacccgtttactgag
ctggtcatcaccatctgcatcataatcaacactctcttcttggccatggagcatcacaac
atgaacaataattttgagattatgttgcaaacaggaaattcggttttcactggcattttt
atagcagaaatgtgcctaaaaatcatcgcgctcgatccctaccactactttcgccgaggc
tggaacatttttgacagcattgttgctcttctgagttttatagatgtggtgatgccgcac
agtttgccagttttccgttccttcagagtgctgagggtcttcaagttagcaaaatcttgg
ccaactttaaacacactgattaagatcataggccactctgttggagcccttggaaacctg
actgtggtcctggccattgtgatctttattttctcagtagttggcatgcagctgtttggc
tctagtttcagttgcttaaagaaagatccaaaaccctgtgattctacgacatcctcatgt
tttcgacgctggcacatgggggatttctaccactccttcctggtggtgttccgcatcctc
tgcggggaatggatcgagaacatgtgggaatgtatgatggaagctaataaatacctgtgc
attgttgtcttcttgttgatcatggtgataggaaaactcgtggtactcaacctcttcatt
gccttgctgctcaattccttcagcaatgaggagagggatggaaacttggagggagagtcc
aggaaaaccaaagtccagttagccctggatcgtttccaccgggctttccgttttgtgata
catacgctgcagcaattttgtcgcaaacgatgcaggaggcagaagttaccaaagcaaaaa
gaggtgacagaaagctcttctgcagagaacaaagacgtcatttccctggtcacagagatt
aaaagaggcccagagacctgggaagagtctagtgtactaactcctgcaccaaaacccttg
agtgttaggcccgatcggacttggttggccccacttgcagaggaagaagatattcgatct
cctgtagacaatgaacagcctgtcacacaacccgagtctggggagcaggcctatgagctc
gatcagaaggacaagtccaccagtctaagagttcaaaatgtggaaattgaggtgttctct
gaagatgatccttatatatcagtacagaatacccgaaagaagtctgatactatcagtgtg
ctctcagaatgtagcaccattgacctgcaagatccctttaggcggatacctgaaatggtt
ccccaaaaggaaccagagagatgttttcccaaaggcctggtttgctgctccaagtgctgt
gctgtgaacaaaagaaagtccccctggatcctttggtggaacctgcggaaaacctgctac
caaatagtgaaacacagctggtttgagagctttattatctttgtgattctgctgagcagt
ggggcattgatatttgaagatattcaccttgataaacaacccaaaatccaagaattactt
aattgtactgacaatattttcacatacatttttatcctggagatgggtttgaaatgggtg
gcctttggatttcggaagtatttcaccagtgcctggtgctggcttgatttcaccattgtg
attgtgtctgtgactactctcattgacttaaagggcttgaaatccttccggactcttcgc
gcactgaggcccctgcgagctctgtcccagtttgaaggaatgaaggtggtagttaatgct
ctcataggtgccatacctgccattctgaatgttttgcttgtctgcctcattttctggctt
atattttgtatcctgggagtaaacttgttttccggaaaatttggaagatgcatgaataca
acagctaacccggctttacttataaattacaccattattgcaaaccgaaatcaatgtata
agtgaaaatttcacctgggacaacctgaaagtcaactttgacaatgtgggaatggcttac
ctcgccctgctgcaagtggcaacatttaagggctggacagatattatgcatgcagctgtc
gatgccagagagaaggaagaccagccagcatttgagacgaacatatacatgtacctttac
tttgtattttttatcatctttggctcattcttcactctaaatctctttattggtgttata
attgataacttcaatcatcagcagaaaaagataagtggccaagacatttttatgacagaa
gaacagaagaaatactataatgcaatgaaaaagttaggatccaaaaaacctcaaaagccc
attccaagacctctgaacaaatgccagggtctcgtatttgacctggtcacaaaccagttc
tttgatgtcttcatcatcatcttcattctcctcaacatgattagcatgatggctgagtca
tatgaccagtctcagaccatgaaatccatccttgagaatctcaacctggcctttgtggtc
atcttcacaattgagtgtctcgtcaaaatctttgctttgaggcaatactacttcaccaat
ggctggaatttatttgattgtttgatcgtggtcatttctatcgttagtaccatgatttct
ctcttggaaaaccaggatcacattcctttccctccgacactcttcagaattgtccgcttg
gctcggatcggcaggatcctgaggcttgtccgggcggcacgaggaatcaggactctcctt
ttcgctctgatgatgtcccttccctctctgttcaacatcggtcttctactctttctggtt
atgtttatttatgccatttttggaatgaactctttctgtagagtgaagcaagactctgga
attgatgacatattcaacttcgaaacttttgcaggcagcttgctctgtctcttccaaata
accacctcagcaggttgggacaccctcctcaaccccatgttgaaatctgaagcttcatgt
gaccccaaaaaagagaactgtcacctctctaccatagccatagcctactttgtcagttac
atcatcatttccttcctcattgttgtcaacatgtacattgctgtgattttagaaaacttc
aatacagccaccgaagaaagcgaggaccctttgggtgaagatgactttgaaatgttctac
gaagtctgggaaaagtttgacccagaagccacacagtttatcaaatattctgccctttct
gactttgccgatgcccttcctgagcctttgcgtgtggccaagccaaataaattccaattc
ctagtaatggacttgcccatggtaagtggagatcgcctccactgcctggacattctcttc
gcgttcaccacgagggtactcggcgactccactggcctggacagcatgaaagcgatgatg
gaggagaagttcatggaagccaaccctctgaagaagttgtacgaacccatagtcaccacc
accaagaggacggaagaggagcgatgcgctgccgtcattcaaaaggcctttcggaagtac
atagtgatggtgaagacgaacaagtgtgccttggaagacaggcctcattcaccactccag
acactctgcaatggagacttgtctagctccggggtggccgagggcaaggtccactgtgac
tga
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integrated database retrieval system
