Myotis yumanensis (Yuma myotis): 138992411
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Entry
138992411 CDS
T10762
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03082
ATP-dependent chromatin remodeling
myum04714
Thermogenesis
myum05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138992411 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
138992411 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
138992411 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myum03021
]
138992411 (SMARCC1)
03036 Chromosome and associated proteins [BR:
myum03036
]
138992411 (SMARCC1)
Transcription machinery [BR:
myum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138992411 (SMARCC1)
Chromosome and associated proteins [BR:
myum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138992411 (SMARCC1)
PBAF complex
138992411 (SMARCC1)
GBAF(ncBAF) complex
138992411 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
138992411
NCBI-ProteinID:
XP_070247263
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MAAAAGGGGPGAAAGGAGAGAGGAAVAAGLAAYRRKDGGPAGKFWESPETVSQLDSVRVW
LGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVANPAFTKLPAKCFMDFKAGGAL
CHILGAAYKYKNDQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIDL
KLANKLKDIIKRHQGTFTDEKSKASHHIYPHPSSQEDEEWLRPVMRRDKQVLVHWGSYPD
SYDTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQ
RISTKNEEPVRSPERRDRKASASARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQ
KEEEEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTA
GGKEDDDPSKGDPSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGK
NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQ
VDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQN
FGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECI
LHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAA
LEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPEEPEKLEGAEE
EKMETEADGQQPEKAENKGENEMDEGDKAQDGDNEKSSEKEQDNEVSEDIKSEEKGSEEN
KELTDTCKERESEIGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVAL
LVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQM
EQQHGQNPAQGHQHPGGPGLAPLGAAGHPGMLPHQQPPPYPLMQHQMPPPHPLQPGQIPG
PGSMMPGQPLPGRMIPSVAAGIHAPGSGPAPAGMPPVPGSILGPRVTLTAPNGMYPPPQP
PPADGVPPPPAPGPPAPAAP
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcagctggcggcggcgggccgggggcggcggcgggcggcgcgggggcgggg
gcgggcggcgcggcggtggctgcgggcctggccgcgtaccggcggaaggacgggggcccg
gccggcaagttctgggagagcccggagacggtgtcccagctggactcggtgcgcgtgtgg
ctgggcaagcactacaagaagtacgtccacgcggatgcgcccaccaacaagacgctggct
gggctggtggtgcagctcctgcagttccaggaagatgccttcgggaagcacgtcgccaac
ccggccttcaccaagctcccggcgaaatgtttcatggatttcaaggctggcggcgccttg
tgtcacattctcggggccgcgtacaagtacaagaatgaccagggctggcggaggtttgat
ctgcagaatccatcccgaatggatcgtaatgttgagatgtttatgaatattgaaaaaacg
ttggtgcagagcaattgcctgaccagacccaacatctacctcattccagacattgacctg
aagttggctaacaaattgaaagatattatcaaacgacatcagggcacattcactgacgag
aagtcgaaagcttcccaccacatttacccgcatccttcctcacaagaggatgaggagtgg
ctgcgacccgtgatgaggagggacaagcaggtgctggtgcactgggggtcgtaccccgac
agctatgatacttgggtccatagtaatgatgttgatgcggaaattgaagatccaccaatt
ccagaaaagccgtggaaggttcatgcaaaatggattttggacactgatgtgttcaatgag
tggatgaatgaggaggactatgaggtggatgagaacaggaagcccgtgagttttcgacag
cgaatttcaacaaagaatgaagagccagtgagaagtccggagaggagagatcggaaggcg
tcggcgagtgctcggaagaggaagcactcgccctccccgccgccccccacgcccacagag
tcacggaagaagagtgggaagaaaggccaagctagtctctatgggaagcgcaggagtcag
aaagaggaagaggaacaagaagacctcaccaaggacatggaggaccccacacctgtgccc
aacatcgaggaagtggtgctccccaaaaacgtaaatccaaagaaagatagtgagaataca
cctgtgaaaggaggaactgtagctgatctagatgagcaggatgaagagacggtcacagca
ggaggaaaggaagatgacgaccccagcaaaggggatccgagtcggtcagtggaccctggt
gaagacaacgtgacagagcagaccaatcacatcatcattcccagctacgcatcctggttt
gactataactgtattcacgtgattgaacggcgtgctctccctgagtttttcaatggaaaa
aacaaatccaagactccagagatatacttggcgtatcgaaattttatgattgacacatat
cgcctgaacccccaagaatatctgaccagcaccgcttgtcggaggaacttgactggcgac
gtgtgtgctgtgatgagggtccacgccttcctagagcagtggggccttgttaattaccaa
gtggacccggaaagccggcccatggcgatgggacccccgccgacgccccacttcaacgtg
ctggctgacaccccctctgggctggtgcctctgcaccttcgatcccctcaggtccctgct
gctcagcagatgttaaattttcccgagaagaacaaggaaaaaccgattgatctgcagaac
tttggtctccgtactgacatctactccaaaaaaaccttggcaaagagtaaaggtgccagc
gctggaagggagtggacggagcaggagaccctgctgctgctggaggccctggagatgtac
aaggacgactggaacaaggtgtcggagcacgtgggcagccgcacgcaggacgagtgcatc
ctgcacttcctgcggctgcccatcgaggacccgtacctggagaactcggacgcctccctg
gggcccctggcctaccagccggtccccttcagccagtcaggaaaccccgtcatgagcacg
gtagccttcctggcgtcggtggtggaccctcgagtggcatctgctgcagctaaagcggct
ctggaggagttttctcgggtccgggaggaggtgcccctggaactggtggaagctcatgtc
aagaaagtacaagaagcagctcgagcctctgggaaagtggaccccacctacggcctggag
agcagctgcatcgcgggcacaggccccgaggagccagaaaagcttgaaggagctgaagag
gaaaaaatggaaacagaagctgatggtcagcagccggaaaaggcagaaaacaaaggggaa
aatgaaatggatgaaggtgataaagcccaagatggagacaatgaaaaaagcagcgagaag
gaacaggataatgaagttagtgaggatatcaagtcagaggaaaaggggtctgaagagaac
aaggagctcactgatacttgtaaagaaagagaaagcgaaattgggaagaagaaagtagaa
catgagatttccgaaggaaacgtagccacggccgccgcagctgctctcgcctcagctgcc
accaaagccaagcacctggctgccgtggaagagaggaagatcaagtccctggtggcgctc
ctggtcgagacgcagatgaagaagctggagatcaagctgcggcatttcgaggagctggag
acgatcatggacagagagaaggaggctttagaacagcagaggcagcagctgctcaccgaa
cgccagaacttccacatggagcagctgaaatacgcggagttgcgagcccgccagcaaatg
gagcagcagcacgggcagaaccctgcacagggccaccagcacccgggggggccgggcctg
gcgccgctgggagcagcagggcaccccggcatgctgcctcaccagcagcccccgccctac
cctctgatgcagcaccagatgccgccgccccacccgctccagccaggtcagatcccaggc
ccaggttccatgatgcccgggcagcccctgccaggccgcatgattcccagcgtcgccgcc
ggcatccacgcccccgggagtggccccgcccctgctgggatgccgccagtgccagggagc
atcctgggaccccgggtcaccctcacggcccccaacggcatgtatcccccaccgcagccg
ccgcctgcagacggagtccctccacctcctgctccgggcccacccgccccggccgcgccc
tag
DBGET
integrated database retrieval system
