Myotis yumanensis (Yuma myotis): 138995998
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Entry
138995998 CDS
T10762
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
myum Myotis yumanensis (Yuma myotis)
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
myum03000
]
138995998 (RC3H1)
04121 Ubiquitin system [BR:
myum04121
]
138995998 (RC3H1)
Transcription factors [BR:
myum03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
138995998 (RC3H1)
Ubiquitin system [BR:
myum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138995998 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
138995998
NCBI-ProteinID:
XP_070252964
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPVTLCSGVEDTKHYDEARKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLGPRRPLSASMGQLNEVGLPSAAILPDE
GAVDLPSRKPPSLPNGIVSAGNTVTQLIPRGTDPSYDSTLKPGKMDHLSNSAPGSPPDLL
ESVPKSIPHPVPPRGPSDLPPMPVTKPMQMIPRGSQLYPAQQADVYYQDPRGAAPPFEPA
PYQQGVYYTAPPCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQQYPPMYP
PHYDGRRVYPAQSYPREEIFRESPIPIEIPPAAVPSYVPESRERYQQVEGYYPVAPHPTQ
IRPSYIREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPPTFH
QEELLDEELKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVAAGSVEMMNVESKG
MRDQRLDHQRRATETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMAPQGAPTK
SINISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLPSADREQLR
LELQQLNHQISQQTQLRGLEAVSNRLVLQREVNTLAAQSQPPPPPPKWPGMISSEQLSLE
LHQVEREIGKRTRELSLENQCSLDMKSKLNTSKQAENGQPEPQTKVTTEDLTLTFSDVPN
GSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctttcctgcccgatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccggaaggcttgcccatttgaccagaccactatcaatactgac
attgagctccttcccgtgaactcagcgttgcttcagctagtgggtgctcaggtccctgag
cagcagcccgttacattgtgtagtggggttgaagatacaaagcattatgacgaagccagg
aaatgtgtagaagaattagcattgtacctgaaaccactcagcagcgctagaggagtgggt
ctgaatagcactactcagagtgttctgagtcgcccaatgcagaggaagctggtgactctg
gtccactgccaattagtggaagaagaaggcaggattcgtgccatgcgagcagctcgatct
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcagcaactctct
tctaatctttgggcagcagtcagggctcggggctgccagttccttggaccagcaatgcag
gaggaagctctaaagttggttctcctggctttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttagagccacggttccctcaagcctctaaaact
agcattgggcatgttgtccagctcctgtatagagcctcctgcttcaaggtcaccaaacgt
gatgaagattcctctttgatgcaactgaaagaagaattcaggacctatgaagctctgcgg
cgagagcatgactcccagatagttcagattgctatggaagcaggcttacgaatcgcacca
gaccagtggtcctctttgctttatggagaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagactccagcctcttttgcacaaagtgtccaggaactaacaattgct
ctccagcggaccggagatccagcaaatttgaaccgactaagaccccatttggagctatta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatgga
ctggttgctgtgcgtacagtggtacatgggctggttgattatatccagaaccacagcaag
aaaggagcggatcaacagcagcctccacagcatagcaaatataaaacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcccag
gaggaactggaaaaatttcgtaaaatgaacaaacgcctgggtcccagaagacccctgagt
gcctctatgggtcagcttaatgaggtgggcctgccttcagcagctatccttcctgacgaa
ggtgcggtcgatctgccgagcagaaaacccccttctctgcccaatgggattgtatcagca
gggaacacagtaactcagctgattccacgaggaacagaccccagctatgattctactctg
aaaccaggaaagatggatcatctgagcaacagtgcccctggatcccctcctgacctgcta
gaatctgtccccaagagtattccacatcctgtacctccaagggggccatcagacttgcct
cccatgcctgtcactaaaccaatgcagatgataccgcggggttcgcagttatatcccgcc
cagcaggcagacgtgtattatcaggatcctcgaggagccgcgccaccatttgaaccagca
ccttatcagcagggtgtgtactacactgcgccaccgtgtgtgtcccgctttgtccgaccg
ccaccatctgctcctgagcccggacctccctacttggatcattacccaccctacctccaa
gatcgtgttgtaaactctcaatacggcacacagccacaacagtacccacctatgtaccca
ccacactatgatggccgtcgagtataccctgctcaatcttatccaagagaggagattttc
cgagaaagtcctatacccattgagattccacctgcagcagtaccatcctatgtaccagaa
tccagagaaagataccaacaggtggagggttactatccagtggctcctcatccaactcag
atcagaccttcgtacatcagagagcctccttatagccggcttcctcctcctccccagccc
caccctagtctagatgagctacatcgcagacgaaaggaaataatggcccaactagaggaa
aggaaggttatctctccacctccttttgcaccttcaccaactttgccacctaccttccat
caagaggaattattggatgaagaattgaaggtagctgggaaatataaaggaaatgattat
agccaatactctccctggtcatgtgacaccatcggctcctacattggaaccaaagatgca
aaacccaaagatgctgtggcagcagggagtgtggaaatgatgaatgtggagagtaaagga
atgagagaccagcggttggatcatcagagaagagcaacagaaaccagtgatgatgacctc
atcccatttggagaccgaccaacagtatctcggtttggtgccatctctcgaacttccaaa
acaatatatcagggtgctggcccaatgcaggctatggcacctcagggagctcccacaaaa
tctattaatatttcagattacagtccatatggaacccatggtggctggggaggttctccc
tactcacctcatcaaaacataccttctcagggacacttcagtgaaagggagagaatatcc
atgtcagaagtggccagtcatggcaaaccccttccatctgctgacagggaacagctacga
ctagaattgcagcagctaaaccatcaaattagccaacagacccagctacgtggactagag
gctgttagtaacaggctggtgttgcagagggaggtgaacaccctggcagctcagtcacag
ccaccaccaccacctccaaaatggcctggaatgatctcaagtgagcagttgagcttggaa
ctgcaccaggtggaaagggaaatcgggaagagaacccgggaactgagtttggagaaccag
tgttctctggatatgaaaagcaaattgaatacaagtaagcaagcagaaaatggacaacca
gaaccacaaactaaggttacaactgaggatcttacattgacattcagtgatgtgccgaat
gggtcagccttgacacaagagaatatcagcctcctatcaaacaagaccagctctctgaac
ctatcagaggaccctgagggaggaggagacaacaatgactcccagagatcaggagttaca
cccagttctgctccctaa
DBGET
integrated database retrieval system
