Myotis yumanensis (Yuma myotis): 138996059
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Entry
138996059 CDS
T10762
Symbol
SMG5
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5 isoform X1
KO
K11125
protein SMG5
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138996059 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myum03019
]
138996059 (SMG5)
03032 DNA replication proteins [BR:
myum03032
]
138996059 (SMG5)
Messenger RNA biogenesis [BR:
myum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138996059 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
138996059 (SMG5)
DNA replication proteins [BR:
myum03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
138996059 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
138996059
NCBI-ProteinID:
XP_070253069
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MSQGPAAGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGD
LSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQ
SEVSFEGAYGNLKRLFDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVNFMYLQSLLQP
KSSSVDSELTALCQSVLEDFNLCLFYLPSSPNLSLASEDEEEYESGYAFLPDLLIFQMVI
ICLMGVHSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGTDE
PESKEPLEKEEEPPPIAPQVGEVRKNRKFSRLSCLRRRRRHRHLPKAGDDSDLSEGFESD
SSHDSARNSEGSDSGSDKSLEGGETAFDAETDSEMNSQESRSDLEDMEDEEGTRSPALEP
PRAKSEAPESLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLPQPTADPHTL
ASHRPCVNGDVDKPSEPASEEGSESEASESSGHSCRNERSIQEKLQVLMAEGLLPAVKVF
LDWLRTNPDLIIVCAQSSQSLWNRLSVLLNLLPAAGELQESGLALCPEVHGLLEGCELPD
LPSSLLLPEDMALRNLPPLRAAHRRFNFDTDRPLLSTLEESVVRICCIRSFGHFVARLQG
SILQFSSEVGIFVSTAQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQLE
GSLQQPKAQSAMSPYLVPDTQALCHHLPIIRQLATSGRFIVIIPRTVIDGLDLLKKEHPG
ARDGIRYLEAEFKKGNRYIRCQKEVGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQGA
GSPAGRCACQCGHQECPGLLQAVEGDWLRLIPKPCSGADSRSLLPSLAAGTTTCSHPTTD
SRTHSGRKPSCTQAEGGPRSQLGGWAPPVAKTTSGSEESIWSRRGLWAPSQPSCLNPPAV
PRGGWQAWVSEFHWRDSWTSEGKGCRRGPSSPKMGGGWARSLDPPVLGKRRQHQVSGWFS
ADPALLRDHPFSFPLVGPGQLWSFGDSSRRGAWSWLHWQGAGLASLPCCWGCTPSSPLLL
SLCLASRAGSRPHQLWAVWPVCQGGVLVPTSPTVTVLCALGCCAATVGCQ
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggccccgccgcaggggagagcagcgaacccgaagcaaaagtccttcacact
aagcggctttaccgggctgtcgtggaggctgtgcatcgactggacctcatcctttgcaac
aaaaccgcttatcaagaagtgttcaaaccagagaacattagcctgaggaacaagctgcgt
gagctctgcgtcaagcttatgttcctgcacccagtggactatgggaggaaggctgaggag
ctgctatggagaaaggtatactatgaagttatccagcttatcaagactaacaaaaagcat
atccacagccggagcaccttggaatgtgcctacaggacacacctggtggctggcattggc
ttctaccagcatcttcttctctatatccagtcccactaccagcttgaactgcaatgctgc
atcgactggacccatgtcaccgaccccctcataggatgcaagaagccagtgtctgcttca
gggaaggagatggactgggcacagatggcatgccaccgatgtctagtgtacctgggcgat
ttgtcacgatatcagaatgaattagctggcgtagacaccgagctgctcgctgagagattt
tactaccaagccctgtcagtagctccccagattggaatgcccttcaaccagctgggcacc
cttgcgggcagcaagtactataatgtggaagccatgtactgctacctgcgctgcatccaa
tcagaagtgtcctttgagggggcctatgggaacctcaagaggctgtttgacaaggcagcc
aaaatgtaccaccagctgaagaagtgtgagactcggaaactctctcccagcaagaagcga
tgtaaagacattaagaggttgctggtgaactttatgtatctgcaaagcctcctgcagccc
aaaagcagctccgtggactcagagctgacagcgctttgccagtcagtcctggaggacttc
aacctctgtctcttctacctgccctcctcacccaacctcagcctggccagtgaggatgag
gaggagtatgagagcggatacgctttcctcccggaccttctaatctttcaaatggtcatc
atctgccttatgggtgtgcatagcttgaagagagcaggatccaagcagtacagtgcagcc
attgcctttaccctggccctcttctctcacctcgtcaatcatgtcaacatacggctgcag
gctgagctggaagagggggaaaatcccgtcccggcgttccagagtgatggcacagatgaa
ccagagtccaaggaacccttagagaaggaggaagagcctcctcccatagcacctcaagtg
ggcgaggtcaggaagaatcggaagttctcccgcctctcttgcctccgccgtcgccgccgc
caccgccacctgcccaaagctggtgatgatagtgacctgagtgagggctttgaatctgac
tcaagccatgattcggcccggaacagtgagggctcggacagtggctccgacaagagtctt
gaaggtggggagacagcctttgatgctgagacagactcggaaatgaacagccaagagtcc
cgatcagacctggaagacatggaggatgaggaagggacccggtccccagccctggagccc
cctcgggctaagtcggaggctcctgaatccctcaatggccctctgggccccagtgaggct
agcattgccagcaatctacaagccatgtccacccagatgttccagaccaagcgctgcttc
cgactggcccccaccttcagcaacctgctcccccagcccaccgctgaccctcacaccttg
gccagccacaggccctgtgtcaatggggatgtggataagccctcagagccagcctctgag
gagggatctgagtcagaggcgagtgagtccagtgggcactcctgtcggaatgagcgcagc
atccaggagaagctgcaagtcctgatggctgaaggcctgcttcctgctgtgaaagtcttc
ctggactggctgcggaccaaccccgacctcatcattgtgtgtgcacagagctctcaaagt
ctgtggaaccgcctctctgtgttgttgaatctgttgccagctgctggcgaactccaagag
tctggcctagccctgtgtcctgaggtccatgggcttcttgaaggttgtgaactgcctgac
ctcccctctagcctgctgcttccagaggacatggcacttcgcaacctgcctcccctccgg
gctgcccacagacgctttaactttgacacggatcggcccctgctcagcaccttagaggag
tcggtcgtgcgaatctgctgcatccgcagctttggccacttcgtcgcccgcctacaaggc
agcatcctgcagttcagctcggaggtcggcatcttcgtcagcacggcgcagtctgagcag
gagagcctgctgcagcaggcccaggcccagttccgcatggcgcaggaagaagctcggcgg
aacagacttatgagagacatggcccagctgcgacttcagctcgaggtctctcagctggaa
gggagcctacagcagcccaaggcccagtcagcaatgtcaccctacctcgtccctgacacc
caggccctctgccaccacctccccatcatccgccagctggctaccagtggccgcttcatt
gtcatcatcccaaggacagtgatcgatggcctggatttgctgaagaaggaacacccaggg
gcccgggatgggatccgatacctagaggcagagtttaaaaaaggaaacaggtacattcgc
tgccagaaagaggtggggaagagctttgagcgacataagctgaagagacaggatgcagat
gcctggaccctctataagatcctggacagctgcaaacaactgactctagcccagggggca
ggcagccctgcaggccgctgcgcatgccagtgtggacatcaagaatgtcctggacttcta
caagcagtggaaggagattggttgagactgattcccaagccctgcagtggggctgactcc
agatctctcctgccctctctggctgctgggaccaccacctgtagtcaccccaccacagac
tcccgcacgcactcaggaaggaagcccagctgcacacaggctgagggagggcccaggagc
cagctgggagggtgggcaccccctgttgccaagacgacgtcaggaagtgaggaaagtatt
tggagcaggagaggcctgtgggcccctagtcagccttcctgcctcaaccctcctgctgtc
cccagaggcgggtggcaggcgtgggtgtctgagtttcactggcgtgattcctggacctct
gaggggaagggatgcagaagaggcccttcctcacctaagatggggggtggttgggctagg
agtttggaccctccagtcctggggaagaggaggcagcaccaggtatctgggtggttttct
gcagaccctgccctcctcagagaccacccgttctcatttccccttgtggggcctgggcag
ctctggagctttggggactcttcaagaagaggggcctggagctggctgcactggcagggg
gccgggcttgcatccctcccgtgctgctggggctgcacacccagttccccacttctgctc
tccctctgcctagcttcccgggcagggagcaggcctcaccagctgtgggcagtctggcct
gtgtgccaggggggtgttcttgtgcccaccagtcccacagtcaccgtgctttgtgctctt
ggttgctgtgctgcaacagtgggatgccagtaa
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integrated database retrieval system
