KEGG   Myotis yumanensis (Yuma myotis): 139001954
Entry
139001954         CDS       T10762                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
myum  Myotis yumanensis (Yuma myotis)
Pathway
myum03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:myum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    139001954 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:myum03400]
    139001954 (TDP1)
DNA repair and recombination proteins [BR:myum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     139001954 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 139001954
NCBI-ProteinID: XP_070259547
LinkDB
Position
Unknown
AA seq 610 aa
MSQEGDYGRWTISSSDESEEEKAKPDKLSTSLLHAGQEAACEPRYTCSEARKAAHRRKMS
PLKFSSTDGVSEVSPPKKQKSGSQEDLGWCLSSSDDELPPETQLTAPDKVALKEEKGVSP
PTQSAAPRAGSHGPPARPTLTEDEDEYETSGEGQDIWDMLDKGNPFQFYLTRVSGIKPKY
NSGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVRQYPREFRKKPILLVHGDKREAKARL
HSEAKPYQNISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQKTQGMWV
SPLYPRMAHGTHGSGESTTHFKADLISYLIAYNAPPLQEWVDVIHAHDLSETNVYLIGST
PGRFQGNQKDNWGHFRLRKVLKEHASSIPKAEAWPVVGQFSSIGSMGADESKWLCAEFKE
TLVTLGKESRGPGRSAAPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHAYFH
KWSAETSGRSNAMPHIKTYMRPSPDFSQIAWFLVTSANLSKAAWGALEKNGAQLMIRSYE
LGVLFLPSAFGLDSFRVKPKFFSGSQETAASFPVPYDLPPELYGSKDRPWIWNIPYIKAP
DTHGNMWVPS
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggtgattatgggagatggacgatatccagtagtgatgaaagtgaggag
gagaaggccaaaccggacaagctgtctacctctctcctccatgcggggcaggaagcagcc
tgtgagccaaggtacacctgttccgaggctcggaaagccgcccacaggaggaagatgtca
cccctgaaattcagcagcacagatggggtttcagaagtttcacctcccaagaagcagaag
agtggttcccaggaagacctgggctggtgtctctccagcagtgacgatgagctgccacca
gagacgcagctgacggcgcctgacaaagtggccctcaaagaggagaaaggcgtctcccct
cccacacaaagtgctgccccaagggctggaagtcatggccctcctgcccgccccacgctc
acggaggacgaagatgagtacgaaacgtccggggaaggccaggacatttgggacatgctg
gataaagggaaccccttccaattctacctcactagagtctcaggaattaagccaaagtat
aactctggagccctccacatcaaggatattttatctcctctatttgggacacttgtatct
tcagcacagtttaactactgttttgacgtggactggctcgtaagacagtatccacgagag
ttcaggaagaagccgatcctgctggtgcatggcgacaagcgagaagctaaggctcgcctg
cactccgaggccaagccttatcagaacatttccctctgccaggcaaagttggatattgca
tttggaacacaccacacgaaaatgatgctcctgctatacgaagaaggcctccgggtggtc
atacacacctccaacctcatccgtgaagactggcaccagaaaacgcaaggaatgtgggtg
agccccttgtacccacgaatggcccatggcacccacgggtctggagagtcgacaacacat
ttcaaagccgatctcatcagctacctgatagcctataacgctcctcccctccaggagtgg
gtagatgtcatccacgcccacgatctctccgaaaccaacgtttacctcattggatcaacc
ccaggacgctttcaaggaaatcagaaagataactgggggcactttaggcttcggaaggtc
ctgaaagagcacgcctcgtccatacctaaggccgaggcttggcccgtcgtcggccagttc
tcaagcattggctccatgggggctgacgaatccaaatggttgtgtgctgagttcaaagag
accttggtgaccctggggaaggaaagcaggggccccgggagaagcgctgctcccctccat
ctgatctatccttctgtggaaaacgtgcggaccagcttagaagggtatccagccgggggc
tctcttccctatagcatccagacagcggaaaagcagaactggcttcatgcctacttccac
aaatggtcagctgagacatctggccgcagcaatgccatgccacatatcaagacgtacatg
agaccctctccagacttcagtcagatcgcgtggttccttgtcaccagcgccaacctgtcc
aaggccgcctggggagcgctggagaagaatggcgcccagctgatgatccgctcctacgag
ctcggggtccttttcctcccgtcggcatttggcctggacagcttcagggtgaagcctaaa
ttcttctcgggcagccaggagacagcagcgtccttccctgtgccgtacgacctgcctccg
gaactgtatggaagcaaagatcggccgtggatttggaacattccttatatcaaagcccca
gacacacacgggaacatgtgggtcccgtcctga

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