Myotis yumanensis (Yuma myotis): 139003046
Help
Entry
139003046 CDS
T10762
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03082
ATP-dependent chromatin remodeling
myum04714
Thermogenesis
myum05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139003046 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
139003046 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
139003046 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
myum03000
]
139003046 (ARID1A)
03021 Transcription machinery [BR:
myum03021
]
139003046 (ARID1A)
03036 Chromosome and associated proteins [BR:
myum03036
]
139003046 (ARID1A)
Transcription factors [BR:
myum03000
]
Eukaryotic type
Helix-turn-helix
ARID
139003046 (ARID1A)
Transcription machinery [BR:
myum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139003046 (ARID1A)
Chromosome and associated proteins [BR:
myum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139003046 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
139003046
NCBI-ProteinID:
XP_070260546
LinkDB
All DBs
Position
Unknown
AA seq
2276 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAERGEMKAAAGPESEGPA
VGPPPPLGKELQDGAESNGGSGGAGGGGPGAEPDLKNSNGNAGPRPALNNNLPEPPGGGG
GGSSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPALAAL
QSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSSYPPPPQAYTLSSPRGGTPGSGAA
AAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGSSAAGGGTPQPTATPTLNQLLTSPSS
ARGYQGYPGGDYGGGPPDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSP
GSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGT
QTPQRYPMTMQGRAQNTMGGLSYAQQIPPYGQQGPGGYGQQGQTPYYNQQSPHPQQQQQP
PYSQQPPSQTPHAQPSYQQQPQSQPPQLQSAQPPYSQQPSQPPHQQSPTPYPSQQSTTQQ
QPPYSQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFG
SQASSTPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSS
QGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPAGNQMPPRP
PSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQMHTGMGSY
QQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGNMNPMGAGGQMHGQPGIP
PYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANSI
QNRPPGYPNMNQGGIMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGMAASPEMM
GLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYL
AFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSA
ASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQ
STSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTFQKRNSMTPN
PGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGL
ANVAMGPRQHYPYGGPYDRVRTEPGIGPDGNMGSTGAPQPNLMPSNPDSGMYSPSRYPQQ
QQQQQQRHDSYGNQFSTQATPSGSPFPSQQTTMYQQQQQNYKRPMDSTYGPTAKRHEGEM
YSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPTTATAATERRPA
SGPQNQFPFQFGRDRVSAPPGSSAQQNMPPQMMGGPIQASAEVAQQSTMWQGRNDMTYNY
ANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAPVPAMTRPP
PSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPA
PVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWAL
DTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPG
RCSKVSSPVPVEGEDEEDLLGPKLEEKEEEEVVENDEEMAFSSKDKAASENSEEKLISKF
DKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLPTR
PHVPCLPVTRKHVTAAEGTSGTTEQKGPPPDGPPEKRITATMDDMLSTRSSTLTEEGAKS
AEAPKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIR
SLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWW
WDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPN
AVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVV
LLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVD
MMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcggcg
gcagcggccgagcgcggggaaatgaaggcagccgccggcccggagagcgaaggccccgcc
gtggggccgccgccgccgctgggaaaggagctgcaggacggggccgagagcaacgggggc
agcggcggagccggcggcggagggcccggcgcggagccggacctgaagaactcgaacggg
aacgcgggcccgaggcccgccctgaacaataacctcccggagccgcccggcggcggcggc
ggcggcagcagcagcgacggggtgggggcgcctcctcactcagccgcggccgccctgccg
ccccccgcctacggcttcgggcagccctacggccggagcccgtctgccgtcgccgccgcg
gcggccgccgtcttccaccaacaacatggcggacaacaaagccctgccctggcagcgctg
cagagcggcggcggcgggggcctggagccctacgcggggccccagcagaactcgcacgac
cacggcttccccaaccaccagtacaactcctactaccccaaccgcagctcctaccccccg
cccccccaggcctacacgctgagctccccgagaggtggcactccgggctccggcgcggcg
gcggccgccggctccaagccgcctccctcctccagcgcctccgcctcctcgtcgtcttcg
tccttcgctcagcagcgcttcggggccatggggggaggcggctcctccgcggccggcggg
ggaaccccccagcccaccgccacccccaccctcaaccaactgctcacgtcgcccagctcg
gcccggggctaccagggctaccccgggggcgactacggcggcgggcccccggacggcggc
gccggcaagggcccggcggacatggcctcgcagtgctggggggctgcggcggcggcggcg
gcggcggcggccgcctcgggaggggcccaacaaaggagccaccacgcgcccatgagccct
ggcagcagcggcggcgggggtcagcccctcgcccggaccccgcagccatccagtccgatg
gatcagatgggcaagatgagacctcagccatatggtggaactaacccatactcacaacaa
cagggacctccgtcaggaccgcagcaaggacacgggtacccagggcagccatatgggacc
caaaccccacagcggtacccgatgaccatgcagggccgggcacagaataccatgggcggc
ctctcttatgcacagcagattcctccttatggacaacaaggccccggtggatatggtcaa
cagggccagactccatattataaccagcaaagtcctcacccccagcagcagcagcagcca
ccctactcccagcaaccaccatcccagacacctcatgcccaaccttcatatcagcagcag
ccacagtctcagccaccacagctccagtccgctcagcctccatattcccagcagccatcc
cagcctccacatcagcaatctccaactccatacccctcccaacagtctacaacccagcag
cagcccccctactcacaggcacagtctccctaccagcagcagcaacctcagcagccagca
tcctcgacactctcccagcaggctgcataccctcagccccagtctcagcagtcacagcaa
actgcctattcccagcagcgcttccctccaccacaggagttatctcaagattcatttggg
tctcaggcatcctcaaccccctcaatgacctccagtaagggaggacaagaagatatgaac
ttgagtcttcagtcaagaccctcgagcttgcctgatctgtctggttcaatagatgatctc
cccatggggacagaaggagctctgagccctggagtgagcacatcagggatttccagcagc
caaggagagcagagtaatccagctcagtctcctttttctcctcatacttcccctcacctg
cctggcatccgaggcccatccccgtcccctgttggctctcccgccagtgttgctcaatct
cgctcaggaccactctcgcctgctgcagtgccagcaggcaaccagatgccacctcggcca
cccagtggccagtcggacagcatcatgcatccttccatgaaccaatcaagcattgcccaa
gatcgaggttacatgcagaggaacccccagatgccccagtacagttcaccccagcccggc
tcggccttatctccgcgtcagccttctggaggacagatgcacacaggcatgggctcctac
cagcagaactccatggggagctatggtccccaggggagtcagtatggcccacaaggaggc
taccccaggcaaccaaactataatgccttgcccaatgctaactaccccagtgcaggcatg
gctggaaacatgaaccctatgggtgctggaggccagatgcatgggcagcctggtatcccg
ccttatggcaccctccctccagggagaatgagtcatgcctccatgggcaaccggccttat
ggccctaacatggccaatatgccacctcaggttgggtcagggatgtgtcccccaccaggg
ggcatgaaccggaaaactcaagaaactgctgtcgccatgcatgttgctgccaactctatc
caaaacaggccaccaggctaccccaatatgaatcaagggggtataatgggaactggacct
ccctatggacaagggattaatagtatggctggcatgatcaaccctcagggacctccatat
ccaatgggtggaaccatggccaacaattcagcagggatggcagccagcccagagatgatg
ggccttggagatgtcaagttaactccagccaccaaaatgaacaacaaggctgatgggaca
cccaagacagaatccaagtctaaaaaatccagttcttctactacaaccaatgagaagatc
accaagttgtatgagctgggtggtgagcctgagaggaagatgtgggtggaccgttatctg
gccttcacggaggagaaggccatgggcatgacaaatctgcctgctgtgggtaggaaacct
ctggacctctatcgcctgtatgtgtctgtgaaggagattggtggattgactcaggtcaac
aagaacaaaaaatggcgggaacttgcgaccaacctcaatgtcggcacctcaagcagtgct
gccagctccttgaaaaagcagtacatccagtgtctctatgcctttgagtgtaagattgaa
cgtggagaagatcctcccccagacatctttgcagctgctgattccaagaagtcccagccc
aagatccagcctccctctccagctggatcagggtctatgcagggaccacagacacctcag
tcaaccagcagttccatggcagaagggggagacctgaagccaccaactccagcatctaca
ccacatagtcagatccctcccttgccaggcatgagcaggagcaattcagtcgggattcag
gatgcttttcctgatggaagtgaccccacattccagaaacggaattccatgactccaaac
cctgggtaccagcccagtatgaatacctctgacatgatgggtcgcatgtcctatgagcca
aataaggatccttatggcagcatgaggaaagctccagggagcgatcccttcatgtcctca
gggcagggccccaacggcgggatgggggacccttacagccgagctgccggccctgggcta
gcaaatgtggcaatgggaccacgacagcactatccttatggaggtccttatgacagagtg
aggacggagcctggaataggacctgatggaaacatggggagcactggagccccacagccg
aatctcatgccttccaacccagactcggggatgtattctcctagccgctacccccaacag
cagcagcaacagcagcaacgacatgattcctatggcaatcagttctccacgcaagccacc
ccttccggcagccccttccccagccagcagaccacaatgtatcagcagcagcagcagaat
tacaagcggccgatggatagcacatacggccctactgccaagcggcacgaaggggagatg
tacagtgtgccatacagcactgggcaggggcagccccagcagcagcagttgccgccagcc
cagccccagcccgccagccaacaacaagctgcccagccttcccctcagcaagatgtgtac
aaccagtatggcaatgcatatcctaccactgccaccgctgctactgagcgccggccagca
agtggcccccagaaccagtttccattccagtttggccgagaccgtgtctcggcaccccct
ggctccagtgcccagcagaacatgccaccacaaatgatgggtggccccatacaggcatct
gctgaggttgctcagcaaagcaccatgtggcaagggcgtaatgacatgacctacaattac
gccaacaggcagagcacgggctctgccccccagggccctgcctatcatggtgtgaaccga
acagatgaaatgctgcatacagatcagagggccaaccatgaaggctcatggccttcccat
ggcacacgccagcctccatatggtccctctgctcccgtgcccgccatgacaaggccccct
ccttccaactaccagcccccaccaagcatgcagaatcacattcctcaggtatccagccct
gctcccctgccccggccaatggagaaccgcacctctcctagcaagtctccattcctgcac
tctgggatgaagatgcaaaaggcaggcccccccgtacctgcctctcacatagcacctgcc
cctgtgcagccccccatgattcggcgggacatcaccttcccacctggctctgttgaagcc
acacagcctgttttgaagcagaggaggcgactcaccatgaaagacatcggaactccagag
gcatggcgggtaatgatgtccctcaagtctgggctgctggcagagagcacatgggcatta
gacaccattaacatcctgctgtatgatgacaacagcatcatgaccttcaacctcagtcag
ctcccagggttgctagagctccttgtggaatatttccggcgttgcctgattgagatcttt
ggcattttaaaggaatatgaggtgggtgacccagggcagagaacactactggaccctggg
agatgcagcaaggtgtctagtccagtccctgtggagggggaggatgaggaagaccttcta
ggtcctaaactagaagagaaagaagaagaggaagtagttgaaaatgatgaggagatggcc
ttttcaagcaaagacaaggcagcctcagagaatagtgaggagaaacttattagtaagttt
gacaagcttccagtaaagatcgtgcagaagaatgacccgtttgtggtggactgctcagat
aagcttgggcgtgtgcaggagtttgacagtggcctgctgcactggcggattggtgggggg
gacaccactgagcatatccagacccactttgagagcaagacagagctgctgccgacccgg
cctcatgtgccctgcctaccagtcacccggaagcatgtcacagcagcagagggtacttca
gggacaacagaacagaagggccccccacctgatggccctccagaaaaacggatcacagcc
actatggatgatatgttgtccacccgatctagcacgttgactgaggagggagctaaaagt
gcagaggctcccaaggagagcagcaagtttccatttggcatcagcccagcacagagccac
cggaacatcaagatcctagaggatgaaccccacagtaaagatgagaccccactgtgtacc
cttctggactggcaggattcccttgccaagcgctgcgtctgtgtctccaataccatccga
agcctgtcatttgtgccaggtaacgactttgagatgtccaaacacccagggctgctgctg
atcctgggcaagctgatccttctacaccataagcatccagaacggaagcaggcaccacta
acttatgagaaggaggaggagcaggaccaaggggtgagctgcaacaaagtggagtggtgg
tgggactgcttggagatgctccgggaaaacaccttggtcacactagccaacatctcgggg
cagttggacctctccccgtaccctgagagcatttgtctgcctgtcctggatggactccta
cactgggcagtctgcccctcagctgaagcccaggaccccttctccaccctgggccccaat
gccgtcctctctccccagagactggtcttggaaaccctcagcaaactcagcatccaggac
aacaatgtggacctgatcctggccacaccccccttcagccgcctggagaagttgtatagc
accatggtgcgcttcctcagtgaccgaaagaacccagtgtgccgggagatggccgtggta
ctgctggccaacctggcgcagggagacagcctggcagcccgtgccatcgccgtgcagaag
ggcagcatcggcaacctcctgggcttcctggaggacagccttgctgccacgcagttccag
cagagccaggcgagcctgctccacatgcagaaccccccctttgagccaactagtgtggac
atgatgcggcgggctgcccgtgcgctgctggccctggccaaggtggacgagaaccactca
gagttcacgctgtatgagtcacggctgttggacatctcggtctcaccattgatgaactca
ttggtttcacaagtcatttgtgatgtactgtttttgattggccagtcatga
DBGET
integrated database retrieval system
