Myotis yumanensis (Yuma myotis): 139005569
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Entry
139005569 CDS
T10762
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum04151
PI3K-Akt signaling pathway
myum04510
Focal adhesion
myum04512
ECM-receptor interaction
myum04974
Protein digestion and absorption
myum05165
Human papillomavirus infection
Brite
Glycosaminoglycan binding proteins [BR:
myum00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139005569 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
139005569
NCBI-ProteinID:
XP_070263897
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAVGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKLGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPSGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGAPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGETGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGGREKGPDPMQYMRADQAAGNLRQHDVEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctaacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
accgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
ccccctgggcctcagggacctgccggtgaacaaggacccagaggtgatcgtggcgacaaa
ggtgaaaaaggtgcccctggacctcgtggcagagatggagagcctgggacccctggaaat
cctggcccccctggccctcctggcccccctggtccccctggccttggtggaaactttgct
gcccagatggctggaggatttgatgagaaggctggtggcgcccagatgggagtaatgcaa
ggaccaatgggccccatgggaccgcgaggacctccaggccctgctggtgctcccggacct
caaggatttcaaggcaaccctggtgaacccggggaacccggcgtctctggtcccatgggt
ccccgtggtcctccgggcccccctggaaagcctggtgacgatggcgaagctggaaagcct
ggaaaatctggtgaaagaggccctcccggccctcagggtgctcgcggcttcccaggaacc
ccaggacttcctggtgtcaaaggtcacagaggttacccaggcctggatggtgctaagggc
gaagctggtgccccgggtgtgaagggcgagagtggctcccctggtgagaatggttctcca
ggccccatgggtccccgtggtctgcctggtgagagaggacggactggccctgcaggcgcc
gtgggtgcccggggcaatgatggtcaaccaggccctgcagggcctccgggtcccgtgggt
cctgctggcggtcctggcttccctggggctcccggtgccaagggtgaagctggtcccacc
ggtgctcgtggtcctgaaggcgctcaaggtcctcgcggtgaacctggcactcctgggtcc
cctgggccggctggtgcctctggcaaccctggaacagatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgctcccggcttccctgggccccggggtcctcct
ggccctcaaggtgcaactggtcctttgggcccgaaaggtcagacgggtgagcctggtatt
gctggcttcaaaggcgaacaaggccccaagggagaaactggccctgccggcccccaggga
gcccctggtcctgctggtgaagaaggcaaaagaggtgcccgtggagagcctggtggtgct
gggcccatcggcccccctggagaaagaggtgctcctggcaaccgtggtttccctggtcaa
gatggtctggccggtcccaagggagcccctggagagcgagggcccagcggccttgctggc
cccaagggagccaacggtgaccctggccgtcccggagagcctggccttcctggagctcgg
ggtctcactggccgtcctggtgatgctggtcctcaaggcaaacttggtccttctggagcc
cccggtgaagacggtcgccccgggcctcccgggccgcagggggctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaacggcgagcctggcaaagctggtgagaaa
ggactgcccggtgctcctggtctgagaggtcttcctggcaaagatggtgagacaggtgct
gcaggcccccctggacccgcgggaccttcaggtgaacgaggcgagcagggtgctcccgga
ccatctggcttccaggggcttcctggccctcccggtcccccaggtgaaggtggaaaacca
ggcgaccagggcgttcccggcgaagctggagcccccggcctcgtgggtcccagaggtgaa
cgaggtttcccaggtgaacgtggctctcctggtgcccagggcctccagggtccccgtggc
ctccccggcactcccggcactgatggtcccaaaggtgcatctggcccagctggcccccct
ggggctcagggccctccaggtctgcagggcatgcccggtgagaggggagcagctggtatt
tctgggcccaagggagacaggggtgatgttggtgagaaaggcccagagggagcccctggg
aaggacggtggacgaggtctgacaggtcccattggccctcctggcccggcgggtgccaac
ggtgagaagggagaagttggccctcctggtcctgcgggaacagctggtgctcgaggtgcc
ccgggtgaacgtggagagaccggacctcctggacccgctggattcgctggtcctcccggt
gctgatggccagccaggcgccaagggtgagcaaggagaggccggccagaaaggcgacgct
ggtgcccccgggccgcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccccccgggagccacaggattccccgga
gctgctggccgcgtcggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggcccccccggccga
gccggtgaccccggcctccaaggtcctgccggagcccctggcgagaagggagagcctgga
gatgacggtccctctggtcccgatggtcctccaggcccccagggtctggctggtcagagg
ggcatcgttggtctgcccggacagcgtggtgagagaggattccccggcctgcccggccca
tcgggcgagcctggcaagcagggagctcctggtgcatctggagaccgaggtccccccggc
cccgtgggtccccctgggctgactggtcccgctggtgaacccggacgagagggaagccct
ggcgctgacggcccccctggcagagatggtgcagctggagtcaagggcgatcgtggtgag
acaggtcccctgggtgctcctggagcccctgggccccctggttctccgggccccgctggc
ccaactggcaagcagggagaccgaggagaagctggcgcacaaggccccatgggccccgca
ggaccagctggagcccgtgggatcccaggccctcaaggcccccgaggtgacaaaggagag
actggagaggctggcgagaggggactgaagggacaccgtggcttcactggtctgcagggt
ctccccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccccgtcggtccctctggcaaagatggctctaatggaatc
cctggccccattggacctcctggtccccgtggacgttctggcgaaacaggccccgctggt
cctcctggaaatcctggaccccctggccctccaggtccccccggccctggcattgacatg
tcagcctttgctggcttaggcgggagagaaaaaggccccgaccccatgcagtacatgcgg
gccgatcaggcagccggcaatctgaggcagcatgacgtggaggtggatgccacgctcaag
tccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaaccccgct
cgcacctgccgggacctgaaactctgccacccagaatggaagagtggagactactggatc
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgtgtctaccccaacccagcgaacgttcccaagaagaactggtggagcagcaag
agcaaagacaagaaacatatctggtttggagaaaccatcaacggtggcttccacttcagc
tacggggatgacaacctggctcccaacactgccaacgtccagatgaccttcctgcgcctg
ctgtccactgaaggctcccagaacatcacttaccactgcaagaacagcatagcctacctg
gacgaagcagctggcaacctcaagaaggccttgctcatccagggttccaatgatgtggag
atccgggctgagggcaacagcaggttcacgtatacagtgctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgcctc
cccatcattgacattgcacccatggacataggagggcccgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
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