Myotis yumanensis (Yuma myotis): 139007038
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Entry
139007038 CDS
T10762
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03082
ATP-dependent chromatin remodeling
myum04714
Thermogenesis
myum05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139007038 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
139007038 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
139007038 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myum03021
]
139007038 (SMARCC2)
03036 Chromosome and associated proteins [BR:
myum03036
]
139007038 (SMARCC2)
Transcription machinery [BR:
myum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139007038 (SMARCC2)
Chromosome and associated proteins [BR:
myum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139007038 (SMARCC2)
PBAF complex
139007038 (SMARCC2)
GBAF(ncBAF) complex
139007038 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
139007038
NCBI-ProteinID:
XP_070266111
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDRNSASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEAPKKDEEKGKEGDSEKE
SEKSEGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPTVHGLAMA
PASVAPAPASSGVPPGSLGPSEQIGQTGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINL
PPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacg
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgacttccagaacccatcacgcatggaccgcaac
gtggaaatgttcatgaccatcgagaagtccttggtgcagaataattgcctgtctcgacca
aacattttcctgtgccccgaaattgaacccaaactgctaggaaaattaaaggacattatc
aagagacaccagggaacggtcactgaggataggaacagtgcatcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtgcgaccagtcatgaagcgggacaagcag
gttcttctgcactggggctattaccctgacagttacgacacgtggatcccagccagtgaa
attgaagcgtctgtggaagatgctccgactcccgagaagcctcggaaggttcatgcgaag
tggatcctggacacagacaccttcaatgaatggatgaatgaggaagactacgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacactgacagatgag
gtaaacagcccagattcagatcgacgggacaagaagggggggaactataagaagaggaag
cgctccccctctccttcaccaaccccagaagctaagaagaaaaatgctaagaaaggtccc
tcaacaccttacaccaagtccaagcgtggccacagagaagaggagcaagaagacctaaca
aaggacatggatgagccctcaccagtccccaacgtagaagaggtgacattgcccaaaaca
gtcaacactaagaaggactcggagtcagccccggtcaaaggaggcaccatgactgacttg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggatgaaaacagtacg
gggaacaagggggagcagaccaagaacccggacctgcatgaggacaatgtgactgagcag
acccaccacatcatcatccccagctatgcagcctggttcgattataatagtgttcatgcc
attgagcggcgggctctccctgagttcttcaacggcaagaacaagtccaagactccagaa
atctacctggcctaccgaaacttcatgattgacacttaccggctgaacccccaggagtat
ctcacctctaccgcctgccgcaggaacctggcgggcgatgtctgtgccatcatgagggtc
cacgccttcctagagcagtggggtcttataaactaccaggtggatgctgagagtcgacca
accccaatgggacctccacccacctctcacttccatgtcttagcggacacgccctcaggg
ctggtgcctctgcaacccaagaccccacagggccgccaggttgatgctgataccaaggct
gggcgcaagggcaaagagctggatgacctggtgccagagaccgctaagggcaagccagag
ctgcagacctctgcttcccaacaaatgctcaacttccctgacaaaggcaaagagaaacca
acagacatgcagaactttgggctacgcacagacatgtacacaaagaagaacgttccctcc
aagagcaaagctgcggccagtgccacgcgagagtggacggagcaggagaccctgcttcta
ctggaggctctggaaatgtacaaagacgactggaacaaagtgtctgagcatgtgggaagc
cgcacgcaggacgagtgcatcttgcattttcttcgtcttcccattgaagacccgtacctg
gaggactcggaggcctctctgggccccttggcctaccagcccatccctttcagtcagtca
ggcaaccccgtcatgagcactgtcgccttcctggcctccgtcgtcgatcctcgagtcgcc
tctgctgctgcaaagtcggctctagaggaattctctaaaatgaaggaagaggtacccaca
gccttggtggaggcccatgttcggaaagtggaggaagcagccaaagtgacaggcaaggcg
gacccagccttcggtctggaaagtagtggtattgccggaaccacctctgatgagcctgag
cggattgaggagagcgggactgacgaggcacgggcggagggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggagttggggctgtggaggaagaagcaaaagagaag
actagcgaggctcccaagaaagatgaagagaaagggaaagaaggcgacagtgagaaggag
tcagagaagagtgaaggggaccccatagttgaccctgagaaggagaaggagccaaaggag
gggcaggaggaagtgctgaaggaagtggtggagtcagagggggaaaggaagaccaaggtg
gagagggacatcggtgagggcaatctctccaccgctgctgctgctgccctggccgctgcc
gctgtgaaggccaagcacttggctgctgttgaggagaggaagatcaaatctctggtggcc
ctgctagtggagacccagatgaaaaagctggagatcaaactccggcactttgaggaactg
gagacgatcatggaccgggagcgagaagcactggagtatcagaggcagcagctcctggcc
gacaggcaagccttccacatggagcagctgaagtatgcggagatgagggctcggcagcag
cacttccagcaaatgcaccagcagcagcagcagccacctccagccctgcccccaggctcc
cagcctatcccaccgacaggcgctgctgggccacccacagtccatggcttggcgatggct
ccggcttctgtggcccctgctcctgctagcagtggggtccctcctggaagcttgggcccc
tctgaacagattgggcagacagggtcaactgcagggccacagcagcaacaaccagccgga
gccccccaacctggggcagtcccaccaggggttccaccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcctgctccatccatcatcccatttggtagtctagccgactccatcagtattaacctt
ccccctcctcctaacctgcatgggcatcaccaccatctcccgttcgccccgggcactctc
cccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgacc
accaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagac
ccaggcacccccctgcctccagaccccacagccccgagcccaggcacggtcacccctgtg
ccacctccacagtga
DBGET
integrated database retrieval system
