Myotis yumanensis (Yuma myotis): 139008194
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Entry
139008194 CDS
T10762
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56 isoform X1
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
myum Myotis yumanensis (Yuma myotis)
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
myum04121
]
139008194 (TRIM56)
Enzymes [BR:
myum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139008194 (TRIM56)
Ubiquitin system [BR:
myum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139008194 (TRIM56)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
RING_XB3-XBAT31
GxGYxYP_N
Motif
Other DBs
NCBI-GeneID:
139008194
NCBI-ProteinID:
XP_070267613
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MDRELRRPEENSWPSSMMSQGSSPSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQDC
LAQLAEGGHLRCPECRETVPVPPAGVAAFKTNFFVNGLLDLVRARAGGDLHAGKPACALC
PLMGGASAGGPATARCLDCADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARER
QAAQCPQHPGEALRFLCQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVD
KNLAELEAARMVEKEALARLREQTTRVGTQVEEAAAGLLRALLAQKKEVLGQLKAHMEAA
EEAARERLGELEGREQVARAAAAFARRVLSLGREAEILSLEGAIAQRLRQLQDCPWMPGP
APCLLPQLELHPGLLDKDSQLLWLSFENQQSQKDSGKDGTGSQGGEEAQSPREDGAKMER
QGAAQPQSRDGAQTPKEDRAQPPQENGAQTPKTDRAQAPREGRSQMPQEDGEVQTAGGGR
SNKKRKFKGRLKSISREPSPAPGPNLEGSGLLPRPIFSCSFPTRMPGDKRSPRITGLCPF
GPREILVADEQNRALKRFSLNGDYKGAIPVPEGCSPCSVAALQGAVAFSAGARLYLISPD
GEVQWRRALSLSQASHAVAAMPSGDRVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRA
LVFLTTSPQGNFVGSDWQQNSVVVCDGLGQVIGEYGGPGLHGCQPGSVSVDKKGYIFLTL
REVNKVVILDPKGSLLGDFLTAYHGLEKPRVTTMVDGRYLVVSLSNGTIHIFRVRSPDS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggacagagaactcagaagaccagaagaaaattcctggccatccagcatgatgtcccag
ggatcctcaccctcccttctggaggccctgagcagcgacttcctggcctgtaaaatctgc
ctggagcagctgcgggcacccaaaaccttgccctgcttgcatacctattgccaggactgc
ctcgcccagctggccgagggcggccacctccgatgccctgagtgccgcgagaccgtgcca
gtgccaccagccggcgtggccgccttcaagaccaacttctttgtcaatgggctcctggat
ttggtgagggctcgggctggtggagacctgcacgcaggaaagccagcctgtgcgctgtgc
cctctgatggggggtgccagtgccggggggccagccacagcccggtgcctagactgtgct
gatgacctgtgccaggcctgtgccgatgggcaccgctgcacccgacagactcacacccac
cgagtggtggacctggtgggctacagggcagggtggtatgacgaggaggcccgggagcgc
caggcagcccagtgcccccagcacccaggagaggccctgcgcttcctgtgccagccctgt
tcccagctactgtgccgtgagtgtcgcctggatccccacctggatcacccctgcctgccc
ctggctgaagctgtgcgtgcccgaagaccaggccttgaggagttactagcaggtgtggac
aagaacctggccgagctagaggctgcccggatggtggaaaaggaagccttagcccgcctg
cgggagcaaacgaccagggtggggacacaggtggaggaggctgctgcggggcttctccgg
gccctcctggcccagaagaaggaggtgctggggcagctaaaggcccacatggaggctgcc
gaggaggctgctcgggaaaggctgggagagctggagggccgggagcaggtggcccgggct
gccgctgcctttgcccgtcgggtgctcagcctcggtcgcgaggccgagatcctctcgctg
gagggggcgattgcccagaggctccggcagctgcaggattgtccctggatgcctggacca
gccccctgtctgctgccccagctggagctccatcctgggctcctggacaaggacagccag
ctactgtggctctcctttgagaatcagcagtcccagaaggacagtgggaaagatggaact
gggagccagggaggtgaggaagcccagagccccagagaggatggagccaagatggagaga
caaggtgccgcccagccccagagtagggatggagcccagaccccaaaagaggacagagcc
cagcctccccaggaaaatggagcccagaccccaaagacagacagagcccaggccccgaga
gaaggcagatcgcagatgcctcaagaggatggagaagtccagactgcagggggcggcaga
tccaacaagaagaggaaattcaaaggcaggctcaagtccatttcccgggagcccagccct
gcgcccgggcccaacctggagggctctggcctcctccccaggcccatcttttcctgcagc
tttcccactcggatgcctggggacaagcggtctccccggatcactgggctctgtcccttt
ggcccccgggagatcctggtggctgatgagcagaacagggctctgaagcgcttctccctt
aatggcgactacaaaggcgctatacctgtccccgagggctgctccccgtgcagcgtggcc
gccttgcagggtgcggtggccttctcagctggggctcggctgtacctcataagccctgac
ggtgaggtgcagtggcgccgagcactgagcctgtcccaggccagccatgcggtggctgcg
atgccgagtggggaccgggtggctgtcagtgtgtcggggcacgtggaggtgtacaacatg
gaaggcagcctggccacccgcttcatcccggggggcaaggccaaccgaggccttcgggca
ctggtgtttctgaccaccagtccccagggcaattttgtggggtcagattggcagcagaat
agtgtggtagtctgtgatgggctgggtcaggtgattggggagtacggaggaccaggcttg
catggctgccagccaggctccgtgtctgtggataagaagggctatatttttttgaccctc
cgagaggtcaacaaggtggtgatcctggacccgaaggggtcattgctaggcgacttcctg
acggcctatcatggcctggaaaagccccgggtgaccaccatggtggacggcaggtacttg
gtcgtgtccctcagtaatgggaccatccacatctttcgggtccgctctcctgacagttaa
DBGET
integrated database retrieval system
