Myotis yumanensis (Yuma myotis): 139008816
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Entry
139008816 CDS
T10762
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
myum Myotis yumanensis (Yuma myotis)
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myum03041
]
139008816 (YTHDC2)
Enzymes [BR:
myum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139008816 (YTHDC2)
Spliceosome [BR:
myum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139008816 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
HA2_N
AAA_19
Ank_2
nSTAND3
AAA_22
ATPase
PhoH
AAA_7
AAA_16
UvrD-helicase
AAA_29
T2SSE
SRP54
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
139008816
NCBI-ProteinID:
XP_070268574
LinkDB
All DBs
Position
Unknown
AA seq
1438 aa
AA seq
DB search
MSRPSSVSPRPPAPGGGGGGGGGGGGGGGGGPAQCGPGGGARAKGLKDVRIDEEVKIAVN
IALERFRYGDQKEMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSET
AHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRL
NNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFL
LDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTF
CTNGVLLRTLMAGDSTLSAVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAA
LDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTT
LTEWYSAQENTVKPESQRQRTIPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMD
ACLSDIWLNKDVEAFAQIFHLILTENVSVDYRHSETSATVLMVAAGRGFSSQVEQLISMG
ANVHSKASNGWMALDWAKHFGQTEVVDLLESYSASLEFGNLDESSLVQTNGSDLNAEDRE
LLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFA
DNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVK
EKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLR
MPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGY
HLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFT
AGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFV
RARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGSKEKKVRFHPTSVLS
QPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLA
SNALQESSSFRADGIPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAASLLLQLRQKW
HSLFLRRMRAPSKPWSQVDEATIRAIIAALSTEEQSAGLQQPSGIGQRPRPMSSEELPLA
SSWRSNNSRKSSADTEFPDESTTAERVLMKSPSPALHPPQKYKDRGILHPKRSTDDRPDQ
ASAKSTEDYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWST
TPSNERKLNRAFWESSMVYLFFSVQGSGHFQGFSRMSSEIGKEKSQDWGSAGLGGVFKVE
WIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQIGEQLLQLWERLPSGEKTTTD
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctccccacggccgccggctcctggcggcggtggtggcggt
ggcggcggcggcggcggcggcggcgggggcggcccggctcagtgcggccctgggggcggc
gcccgggccaaggggctgaaggacgttcgcatagacgaggaggtgaaaatcgcagttaat
atcgctctggagcgcttccgatatggggaccagaaagaaatggaatttccttcttctttg
accagtacagaacgagcctttattcatcgattgagtcagtctcttggtttggtctctaaa
agtaaaggaaagggagcaaatagatacctaactgtgaagaagaaagatggatcagaaaca
gctcatgcaatgatgacctgtaatttgactcataatacaaaacatgctgttaggagccta
attcaaagatttcccgtcaccaataaagaacgtactgaacttctgcctaaaacagaaaga
ggaaatgtgtttgcagttgaagctgaaaaccgggaaatgagcaagacaagtgggcgactc
aacaatggcatacctcagattccagtgaaaagaggagaatccgaatttgattctttcagg
cagtctttgccagtgtttgagaaacaagaagaaattgttaaaataattaaagaaaataaa
gtagttttgattgtaggagaaactgggtctggaaagactacacagattcctcagttccta
ttagatgattgctttaaaaatggtatcccttgccgaatattttgtactcaaccaagacga
ttagcagctattgctgtggctgaaagagttgctgcagagagaagagaaaggattggtcaa
acaattgggtatcagatacgattagaaagcagggtttctcctaagacacttctgacattt
tgcactaatggggtattgcttcgaactttgatggcaggagatagtacattgtcagctgtg
acacatgttattgtggatgaagtacatgaaagagatcgatttagtgattttttacttaca
aagttaagagatttgttgcaaaagcatccaactttgaaactaattctttctagtgctgcc
ttggatgtaaatctctttataagatattttggaagttgtccagtgatatatatacaggga
agaccatttgaagtaaaagaaatgtttctggaagatattttaagaactactggatataca
aataaagaaatgttaaaatacaaaaaggaaaaacagcgagaagagaaacaacaaaccaca
cttacagaatggtactcagctcaagagaatactgtcaagcctgaatctcagaggcaaaga
acaattccaaatgtgactgaagagtatgatttattggatgatggtggtgatgctgttttc
agtcagttgacagaaaaagatgtgaattgccttgaaccatggttaataaaggaaatggat
gcttgtctttctgatatatggctgaataaagatgttgaggcctttgctcagatttttcac
cttattttaacggaaaatgttagtgtcgattacagacatagtgaaaccagtgcaacagtt
ctgatggttgccgcaggacgaggtttttcaagtcaagtagagcagttaattagtatggga
gccaatgtccatagcaaagcatcaaatggctggatggctttagattgggctaaacacttt
gggcagactgaagttgtggatcttctagaatcttacagtgcttcattggaatttggaaat
ctagatgaaagttctctggttcaaacaaatggaagtgacctcaatgcagaagatagagag
ctcctgaaagcttatcatcatagttttgatgatgaaaaagtagacttggatttgatcatg
catctcctgtacaatatctgccatagttgtgatgctggtgcaatattaatttttctgcct
ggatatgacgaaattgttggactgagggatcgcatcctatttgatgataagcggtttgct
gacaatacacatagatatcaagtctttatgcttcattcaaacatgcaaacatctgatcaa
aagaaagtattaaaaaacccacctgcaggtgttcgaaaaataatcctttccaccaatatt
gctgaaaccagcatcacagtcaatgatgttgtctttgttattgattctggtaaggtgaaa
gagaaatcctttgatgcactgaattttgttacaatgttaaaaatggtgtggatttccaaa
gctagtgccatacaacgaaagggcagggcagggcgatgtagacctggaatttgttttcgt
ctgttcagtagactccgattccagaatatgttggaatttcagactccagaacttttgaga
atgccattacaggaactttgtttacataccaaactgttagctccagttaattgtcctatt
gcggatttccttatgaaagctcctgaacctccaccagctttaattgtacggaatgctgta
caaatgcttaagacaatagatgcaatggatgcatgggaagatctcactgaacttggatat
catttggctgacttgccagtagaaccacatcttggtaaaatggtcctgtgtgctgttgtt
ttaaagtgtctggaccctattcttacaattgcctgcacactagcctatcgagatcctttt
gtcttgccaactcaggcctctcaaaaacgcgcagctatgctttgtaggaaacgtttcact
gctggaactttcagtgatcatatggcacttctcagagcattccaggcatggcagaaagca
cgaagtgatgggtgggagcgagccttttgtgaaaagaattttctttcacaagctaccatg
gaaataatcataggcatgagaactcaattgctcggtcaacttagagcatcaggttttgtt
agagcacgaggtggtggtgacattcgagatgttaacacaaattccgagaattgggctgtc
gttaaagctgcattggtggcaggcatgtatcctaatttagtccatgtggacagagagaat
ttagtattgacagggtcaaaggagaaaaaagtacggtttcatcccacttcagttctcagt
cagcctcaatataaaaagattcctccagccaatggtcaagctgcagcaattcaggcactg
cccacagattggcttatttatgatgaaatgaccagagcccatagaatagctaacattaga
tgttgttcagcagtgacacccgtcactgtattggtattctgtggaccagctaggttggca
agtaatgctcttcaggaatcttcatcctttcgagcggatggtattcctaatgatagtagt
gatagtgaaatggaagatagaactactgctaatctggcagctttgaaacttgatgagtgg
ctcaatttcaaactagagcctgaggccgccagtttattgctgcagctcagacagaagtgg
cacagcttatttttacgccgaatgagagctccatctaaaccgtggtctcaagttgatgaa
gcaaccattagagcaattatagctgctttaagcactgaagaacagtctgcaggtttacaa
caaccatctgggattggccaaaggccaaggcctatgtcttcagaagaacttcctttggca
tcatcttggaggtcaaataatagtaggaaaagttcagcagatactgaatttcctgatgag
tctactactgcagaaagagtattgatgaaatctccatctccagcactacatccacctcag
aagtacaaagatagaggaattttacatcctaaacgaagcactgatgaccgaccagatcaa
gcttctgcaaaatctacagaagattacccaagtccttgtgctagcccttctcctccatcc
tcaggaaaggggtcaaaatctccttcaccaagaccaaacatgcctattcgatacttcata
atgaagagtagcaatttgagaaaccttgaaatttctcaacagaagggtatttggtctaca
acccctagtaatgagcggaagctaaatcgagccttttgggaaagcagcatggtttacttg
tttttttctgttcaaggatctggacatttccagggattttctaggatgtcatctgagata
ggaaaggagaagagccaggattggggctcagctggactaggaggagtatttaaagtggag
tggatacgaaaagaaagtcttccctttcagtttgcacaccatttgctcaatccttggaat
gataacaagaaagtccagataagcagagatgggcaggaactagaacctcagattggggaa
cagttgctacagttatgggaacgccttccatcaggagaaaaaacgacaactgattga
DBGET
integrated database retrieval system
