Myotis yumanensis (Yuma myotis): 139009380
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Entry
139009380 CDS
T10762
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139009380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myum03019
]
139009380
Messenger RNA biogenesis [BR:
myum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139009380
U7-dependent histone pre-mRNA processing factors
139009380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
139009380
NCBI-ProteinID:
XP_070269770
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCEDPKNSIILTYRTT
PGTLARFLIDNPAEKVTEIELRKRVKLEGKELEEYLEREKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISMTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDPPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPNEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctctctggggttcaagaagaatctgctctttgt
tatcttcttcaagtcgatgaatttagatttttattggactgtggctgggatgagcacttt
tctatggatattatcgattccctgaggaagcacgttcaccagattgacgcggtgctgctg
tctcacccggatcctctccacctcggggccctcccgtatgcggtcgggaagttgggtctg
aactgcgccatctatgcgaccattcctgtttataaaatgggacagatgttcatgtatgat
ctttaccagtctcgacataatacagaagatttcactctgttcacgttagatgacgtggat
gcagcttttgataaaatacagcagttgaaattctctcagattgtgaatttgaaaggaaaa
ggacatggcttgtctatcacacctctgccggctggtcatatgataggtgggaccatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccctccctacttatcaca
gattcatttaatgctacatatgtgcagccgaggagaaaacagagagatgagcaacttctg
acaaatgtcctggagacacttcgcggggatggcaacgtgttgatcgcagtggacactgca
ggcagagttctggaacttgcgcagctcctcgaccagatctggcgaactaaagatgcagga
ctgggtgtctactccctggcactcctgaacaatgtcagctataatgtggtggagttttcc
aagtcccaggtagaatggatgagtgacaaattgatgagatgttttgaagacaaaagaaat
aatccgttccagttccgccatctctctttgtgtcatggtctttctgacttggcccgagta
cccagtcctaaagtggtacttgccagccagcccgacctggaatgtggattttcaagggat
ctctttattcagtggtgtgaggaccctaaaaactccatcattctaacttacagaactact
cctgggactttagcacgtttcttaattgataatcctgctgaaaaagttacagaaatagag
ttgaggaaacgggtaaagcttgaagggaaagaacttgaagaatacttggaaagagagaag
ctaaagaaagaagctgctaaaaaactcgagcagtccaaagaggccgatatagattccagc
gatgagagtgatgttgaggaagacattgaccagccttcggctcataagactaagcacgac
ctgatgatgaaaggtgaaggcagtcggaaagggagtttcttcaaacaggctaaaaagtct
tatcccatgtttcctgccccagaagagagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttggtgccagaacttcaagccactgaagaagaaaaaagcaaatta
gaatctggcttgacaaatggagatgaacccatggatcaggatttatctgatgttcccacc
aagtgtatttctatgacagaatctattgaaataaaagccagggttacttacatagactat
gaaggacggtctgatggggattccattaaaaagatcattaatcagatgaaaccccgacag
ctgatcattgtccacgggcctccagaggccagtcaggatctggccgagtgctgccgtgcg
ttcggggggaaagacattaaagtgtacatgccgaagctgcacgagaccgtggacgccacc
agcgagacccacatctaccaggtgagattaaaagactcacttgttagctcccttcagttt
tgtaaggcaaaagatgctgaactggcttggatagatggtgtcttagacatgagagtttcc
aaagtggacacaggagttattttagaagaaggagaactgaaggatgatggagaggactca
gaaatgcaagtggacccaccttcagattctagcgttatcgcccaacaaaaggccatgaaa
agtctgtttggagatgatgagaaagaaacaggtgaagaaagtgagatcattcctactttg
gaacccttgccacctaatgaggttcctggacaccagtcagtcttcatgaacgaaccaaga
ctgtctgacttcaaacaagttctcttacgggaggggatccaagctgaatttgtaggaggt
gtccttgtttgcaacaatcaagtagcagttcgtagaacggaaactggacgcatcggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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