Myotis yumanensis (Yuma myotis): 139010677
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Entry
139010677 CDS
T10762
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60 isoform X1
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
myum Myotis yumanensis (Yuma myotis)
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myum03019
]
139010677
Enzymes [BR:
myum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139010677
Messenger RNA biogenesis [BR:
myum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
139010677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Abhydrolase_11
LBD_receptor
Motif
Other DBs
NCBI-GeneID:
139010677
NCBI-ProteinID:
XP_070271543
LinkDB
All DBs
Position
Unknown
AA seq
1714 aa
AA seq
DB search
MGLEKYRMFLEEISELILSEMPKADYSSIFNDFVESEFFLIDGDSLLVMFICEESLKQGQ
ELHFFYLVERYLVDIISKGGQFAIVFFKDAEYAYFNFPELLSLRTALILHLQHNNTIDVR
TQFSGCLSQEWKNFLEESYPYFLIVADEGLNDLQTHLFNFLIIQSWSMKVNVVLSSGQAS
DVLRLYAYFMLSRHRQQTFFKQNEKKIENAYKALIKQLEGCRVLAFEPIFGNLRWNNMIE
EASEIISLLKQLWPEGSDIRHVLCVASCSLTLRMYHDFLENRKTTTSGQETNIQQEKGDC
LSLQWMEDLCKLHCLSVVFLLHLPLSQRACTRVITSDWIEDIQTFLKMRKWCEYFILNNR
NIFEFWNLNLIHLCDLSDELLLKNIAFYYENENVQGLHLNLGNEIMKDYEYLWNAVSKLV
RKFDVGKPFPLRTTQLNFLKKDPVPIKDTSKEKMPSLGFIPMSSEMVDKFVGDILKDLPF
LKRDDPIVTSLVKHKAFDELIHWHSHRPLSDDYDRAKSTFNGNPRDPYYLKSLQKFQVFQ
RFYGNSLESVSPKLIVTQDVKPKKNFSKPKTKKANETKAEIITRENRKRLLAKEEQKEES
KWSVLSHSIEEEMKENLNSGIQNLEDFLKSCKSNLVKYQVEMVGLTACLKAWKEHCRSQV
KGETTKDLSIAVQMMKRIHSLMEKYPEFLQEADRQLIARCLKYLGFDELASSLNPTEVAE
DGIKEKKKNKYSIGIGPVRFQLQYMGHFLLRDERKDPDPRVHDFIPDTWQRELLDVVDNN
ESAVIVAPTSSGKTYASYYCMEKVLKESNEGVVVYVSPTKALVNQVAATVQNRYMKNLPN
GEALCGVFTREYRHDALNCQVLVTVPACLEILLLAPHRQRWVKRIRYVIFDEVHCLGGEI
GAEIWEHLLVMIRCPFLALSATISNPEHLTEWLQSIKWYWKQADNIIEKNTASKRNAGYR
ASFHKDHFQMKQSYKVRLVLYGERYNDLEKHICSVKHNDVYFDHFHPCAALTAEHIERYG
FPSDLMLSPRETIQLYDTMFEFWKSWPRAQELCPENFIHFKNKIIIKKMDARKYEESLKA
ELTNWIKNGNVEEAKQVLRNLSPKPVSSSENMIQMFPLLIEKLRKMEKLPALIFLFKLGA
VEKCAKSVCTFLEEKQERERPPNADKEAYDMANKLRKIKKSIEKQKIIDEKSQKKPRKMD
RSLIHEAEHNSLLKILEKNLEIPPEFTYADRKTVDSELLQMVFDRVKFLRKGAELKALAE
RGVGYHHRCLFAKEKQLVEILFRKGFIRVVTATGTLALGINMPCKSVVFAQNSIYLDALN
YRQMSGRAGRRGQDLLGDVYFFDIPFPKIQKLIKSNVPELRGQFPFSITLVLRLMILASR
GDDPEDAQAKVLSVLKHSLLSFKQPKTMEMLKLYFLFSLQFLVKEGYLDQEGNPMGFAGL
VSHLHYHEPSNLVFVSFLVSGLFHNLCQPTHKGSKCFSQDVMEKLMLVLANLFGRRYIPS
KFQESTVKFYQSKVFLEDLPEDFNAALHEYNMQITKDFASFLLIVSKLADMKQEYQLPLS
KINFTGKECEDSQLVSHLMSCKEGRVAISPFVCLSGNSDGDLLQPATPSHVILRTIGISH
AQAPVLWPHRFDSQGRRMPLNAYALDFYKHGSLTGLVQDNRMNEGDAYELLKDFSLTLQS
ISVSLRELCENEDDNVVLAFEQLSKTFSEKFNKV
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgggtttagaaaaatataggatgtttttagaggaaatttcagagttaattttgagtgaa
atgccaaaagctgactattccagtatattcaacgattttgttgaatctgaattttttctc
attgatggagattcattgcttgtcatgttcatatgtgaggaatcattaaagcaggggcag
gaactccatttcttctatttggttgaacgctaccttgtggatataattagtaaaggagga
caatttgccatagttttcttcaaggatgctgagtatgcatatttcaacttccctgaactt
ctttctttgagaactgctttaattcttcatcttcagcataataacaccattgatgttcga
acacaattttctggatgcttatcacaagaatggaaaaattttttggaagagagttaccca
tatttcctgatagttgcagatgaaggcttgaacgatctacaaacacatcttttcaacttt
ttaatcattcagtcttggtcaatgaaggtcaatgttgtgctttcctcaggacaagcatct
gacgttcttcgactttatgcgtactttatgctaagcaggcacagacaacaaacgtttttc
aagcagaatgaaaagaagattgagaatgcttataaagccctgattaaacaattagaagga
tgtagggttttggcatttgaacctatttttggaaatttaagatggaacaatatgattgaa
gaggcatccgaaataatttctctgcttaagcaactctggccagaaggatctgacattcgg
catgtcctttgtgttgcttcatgctccttgactctgagaatgtaccatgactttttagaa
aacagaaagacgaccacctctggtcaggaaactaacatccaacaggagaaaggtgattgc
ttaagcctgcaatggatggaagatctgtgtaagctgcattgtctcagtgtggtttttcta
ctccatttacctctttctcaaagagcttgtaccagagtcatcacttccgattggattgag
gacattcagactttcctaaaaatgagaaagtggtgtgaatacttcatcctaaataataga
aacatttttgaattttggaatctgaatttaattcacctttgtgacttaagtgatgagctt
ttgttgaagaatattgctttttactatgaaaatgaaaatgttcaaggcctacatttgaat
ttgggaaatgaaattatgaaagattatgaatatctctggaatgctgtatcaaagttggtc
agaaagtttgatgttggaaagccatttcctctgagaacaacacaacttaattttcttaaa
aaggacccagtaccaatcaaagacacctccaaggaaaagatgcccagtttgggttttata
ccaatgtcatctgagatggttgataaatttgttggagacattttgaaagatttgcctttc
ctaaagagggatgatccgattgtaacttcactggttaaacataaggcgtttgatgagctt
atacattggcattctcacagacctcttagtgatgattatgatagggcaaagtccactttt
aatggaaaccctagagatccttattatcttaaatctctgcaaaagtttcaagtttttcag
cgattttatggaaattcattagaatcagtctctcccaaactcattgtaactcaagatgtc
aagccaaagaagaatttcagtaaacccaagaccaaaaaggcaaatgagacaaaggctgaa
ataattactagagagaataggaagagattacttgccaaggaagaacaaaaagaagagagt
aagtggagtgttctgtcacactccattgaggaggaaatgaaagagaatttaaactctgga
atacagaacctggaagattttttgaaatcatgtaaaagtaacttggtgaaatatcaagtt
gaaatggtagggttaactgcctgcttgaaagcatggaaagaacattgtagaagccaagtt
aaaggtgaaaccacaaaagatttaagtatagctgttcaaatgatgaaaaggatccactcc
ttgatggaaaaatacccagaatttttgcaagaggcagatcggcaactcatagccagatgc
cttaagtatttaggatttgacgagttggcaagttctttaaatccaactgaggttgcagaa
gatggcataaaggagaagaaaaagaataaatattcaattggcattgggcctgttaggttt
caactacaatatatgggccattttttgctacgagatgagagaaaagatccagatcccaga
gttcatgattttattcctgacacatggcagcgagagctccttgatgttgtggataataat
gaatcagctgtgattgttgctccaacgtcctcaggcaaaacctatgcttcctactactgc
atggagaaagtgctaaaggagagcaatgaaggggtggttgtgtatgtctcaccaacaaag
gcccttgttaatcaagtggcagcaactgttcagaatcgttacatgaaaaatctgcctaat
ggtgaagctctatgtggtgtttttacaagggaatatcgtcatgatgccctaaactgtcag
gtacttgttacagtgcctgcctgccttgaaattttgctgttagctcctcatcgccaaaga
tgggtgaaaaggatccgatatgttatatttgatgaggtccattgtcttggtggagagatt
ggagcagaaatttgggaacatctccttgtcatgattcgatgtccctttctggctctttcg
gctacaataagcaaccctgaacatctcactgagtggctacaatcgataaaatggtactgg
aaacaagcagacaatataatagaaaagaacactgcttctaaaagaaatgctggctatcgt
gccagttttcacaaagaccactttcaaatgaagcaatcatataaagttagacttgtgctc
tatggagagagatacaatgacttagagaagcatatatgttcggtaaaacataatgacgtt
tactttgatcattttcacccgtgtgccgcactaacagcagagcatattgaaaggtatgga
ttcccttctgatcttatgctttcgcctcgagaaaccatccagctttatgacaccatgttt
gaattctggaaaagttggcccagggcccaggagttgtgtccagagaatttcattcatttt
aagaataaaataatcatcaagaagatggatgctaggaaatatgaagagagcttaaaggca
gaattaacaaattggattaaaaatggcaatgtagaggaggccaaacaggtcctgaggaat
cttagtcccaaaccagtttctagttcagaaaacatgatacaaatgttcccacttctcatt
gaaaagcttaggaaaatggagaagttaccagcactaatttttttattcaagttaggagct
gtagagaagtgtgctaaaagtgtctgcacttttttggaggagaagcaagagagagaaagg
cctcccaacgctgataaagaagcctatgacatggctaacaaacttcgaaaaattaaaaaa
tctatcgaaaaacaaaagataatagatgaaaaaagccagaagaagcccaggaaaatggat
agaagcctaatacatgaagctgaacataacagtctactcaagattctagagaagaacctg
gaaatccctccggagttcacctatgctgacagaaagacagtggacagcgagcttttgcag
atggtgtttgatcgagtaaaattcttaaggaaaggtgcagaactgaaggctttggcagaa
aggggtgtcgggtatcatcacagatgtttgtttgccaaagaaaaacagttagttgaaatt
ctttttcggaaaggatttattagggtagtgacagctaccgggacacttgctttaggaatc
aatatgccttgtaaatctgtggtttttgctcaaaactcaatctatctggatgctttaaat
tacagacagatgtctggacgtgctggaagacgaggtcaggacctgctgggagatgtatat
ttctttgatattccattccccaaaatacaaaaactcataaaatccaatgttcctgagctg
agaggacagtttcccttcagcataaccctggtgctgcgactcatgatcttggcttcgagg
ggagatgacccagaagacgcccaggcaaaggtgctgtcagtactaaagcattcattgctg
tccttcaaacaacccaaaaccatggagatgttaaaactttacttcttattttccttgcag
ttcctggtgaaagagggctatctagatcaagaaggtaatccgatgggttttgctggactt
gtatcacatttgcattatcacgagccttctaatcttgtttttgtcagttttcttgtaagt
ggccttttccataatctctgtcagccaacccataaaggctcaaaatgtttttctcaagat
gttatggaaaagctcatgttggtgttggcaaatctgtttggaagaagatatattccatca
aagttccaagaaagtactgtcaagttttatcaatcaaaggtgttccttgaggatctccct
gaggattttaatgctgctttacatgaatataacatgcaaattacaaaggactttgcctcc
ttcctactaattgtttccaaattggctgacatgaaacaggaatatcaacttccattgtca
aaaataaatttcacagggaaagaatgtgaagactcccaacttgtgtctcacttgatgagc
tgcaaggaaggaagagttgctatttctccatttgtttgtctctctgggaactctgatggt
gatttgcttcaaccagcaactccaagccatgtcattctgcgcacaattggtatcagtcat
gctcaggctcctgtgctttggccgcacaggtttgatagccaaggaagaagaatgccactt
aatgcttatgcacttgatttctataagcatggttccttgacaggattagtccaggacaac
aggatgaatgaaggagacgcttatgagctgttgaaagatttttcactcacccttcaatct
atcagtgtttccttgcgtgaactatgtgaaaatgaagatgacaatgtggtcttagcattt
gaacaactgagcaaaaccttttctgaaaaatttaacaaagtctga
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integrated database retrieval system
