Myotis yumanensis (Yuma myotis): 139010951
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Entry
139010951 CDS
T10762
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03082
ATP-dependent chromatin remodeling
myum04714
Thermogenesis
myum05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139010951 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
139010951 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
139010951 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myum03021
]
139010951 (SMARCA4)
03036 Chromosome and associated proteins [BR:
myum03036
]
139010951 (SMARCA4)
Transcription machinery [BR:
myum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139010951 (SMARCA4)
Chromosome and associated proteins [BR:
myum03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
139010951 (SMARCA4)
Chromatin remodeling factors
BAF complex
139010951 (SMARCA4)
PBAF complex
139010951 (SMARCA4)
GBAF(ncBAF) complex
139010951 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
139010951
NCBI-ProteinID:
XP_070272157
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPSQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRTGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQSLGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQVPTLPPPSVSAAGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDEESKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS
RAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccaggcccttctccaggccct
ggcccctctcctggagccatgttgggccctagcccaggtccctcccctggctctgcccac
agcatgatggggcccagtccggggcctccctcagcaggacaccccatcccaagccagggg
cctggaggataccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaagggcatgtcggatgacccccgctacaaccagatgaaggggatggggatgcggaca
gggggccacgcagggatggggcctccaccgagccccatggaccagcactcacaaggttac
ccctcaccactgggtggctccgagcacgcctctagtccggttccagccagtggcccatcc
tcgggcccacagatgtcgtctggaccaggaggggccccgctggatggcgctgacccccag
tctttggggcagcagaaccggggcccaacaccatttaatcagaaccaactgcatcagctc
agagctcagatcatggcctacaagatgctggccagggggcaacccctgcctgaccacctg
cagatggcagtgcagggcaagcgaccgatgcccgggatgcagcagcaggtgccaacacta
cctccaccctctgtgtctgcagcaggacctggccctggccctggccctggccctggacca
ggcccaggcccagcacctccaaattacagcagaccccacggtatgggagggcccaatatg
ccacccccaggaccttcaggagtgccccccggtatgccgggccaaccccctggagggcct
cccaagccatggcctgaaggacctatggcgaatgctgctgcccccacaagcacacctcag
aagctgatcccccctcagcctacaggccgtccttcacctgcaccccctgccgtcccgccc
gctgcctctcctgtgatgccaccccagacgcagtcgccagggcagccggcccagcctgcc
cccatggtaccgctacaccagaagcagagccgcatcacccccatccagaaaccccggggc
ctggaccctgtggagattctgcaggagcgggagtataggcttcaggctcgcatcgctcat
cgaattcaggaacttgaaaacctacccgggtcactggccggggatttgcgaaccaaagca
actattgagctcaaggccctcaggctgctgaacttccagaggcagctgcggcaggaagtg
gtggtgtgcatgaggagggacacggccctcgagaccgccctcaatgccaaggcctacaag
cgtagcaagcggcagtccctgcgtgaggcccgcatcaccgagaagctggagaagcagcag
aagattgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaacagcattctt
cagcatgccaaggatttcaaagaatatcaccgatccgtcacagggaaaattcaaaaactc
acaaaggcagtggccacgtatcacgccaacacagagcgggaacagaagaaggaaaatgaa
agaatcgagaaggaaagaatgcggaggctcatggcagaagatgaggaagggtaccggaaa
ctcatcgatcagaagaaggacaagcgcttggcctacctcttgcaacagacagatgagtac
gtggctaacctcacggagctggtgcggcaacacaaggcagcccaggttgccaaggagaaa
aagaagaagaagaaaaagaagaaggcagaaaatgcagaaggacagacacctgcaatagga
cccgatggcgagcctctggacgagaccagccaaatgagtgacctgcctgtgaaagtgatc
catgtggagagtgggaagatcctcacaggcacggatgcccccaaagcagggcagctggag
gcctggcttgagatgaacccagggtatgaagtagctccaagatctgatagtgaagaaagt
ggctcagaagaagaggaggaggaggaggaggaggaacagccgcagccagcacagcctccc
actttgcctgtggaggagaagaagaagattccagatccagacagtgatgacgtctctgag
gtggacgctcggcacatcattgagaatgccaagcaagatgttgatgatgagtacggtgtg
tcccaggcccttgctcgtggcctgcagtcctattatgccgtggctcatgctgtcactgag
agagtggataagcagtcagcgcttatggtcaatggcgtcctcaaacagtaccagatcaag
ggcttggagtggctggtgtccctatacaacaacaacctgaatggcatcctggccgatgag
atgggcctggggaagaccatccagaccattgcactcatcacgtacctcatggagcacaag
cgcatcaatgggccctttctcatcattgtacctctctcaacgctgtcaaactgggcttac
gaatttgacaaatgggctccctccgtggtgaaggtgtcctacaagggctctccagcagcc
agacgggctttcgtcccccagctccggagtggcaagttcaatgtcttgctaacaacatac
gagtacatcattaaagacaagcacatccttgcgaagatccgctggaagtacatgatcgtg
gatgaaggccaccgcatgaagaaccaccactgcaagctgactcaggtcctcaacacgcac
tacgtggctccccgccgccttctgctgacaggcacgccgctgcagaacaagctccctgag
ctctgggcactcctcaatttcctgctgcccaccatcttcaagagctgcagcacctttgag
cagtggttcaatgcgccctttgccatgactggagaaaaggtggacttaaacgaggaggag
accatcctcatcattcgtcgcctccacaaagtgctacggcccttcctgctccggcggctc
aagaaggaggttgaagctcagttgcctgaaaaggtggagtacgtcatcaagtgcgacatg
tctgctctgcaacgtgtgttgtaccggcacatgcaggccaagggggtgttgctgaccgat
ggctctgagaaggacaagaagggcaaaggcggcaccaagaccctgatgaacaccatcatg
cagctgaggaagatctgcaaccacccgtacatgttccagcacatcgaggagtccttttcc
gagcacctgggatttaccggtggcatcgtccaagggctggacctgtaccgagcctcaggg
aaattcgagctcctcgatagaattttgcccaaacttcgtgccaccaaccataaagtgcta
ctcttctgtcagatgacctctctcatgacgatcatggaagattattttgcgtatcgtggc
tttaaatacctcaggctcgatggaaccacaaaagcggaggatcggggcatgctgctgaaa
accttcaacgagcccggctccgagtatttcatcttcctgctcagcacccgggccgggggg
ctcggcctgaacctccagtcggctgacactgtgatcatttttgacagtgactggaacccc
caccaggacctgcaagcgcaggaccgagcccaccgcattgggcagcaaaacgaggtgcgg
gtgctccgcctctgcacagtcaatagtgtggaggagaagattctggctgccgccaagtac
aagctcaacgtcgatcagaaggtgatccaggccggcatgtttgaccagaagtcctccagc
catgagaggcgtgccttcctgcaggccatcctggagcatgaggagcaggacgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagatgaagtgcccgacgatgaa
actgtgaatcagatgattgcccggcacgaagaggagtttgatctattcatgcgcatggat
ctggaccgcaggcgtgaggaagcccgcaaccccaagcggaagccacgcctgatggaggag
gatgagctcccctcatggatcatcaaggacgatgcggaggtggagcggctgacctgcgag
gaagaagaagagaagatgtttggccgtggttcccgccaccgcaaggaggtggactacagt
gactcactgacggagaagcagtggctcaaggccatcgaggagggcacgctggaggagatc
gaagaggaggttcggcagaagaaatcatcgcgaaaacgcaagcgggacagcgatgccggc
tcctccaccccgaccaccagcacccgtagccgcgacaaggacgaggagagcaagaagcaa
aaaaagcgcgggcggccacctgctgagaagctctcccccaacccgcccaacctcaccaaa
aagatgaagaagattgtggacgctgtcatcaagtataaggacagtagtagtggacgtcag
ctcagcgaggtgttcatccagctgccctcccgcaaggagctgcctgagtactacgagctc
atccgaaagcctgtggacttcaagaagattaaggagcgcatccgcaaccacaagtaccgc
agcctcaacgacttggagaaggacgtcatgctgctgtgccagaacgcgcagaccttcaac
ctggaaggctccctgatctacgaagactccattgttctgcagtccgttttcaccagcgtg
cggcagaaaatagagaaagaggatgacagtgaaggcgaggagagcgaggaggaggaggag
ggcgaggaggaaggctcggagtccgagtcccgctcagttaaagtgaagatcaagctgggc
cggaaggagaaggcacaggatcggctgaaggggggccggcggcggccaagccgtgggtcc
cgggccaagccggtggtgagtgacgatgacagtgaggaggagcaggaagaggaccgctca
ggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
