Myotis yumanensis (Yuma myotis): 139011285
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Entry
139011285 CDS
T10762
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139011285 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myum03019
]
139011285 (XAB2)
03041 Spliceosome [BR:
myum03041
]
139011285 (XAB2)
Messenger RNA biogenesis [BR:
myum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139011285 (XAB2)
Spliceosome [BR:
myum03041
]
Complex B
Other components
Prp19-related factors
139011285 (XAB2)
Complex C
139011285 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_NPHP3
TPR_1
Motif
Other DBs
NCBI-GeneID:
139011285
NCBI-ProteinID:
XP_070272859
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
VDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATQAVEPAQQYEMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAEHDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcatggcgcgactttcgcggcaggagcggccggaccttgtctttgatgaagaa
gacctcccctatgaggaggaaattatgcggaaccagttttctgtcaaatgctggctccgc
tacattgagttcaagcagggggccccgaagcccaggctcaatcagttgtacgagcgagcg
ctgaagctgctgccctgcagctacaaactctggtaccgctacctgaaagcacgcagggcc
caggtgaagcatcgctgtgtgactgatcctgcctatgaagacgtcaacaactgccacgag
agggccttcgttttcatgcacaagatgccacgtctatggctggattattgtcagttcttg
gtggaccagggccgtatcactcacacacgccgcactttcgaccgtgccctccgggcgctg
cctatcacacagcactctcgtatttggcctctgtacttgcgcttcctgcgctcacaccca
ctacctgagacagccgtgcggggctaccggcgcttcctcaagctgagcccagagagcgca
gaggaatacatcgagtacctcaagtcaagtgaccggctggacgaggctgcacagcgcctg
gccaccgtggtgaatgatgagcgcttcgtctccaaggctggcaagtccaactaccagctg
tggcatgagctctgtgacctcatctcccagaacccggacaaggtgcagtctctcaacgtg
gacgccatcatccgagggggccttacccgcttcacagaccagctgggcaagctctggtgt
tcactggccgactactacatccgcagtggccattttgagaaggctcgggacgtgtacgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgtttgacagctatgcc
cagtttgaggagagcatgattgcagcgaagatggagaccacctcggagctggggcgggaa
gaagaggatgatgtggacttggaactgcgcctggcccgctttgagcagctgatcagtcgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccgcaccatgtccatgagtgg
cacaagcgtgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacagag
gctgtgcagacagtggaccccttcaaggctacgggcaaaccccatacgctgtgggttgca
tttgccaagttttatgaggacaacgggcaactggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaagtggatgacctggcaagtgtgtggtgcgagtgtggt
gagctggagctccggcacgagaattacgaccaggccttgcggctgctgcggaaggcaaca
gcactgcccgcccgccgggctgagtattttgatggctcggagcctgtgcagaaccgtgtg
tacaaatcattaaaggtgtggtccatgcttgccgacttggaggagagccttggcaccttt
cagtctaccaaggccgtgtatgaccgtattctggacctgcgcatcgctaccccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgtggcatctcgctgttcaagtggcccaatgtgtctgacatctggagcacctat
ctgaccaaattcatcgcccgctatgggggccgcaagctggagcgggctcgggacctcttc
gagcaggcgctggatggttgcccccccaaatatgcaaagaccctgtacctgctgtacgca
cagctggaggaggagtggggcctggcccggcacgcaatggccgtgtacgagcgcgccacc
caggccgtggagcccgcccagcagtacgagatgttcaacatctacatcaagcgggcagcg
gagatctatggagtcacccacacccgtggcatctaccagaaggccattgaggtgctgtcg
gacgaacatgcccgggagatgtgcctgcggtttgcggacatggagtgcaagcttggagag
attgaccgcgcccgggccatctacagcttctgctcccagatctgtgaccctcggacaact
ggggccttctggcaaacatggaaggacttcgaggtacggcatggcaacgaggacaccatc
cgggagatgctgcgtatccgccgaagtgtgcaggccacttataacacacaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagtgctacaggcactgtgtccgaccttgcc
cccgggcagagtggcatggatgacatgaagctactagagcagcgggcagagcagctggca
gccgaggccgagcacgaccagcccccacgggcccagagcaagatcctgttcgtgaggagc
gatgcgtcccgggaggaactggctgagctagcgcaacaggccaacccggaggagatcgag
ctgggggaggacgaggacgaggacgagatggacctggagcccaatgaggtgcggctggag
cagcagagtgtgccggctgctgtgtttgggagcctgaaggaagactga
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