Myotis yumanensis (Yuma myotis): 139012741
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Entry
139012741 CDS
T10762
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139012741 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myum03041
]
139012741 (DHX16)
Enzymes [BR:
myum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139012741 (DHX16)
Spliceosome [BR:
myum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139012741 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_30
AAA_19
SecA_DEAD
Flavi_DEAD
Cas3-like_C_2
nSTAND3
SRP54
Motif
Other DBs
NCBI-GeneID:
139012741
NCBI-ProteinID:
XP_070275103
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MATPAALERWVQDELHAVLGLSERHVAQFLIGTARRCSSAEEFVQRLRDTDTLDLGGPAR
DFALRLWSKVPREAVVEKPARAAEREARALLEKNRSYKLLEDSEESSEESVGRAGSHLQK
KRKRRKHLRKKRQEEEEEEEEEDSARGKKTGGSRQQAEKPESEDEWERTERERLQDLEER
DAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKR
EREKLEDLEAELADEEFLFGDVELSQHERRELRYKRRVRDLAREYRAAGEQEKLEATNRY
HMPEETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAAALKFGARDAASQEPKYQLVLE
EEETIEFVRATQLQGDEEPAAPPSPTQAQQQECIQAVRRSLPVFPFREELLAAIASHQVL
IIEGETGSGKTTQIPQYLFEEGYTKKGLKIACTQPRRVAAMSVAARVAREMGVKLGNEVG
YSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKD
VARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVS
VLQIHVTQPPGDVLVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQAR
IFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKAS
ANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF
DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSE
EILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWC
YENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAVTAGYFYHTARLTRSG
YRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKA
KELEDPHAKKMPKKTGKTREELG
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcggcgctggagcgctgggtgcaggacgagctgcacgcggtgctgggg
ctgagcgagcggcacgtggcgcagttcctgatcggcacggcgcggcgctgcagctcggcc
gaggagttcgtgcagcgcctgcgcgacaccgacaccctggacctcggcgggcctgcgcgg
gacttcgccctgcgactctggagcaaggtgcctcgggaggcggtggtggagaagccagcc
cgggcagccgagcgagaggcccgagccctgctggagaagaaccgatcgtataagttgctg
gaagacagtgaggagagcagtgaggagagtgtgggtagggctgggagccatctccagaag
aagcgtaaaaggcggaaacacctcaggaagaaacgccaggaggaggaggaagaggaagaa
gaggaggattctgcgagagggaagaagacgggggggagccgacagcaggcagaaaagccg
gagtcggaggatgaatgggagcggacggagcgagagcgcctccaggacctggaggagcgc
gacgccttcgcggagcgggttcggcagcgggacaaggaccggacccgcaatgtcctggag
cggtcagacaagaaggcttatgaagaggcgcagaagcgcctcaagatggctgaggaagac
cggaaggccatggtccctgagctgcggaagaagtcccgccgcgagtacctggccaagcgg
gagcgagagaagctggaggacctggaggccgagctggcggatgaggagttcctttttggg
gacgtggagctgagccagcatgagcggcgagagctcaggtacaagcggcgagtgcgggac
ctggcgcgggagtaccgggcagccggcgagcaggagaagctggaggccaccaatcgctac
cacatgcccgaggagacccgaggacagccagctcgagctgtggatctggtggaggaggaa
tcgggcgcccccggggaggagcagcggcgctgggaggaggcccggctgggggccgccgcc
ctgaaatttggggcccgagatgctgcctcccaggagcccaagtaccagctggtactcgag
gaagaggagaccatcgagtttgtccgggccactcagctgcagggcgatgaggagccggca
gctccgccctcgcccacccaggcccagcagcaggagtgcatccaggcggtgcgccgcagc
ctccccgtgttccccttccgcgaggagctcctggctgccattgcgagtcaccaggtcctc
atcatcgagggcgagaccggctcggggaagaccacccagatcccgcagtatctctttgag
gagggttatacaaagaagggtctgaagatcgcctgcacccagcccaggagagtggccgcc
atgagtgtggccgcccgagtcgctcgggagatgggcgtgaagctggggaatgaggtgggc
tacagcatccgctttgaggactgcacgtcagagcggacggtcctccgctacatgaccgac
ggcatgctgctccgcgagttcctctcggagcccgacctggcgagctacagcgtggtgatg
gtggacgaggctcacgagcggaccttgcacacggacattctctttggattgatcaaagat
gtggctcgcttccgacctgagctcaaggtcctggtggcttcggccacactggacactgcc
cgtttttccaccttctttgatgacgcccccgtcttccggatccctggacgcaggtttcca
gttgacatcttctataccaaggctccggaggccgactacctggaagcctgtgtggtgtct
gtgctgcagatccacgtgacgcagccccccggggacgtcctggtgttcctgacgggacag
gaggagatcgaggctgcctgcgagatgctccaggaccgctgccgccgcctgggctccaag
atccgggagctgctggtgctgcccatctacgccaacctgccctccgacatgcaggcccgc
atcttccagcccacgcccccaggggcacgcaaggtggttgtggcaaccaacatcgccgag
acttcactcaccatcgagggcatcatttacgtgctggatccagggttctgtaagcagaag
agctacaaccctcgcacaggcatggagtcactcacggtcacaccctgcagcaaggcctca
gccaatcagcgagcgggccgggctggccgggtggcggccgggaagtgcttccgcctgtac
accgcctgggcctatcagcacgagctggaggaaaccacggtgcccgagatccagaggacc
agcctgggcaacgtggtgttgctgctcaagagcctagggatccatgacctcatgcacttt
gactttctggaccctcccccgtatgagaccctgctgctggcgttggagcagctgtatgct
ctgggagccctcaaccaccttggggagctcaccacgtctggtagaaagatggcagagctg
ccagtggaccccatgctatctaaaatgatcctggcttctgagaagtacagctgctcagag
gagatcctgacagtggccgccatgctgtccgtcaacaactccatcttctaccggcccaag
gacaaagtcgtccacgcggacaacgcccgtgtcaacttcttcctccctgggggggaccac
ctggttctgctaaacgtgtacacacagtgggctgagagtggttactcttcccagtggtgc
tatgagaactttgtccagttcagatcgatgcgccgagcccgggatgtgcgagagcagctg
gaggggctcttggagcgggtggaagttggcctcagttcctgccagggggactatatccgt
gtccgcaaggccgtcactgccggttacttttaccacacagcacggttgactcgcagcggc
taccgcacagtgaaacagcagcagacagtgttcattcaccccaactcctccctctttgag
gaacagcctcgctggctgctctaccatgaacttgtgttgaccaccaaggagttcatgcga
caggtattggagattgagagcagttggcttctggaggtggcacctcactattataaagcc
aaggagctagaagatccccatgccaagaaaatgcccaaaaaaacaggaaagacacgtgaa
gagctagggtaa
DBGET
integrated database retrieval system
