KEGG   Myotis yumanensis (Yuma myotis): 139014041
Entry
139014041         CDS       T10762                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
myum  Myotis yumanensis (Yuma myotis)
Pathway
myum03013  Nucleocytoplasmic transport
myum04150  mTOR signaling pathway
myum05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:myum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    139014041 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    139014041 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    139014041 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myum03019]
    139014041 (SEH1L)
   04131 Membrane trafficking [BR:myum04131]
    139014041 (SEH1L)
Messenger RNA biogenesis [BR:myum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     139014041 (SEH1L)
Membrane trafficking [BR:myum04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    139014041 (SEH1L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EIPR1 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 139014041
NCBI-ProteinID: XP_070276812
LinkDB
Position
Unknown
AA seq 360 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSYHILAI
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSTQQGNPNPSLGSSIPNLQNSLNGSSAGRKHS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgtttgtggcacgcagcatcgcggcggaccataaggacctcatccatgatgtatctttc
gatttccacgggcggcggatggcgacctgctctagcgaccagagcgtcaaggtctgggat
aaaagtgaaagtggagagtggcattgtactgctagctggaagacacatagtggatctgtg
tggcgtgtgacatgggctcatcctgaatttggacaggttttggcttcctgctcttttgac
cgaacagctgctgtttgggaggaaatagttggagaatcaaatgacaaactgcgaggacag
agtcattgggttaagaggacaacgctagtggacagcagaacatctgttactgatgtgaaa
tttgctcctaagcatatgggtcttatgttagcaacttgttcagcggatggtatagtaaga
atatatgaggcaccagatgtcatgaatctcagtcagtggtctctgcagcatgagatctca
tgtaaactaagctgcagttgtatttcttggaacccttcaagctctcgtgctcattccccc
atgatagctgtaggaagtgatgacagtagtccaaatgcaatggccaaagttcagattttc
gaatataatgaaaacaccaggaaatatgcaaaagctgaaaccctcatgacagttactgat
cctgtccatgatattgcatttgctccaaacctgggaaggtcttaccacattctggccata
gcaaccaaagatgtgagaatttttacattaaagcctgtgaggaaagaacttacttcctct
ggtggaccaacaaaatttgaaatccatatagtggctcagtttgataatcataattctcag
gtttggcgagtgagttggaatataacaggaacagtgctagcatcttcaggcgatgatggc
tgtgtaagattatggaaagctaattatatggacaattggaagtgtactggtattttgaaa
ggtaatgggagccctgtcaatgggagtactcagcagggaaacccaaatccttccctaggt
tcaagtatcccaaatcttcaaaattcattaaatggatcttctgctggcagaaagcacagc
tga

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