Myotis yumanensis (Yuma myotis): 139014121
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Entry
139014121 CDS
T10762
Symbol
PABPC1L
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03015
mRNA surveillance pathway
myum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139014121 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
139014121 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myum03019
]
139014121 (PABPC1L)
03041 Spliceosome [BR:
myum03041
]
139014121 (PABPC1L)
Messenger RNA biogenesis [BR:
myum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139014121 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
139014121 (PABPC1L)
Spliceosome [BR:
myum03041
]
Complex C
Other components
Complex C specific factors
139014121 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_7
RBD_DEAH11
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
139014121
NCBI-ProteinID:
XP_070276974
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MNASGPGFPLASLYVGDLHPDVTETMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAELALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEESIDNKALYDTFS
TFGNILSCKVACDDHGSRGFGFVHFETREAAQQAISTMNGMLLNNRKVFVSHFKSRQERE
AELGVRAMEFTNVYVKNLQMDIDEQGLEELFSQFGKTLSVKVMRDDSGHSRGFGFVNFEK
HEEAQKAVMDMNGKEVRGQLLYVGRAQKWAERQNELKRKFQQMKQMKQDRLNHYQGVNLY
VKNLDDSIDNERLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGCI
LGTKPLYVALAQRKDERKAILTNQFMQQRLSNVWALGGPLLGSFQQPVSYFLPTVPQPPA
QAACYGSGPPVQPAPRWTAQPPRPLIPQPTYSPAASVAWSPATSQHSPTHISSVKKASTQ
EPPQMSYTQTVANIGTQTSGLGEAGCSMPSGPLLTQRYSLETPNTHEVQEPAVCIPGQEP
LTVSMLAAAPLHKQKQMIGERLYPLIYNVHTQLAGKITGMLLEIDNSELLFMLESPESLN
AKVEEALAVLHQAHQTVEEEQMKVNVTETRWVGGVERNGDRRS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggcccgggcttcccgctggcctcgctctacgtgggtgacctgcacccc
gacgtgaccgagactatgctgtacgagaagttctcgcttgccgggcccatcctgtccatc
cgcgtgtgccgcgacgtggccacccgccgctcgctgggctacgcctacatcaacttccag
cagccggccgacgcggagctggcactggatacaatgaactttgaggttatcaaaggccaa
cccattcgcatcatgtggtcccagcgagacccaggacttcgaaagtcgggtgtgggcaac
atcttcatcaagaacctggaggagtccattgacaacaaggccttatatgataccttctcc
acctttggaaacatcctgtcttgcaaggtggcgtgtgatgaccacggctcccgaggcttt
ggctttgtccattttgagacccgtgaggctgcgcagcaggccatcagcaccatgaatggg
atgctgctgaataaccgcaaagtcttcgtcagccacttcaagtcccgacaggagcgggag
gctgagctgggggttcgggccatggagttcaccaacgtctatgtgaagaacctgcaaatg
gacatagacgagcagggcctggaggagctcttctcccagtttgggaagacgctgagtgtg
aaggtgatgagggatgacagcggccactcccgaggctttggctttgtcaactttgagaag
catgaggaagcccagaaggctgtgatggacatgaacgggaaggaggtgagaggacagctg
ctctatgtgggccgtgcccagaagtgggcggagcggcagaatgagcttaagcgaaagttc
cagcagatgaagcagatgaagcaggaccggctgaaccattatcagggcgtgaacctgtat
gtgaagaacctggatgactccattgataatgagaggctgaggaaagagttctctccctac
ggagtgatcaccagtgccaaggtgatgacagagggtggccacagcaaagggtttggcttt
gtgtgtttttcctctccagaagaggcaaccaaggccgtgacagagatgaacgggtgcatc
ctgggtaccaagccgctgtacgtggcgctggctcagcgcaaagatgagcggaaggctatc
ttgaccaaccagttcatgcagcagcgcctctccaacgtgtgggccctgggtggccccctc
ttgggctctttccagcagcccgtgagctacttcctgcccaccgtgccccagcctccagcc
caggctgcgtgctatggctctggcccacctgtccagcctgcccccaggtggacggcccag
ccacctagacccttgataccacaacccacctactctccagctgcctcagtggcctggtca
ccagccacgtctcagcactccccgacccacatcagcagtgtcaagaaagcctctacccag
gagccaccccagatgtcctatacccaaacagtggccaacattggtacccagacctctggc
cttggtgaggcaggatgctctatgccaagtgggcctctcctgacacagagatattccttg
gagacgcccaacacccatgaggtccaggagcctgctgtgtgcattcccggacaggaaccc
ctgaccgtgtccatgctggccgcagcaccactgcacaagcaaaagcagatgataggtgag
cgtctctacccccttatctacaatgtccacacccagctggcgggcaagatcacaggcatg
ctgctggagatcgacaactcagaactgctgttcatgctggagtctccagagtccctcaat
gcgaaggtggaagaggctttggcagtgcttcatcaggctcaccagaccgtggaggaagag
cagatgaaagtgaatgtaactgaaaccaggtgggtgggtggggttgagaggaatggtgac
agacgtagctga
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