Myotis yumanensis (Yuma myotis): 139014258
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Entry
139014258 CDS
T10762
Symbol
NPC1
Name
(RefSeq) LOW QUALITY PROTEIN: NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
myum04142
Lysosome
myum04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
139014258 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139014258 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
139014258 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
myum02000
]
139014258 (NPC1)
Transporters [BR:
myum02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
139014258 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
Folate_rec
ACR_tran
Motif
Other DBs
NCBI-GeneID:
139014258
NCBI-ProteinID:
XP_070277376
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MSARGLTLGLLLLLCPAQVFPQSCVWYGECGIASGDKRYNCAYSGLPRALPKDGYDLVQE
LCPGFFFGNVSLCCDVQQLRTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQFL
NVTETEEYVDPVTHENKTNVKELQYYVGESFANAMYNACRDVEAPSSNDKALGLLCGKEA
AACNATNWIEYMFNKDNGQAPFTITPVFSDLPAHGMEPMNNATKGCAEPVDEVTGPCSCQ
DCSAVCGPRPQPPPPPVPWRIWGLDAMYVVMWATYMAFLLMFFGAIFAVWCYRKRYLVSE
YTPIDSSIAFPMSVSDTGEASCCDPLGAAFEGCLRRLFTRWGSFCVRNPGCVIFSSLAFI
AACSSGLVFVRVTTSPVDLWSAPSSQARLEKEYFDTHFGPFFRTEQLIIQAPHTAVHTYE
PYPSGSDVPFGPPLDKGILHQVLDLQTAIEHITASYNNETVTLQDICLAPLSPYNKNCTI
LSVLNYFQNSHSVLDHEIGDDFYTYADYHTHLLYCVRAPASLNDTSLLHDPCLGTFGGPV
FPWLVLGGYDDQNYNNATALVMTFPVNNYYNDTEKLQRAQAWEREFITFVKNYKNPNLTI
SFTAERSIEDELNRESNSDISTVVTSYAVMFLYISIALGHIQSCSRLLVDSKVSLGIAGI
FIVLSSVACSLGIFSYVGVPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLEGETLD
QQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGMAVLIDFLLQITCFVS
LLGLDVKRQENNRLDILCCVRGGEDGAGLQASESCLFRFFRDSYSPLLLKAWMRPIVMAV
FVGVLSFSIAVLNKVEIGLDQSLSMPEDSYVMDYFRSLSQFLHAGPPVYFVVEEGLDYTS
LQGQNLVCGGMGCNNDSLVQQLFDAAELDAYTRIGFAPSSWIDDYFDWVKPQSSCCRVHN
SSGQFCNASVADPGCIRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYGS
AVNILGNDTGVGATYFMTYHTVLQTSADFIDAMRKARLIAGNITQTMSQGGSNYRVFPYS
VFYVFYEQYLTIIEDTVFNLCVSLGAIFLVTVVLLGCELWSAVIMCVTIAMILVNMFGVM
WLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSAKGSRVARAEEALSHMGSSVFSGI
TLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGAAHGLVFLPVLLSYIGPSVNKAKSLA
TQQRHRGTEREQLNF
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcgcggcctgaccctgggcctcctgctgctgctgtgcccggcgcaggtgttt
ccgcagtcctgcgtctggtatggagagtgtgggattgcttctggagacaagaggtacaac
tgcgcgtattccgggctcccgcgggcactgccgaaggacgggtatgacttagtgcaggaa
ctctgtccggggttcttcttcggcaacgtcagcctctgctgtgatgtgcagcagctccgg
accctgaaagacaacctgcagctgcctctccagtttctgtccagatgtccatcctgtttt
tataacttgatgaacttgttttgtgagctgacgtgtagccctcgacaaagccagtttctg
aacgttacagaaaccgaagagtatgtggaccctgttacccacgagaataaaacaaacgtg
aaggagttgcagtactatgttggagagagttttgccaatgccatgtacaacgcctgcagg
gacgtggaggccccctcgagcaacgacaaggccctggggctcctgtgtgggaaggaggcc
gcagcctgcaacgccaccaactggatcgagtacatgttcaacaaggacaacggccaggcc
cccttcaccatcactcccgtcttctcagacctcccggcccacgggatggagccgatgaac
aacgccaccaagggctgtgccgagcctgtggacgaggtcaccgggccctgcagctgccag
gactgctcggccgtgtgcggcccccgaccccagccgccgccccctcccgtcccctggaga
atctggggcctggacgccatgtacgtcgtcatgtgggccacctacatggcgtttttgctc
atgttttttggagccatttttgccgtgtggtgctatagaaaacggtacttggtctccgag
tacacccccattgatagcagcatagctttcccgatgagtgtcagcgacacaggggaggcc
tcctgctgcgacccgcttggcgccgcattcgagggctgcttgaggcggctcttcacccgg
tggggctccttctgtgtccgaaaccccggctgtgtcattttctcctccctggccttcatc
gccgcctgctcctcgggcctggtgttcgtccgcgtcaccaccagccccgtggacctctgg
tcggcccccagcagccaggcgcgcctggagaaggagtacttcgacacccacttcgggcct
ttcttccgcacggagcagctcatcatccaggcgccccacaccgccgtgcacacttacgag
ccgtacccctcggggtccgacgtgcccttcggacctccgctcgacaaagggatcctgcac
caggttcttgacttacaaacagccattgaacacatcactgcatcttacaacaacgagacc
gtgaccctccaggacatctgcttggccccgctctccccgtataacaagaactgcaccatc
ctgagtgtgttaaattacttccagaacagccactccgtgctggaccacgagataggggac
gacttctatacctatgcggattaccacacgcacctgctgtactgtgtccgggctcctgcc
tcgctgaacgacaccagcctgctgcacgacccctgcctggggacgttcggagggcctgtg
ttcccgtggctggtgctgggaggttatgacgatcaaaactacaataacgccaccgccctg
gtgatgacctttcctgtcaataattactacaacgacacggagaagctccagcgggcccag
gcctgggaaagagagtttattacctttgtgaaaaactacaagaacccaaatctcaccatt
tccttcactgctgagcgaagtattgaagatgaactgaaccgtgagagtaacagtgacatc
tccaccgtggtgaccagctatgccgtcatgtttctgtacatttccatcgccttggggcac
atccagagctgcagcaggcttctggtggattccaaggtctccctcggcatcgcaggcatc
ttcatcgtgctgagctcggtggcctgctcgctgggcatcttcagctacgttggggtcccc
ctcaccctcattgtgatcgaggtcatccccttcctggtgctggcggtcggggtggacaac
atcttcattctggtccagacctaccagagagacgaacgccttgaaggggagaccctggac
cagcagctgggcagggtcctgggagaagtggcccccagcatgttcctgtcgtccttttca
gagacggtggcctttttcttaggagccctgtcggtgatgcccgccgtgcacaccttctcg
ctgtttgccgggatggccgtcctcatcgacttcctgctccagatcacctgcttcgtgagc
ctcctgggcttggacgttaagcgtcaggagaacaaccggctggacatcctgtgctgtgtc
cgtggcggcgaggatggcgccggcctccaggcctccgagagctgcttgttccgcttcttc
cgagactcctactccccactgctgctcaaggcctggatgcggccaatcgtgatggccgtg
ttcgtgggcgttctctccttcagcatcgccgtcctgaacaaggtggaaattggattggac
cagtctctctcaatgccagaagactcctacgtgatggactatttcaggtccctcagccag
ttcctgcacgcgggcccacccgtctacttcgtggtggaggaggggctggactacacgtcc
ctgcaggggcagaacctggtgtgcgggggcatgggctgcaacaacgactcgctggtgcag
cagctgttcgacgcggccgagctggatgcctacacccggatcggcttcgccccctcgtcc
tggatcgacgactacttcgactgggtcaagccgcagtcctcgtgctgccgggtccacaac
agctccgggcagttctgcaacgcctcggtggccgaccctggctgcatccgctgcaggcct
ctgactcccgagggcaaacagcggccccaggggggagacttcatgcggttcctgcccatg
ttcctctccgacaacccgaaccccaagtgtggcaaagggggacatgctgcctacgggtcg
gccgttaacatcctgggcaatgacacaggtgtgggcgccacctacttcatgacctaccac
accgtgctccagacctctgctgacttcatcgacgccatgagaaaggcccggctcattgct
ggtaacatcacccagaccatgagccagggaggaagcaactaccgcgtgtttccatacagt
gtgttctacgttttctacgagcagtacctgaccattatagaggacaccgtcttcaacctc
tgcgtgtccctgggggccatcttcctggtgaccgtggtgctgctgggctgtgagctgtgg
tctgcagtgatcatgtgcgtcaccatcgccatgatcctggtcaacatgtttggtgtcatg
tggctgtggggcatcagcctgaacgcggtctccctggtcaacctggtcatgagctgcggc
atctcggtggagttctgctcccacatcaccagggccttcacagtgagtgcgaagggcagc
cgcgtggcgcgtgcagaggaggcgctctcccacatgggcagctccgtattcagtggaatc
acacttacgaaatttggagggattgtggtgttggcctttgccaagtctcagatcttccag
atattttacttcaggatgtacctcgctatggtcttgctgggagccgcgcacgggctggtc
ttccttcctgtcctcctcagctacataggaccatcggtaaataaagccaaaagcctggcc
acgcaacagcgacacagaggcacagagagagagcagctcaatttctag
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