Myotis yumanensis (Yuma myotis): 139014886
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Entry
139014886 CDS
T10762
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139014886 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
myum03041
]
139014886 (SF3B1)
03036 Chromosome and associated proteins [BR:
myum03036
]
139014886 (SF3B1)
Spliceosome [BR:
myum03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
139014886 (SF3B1)
Complex B
139014886 (SF3B1)
Complex C
U2 SnRNP specific factors
139014886 (SF3B1)
Chromosome and associated proteins [BR:
myum03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139014886 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
139014886
NCBI-ProteinID:
XP_070277858
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMHARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatatcgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatatatggtggaagtgacagcagatttgctgggtatgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aaaccaggatatcatgcccctgtggcattgcttaatgatataccacagtcaacggaacag
tatgatccatttgctgagcaccgacctccaaagattgctgaccgggaagatgaatacaaa
aagcacaggcggaccatgataatttccccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgcatgctagaacttatatggatgtaatgcgagagcagcat
ttgactaaagaagagagagaaattaggcaacaactagcagaaaaagctaaagctggagaa
ctgaaagtcgtcaatggagcagcagcgtcccaacctccctcaaaacgaaaacgccgttgg
gatcaaacagctgatcagactcctggtgccactcccaagaagctgtcaagttgggatcaa
gcagagacccctggacataccccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacaccaagtcac
acaccagcgggagctgctactcctggacgcggtgacacaccaggccatgcaacaccaggc
cacggaggcgcaacttccagtgctcgtaaaaaccgctgggatgagacccccaagacagaa
agagatactcctgggcatggaagtggatgggctgagacgcctcgaacagatcgaggtgga
gattcaattggtgaaacacccactcctggagccagtaaaaggaaatcacgttgggatgaa
acaccagctagtcagatgggcggaagcactcctgttctgacccctgggaaaacaccaatt
ggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcgttgggagagagaaattgatgagagaaatcgcccactttct
gatgaagaattagatgctatgtttccagaaggatataaggtacttcctcctccagctggt
tatgttcctattcgaactccagctcgaaagctcacggccactccaacacctttgggtggt
atgactggtttccacatgcaaactgaagacagaactatgaaaagtgtcaacgaccaacca
tctggaaatcttccctttttaaaacctgatgatattcagtactttgataaacttttggtt
gatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaaattg
cttttaaaaattaagaatggtacacctccaatgagaaaggctgcattgcgtcagattact
gataaagctcgtgagtttggagctggtcctttgtttaatcagatccttcctctactgatg
tctcctacacttgaggatcaagaacgtcatttgcttgtcaaagttattgatagaatatta
tacaaacttgatgacttagttcgaccatatgtgcataagatccttgtggtcattgaacca
ttgctgattgatgaagattactatgctagagtggaaggccgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgagacctgatatagataatatg
gatgaatatgttcgtaacacaacagctagagcttttgctgttgtagcttctgccctgggc
attccttcactattgcccttcttaaaagctgtgtgcaaaagcaagaaatcctggcaagcg
agacacactggtattaagattgtacagcagatagctattctgatgggctgtgccatcttg
ccacatctgagaagtttagttgaaatcattgaacacggtcttgtggatgagcagcagaaa
gttcggaccattagtgcgttggccattgctgccttggctgaagcagcaactccttatggt
atcgaatcttttgattctgtgttgaagcctctgtggaagggtatccgccaacacagagga
aagggtctggctgccttcttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattcgagaattccaatctcct
gatgaagaaatgaagaaaattgtgctgaaggtggtaaagcagtgctgtggaacagatggt
gtagaagcaaactacattaaaacagagattcttcctcccttttttaaacatttctggcaa
cacagaatggctttagatagaagaaattatcgacagttagttgatactactgtggagttg
gctaacaaagtaggagcagcagaaattatatccaggatcgtggatgatctgaaagatgaa
gctgaacagtacagaaaaatggtgatggaaacaattgagaagattatgggcaacttggga
gcagcagatattgatcacaaacttgaagaacaactgattgatggcattctttatgctttt
caagaacagactacagaggactcagtaatgttgaacggatttggcacagtggtcaatgca
cttggcaaacgggtgaaaccttacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatccgcaaaagttaggcaacaggcagctgacttgatctctcgaactgctgtt
gttatgaagacttgccaagaggaaaaattgatggggcacttgggtgttgttttgtatgag
tatttgggtgaagagtaccctgaagtattgggcagcattcttggagcactgaaggccatt
gtgaatgtaataggtatgcataagatgactccaccaattaaagatctgctgcctagactc
actcccatcttaaaaaacaggcatgaaaaagtacaagagaattgtattgatcttgttggg
cgtattgctgacaggggagctgaatatgtgtcagcaagggagtggatgaggatttgcttt
gagcttttggagctcttaaaagctcacaaaaaagctattcgtagagccacagtgaacaca
tttggttatattgcaaaggccatcggccctcatgatgtgttggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtgtgtaccactgtagcaatagctattgtcgct
gaaacatgttcacccttcacagtgcttcctgccttaatgaatgagtacagagttcctgag
ctcaatgttcaaaacggagtgttaaagtccctttccttcttgttcgaatatatcggtgaa
atgggcaaggactacatttatgctgtcacaccgttactggaagatgctttaatggatagg
gaccttgtacacagacagacggctagtgcggtggtgcaacacatgtcactgggggtttat
ggatttggttgtgaagattcgctgaatcacttgttgaactatgtatggcccaatgtgttt
gagacatctccccatgtaattcaggcagtgatgggagccctggagggcttgagagttgct
attggaccatgtagaatgttgcagtattgtttacagggtttgtttcacccagcccggaag
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaactt
gactatatcttataa
DBGET
integrated database retrieval system
