Myotis yumanensis (Yuma myotis): 139015996 Help Entry 139015996         CDS       T10762                                  Symbol SPG11 Name (RefSeq) spatacsin   KO K19026   spatacsin Organism myum  Myotis yumanensis (Yuma myotis) Pathway myum05014   Amyotrophic lateral sclerosis myum05022   Pathways of neurodegeneration - multiple diseases Brite DNA repair and recombination proteins [BR:myum03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      139015996 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  139015996 NCBI-ProteinID:  XP_070279634 LinkDB All DBs Position Unknown AA seq 2429 aa AA seqDB search MERVLPMLLVPVPAEATGRLGSRAQLHREQEVLGSLTAAGSLQVLSLAAGGRGGGGCSLD GPFRHFVWEDSHNSSTPTDKPRLLALSENNELLIYEFNLKDGRCDGTILYNCSEETLQKL IKDQNVSISLLTLRILSFHNNTSLLLINKCIILHIMFPGKDAEIRVLNYFTLRLPAQAVD SIIDMQLCRGILFVLSSLGWIYIFDIVGGTHVAHVDLALHQEDMCDDQQQEPAKISSFTS LKVSQDLDVVVIVGSSNSAIALNLNLYFRQHPGHLFCEKTLEDIPIEGAKGIDEDDPVNS DYNMKLTKFSFQVDRSWKAQLLSLNETIKSSTMEVSHCAPWFQDILHLEYPDSNNHCTNV PGWDFIPQDIMHSQYSFPQKSHAKTSDPGRAWKIMHISEQEEPIELRCVSVTGFTALFAW TVGKMGCTIVLWDLEIEGIQCFSLGKRCIPIDNSGDQQLCLVLTENGLSLILFGLTQEEF LNRLMIHGSASTVDTLCHLNDWGRCSIPIHALEAGIENRQLDTVDFFLKSKENLLTPSPK SSVPDQFDHFPSQLYLRNVEELTPALDLLCSAIRESNSETQSKNFSEQLLNLTLSFLNKQ IKELFIHSEELDEHLQKGVNILTSYINELRTFMIKFPWKLTDTVDEYDVNENVSKVKEST IWEKLSIEEVIANAILNNKIPEAQTFFRINSHPAQRLEELTKIGLDLVFDNLKKNNVKEA SELLKNMGFDVKDQLLKICFYTTDKNIRDFLVEILKEKNSFSEKEKRTIDFVHQVEKFYS EHLQENMQIQSFPRYWIMEQDFFKHRSVLDSFLKYDHKDKLNKQNHRIALNWAQWWNQLT QESILLPRINPEEYKSYSPEALWRYLTARHDWLSITSWIGEFQTQNSYSSLQQNKWPPLT IDIIDQSTCCNNNMRNKILDELARNGIFLRSELEDFELFLLRLNRIGGVMQDTLPVHNYK SKEGWDFHSHFILYCLEHSLQYLLYVYLDCYKLSPPNCSFLGKKELHETHPWFEFLVQCR EVSSNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHTLLALATTMYAPGGVSQVVQN EENENCLKKVDPQLLKMALTPYPKLKTALFPQYTAPSVLPPDITLYHLIQSLLPFDPSRL FGWQSANTLAIGDVSSHLPHFSSPDLVNKYAIVERLNFAYYLYHGRPSFAFGTFLVQELT KSKTPKQLIQQVGNEAYVLGLSSFHIPSIGAACVCFLELLGLDSLRLRVDMKVANIILSY RCANEDAQYSFIRESLAEKLSKVAGGEKTTTEELLVLLEEAIWNSIQQQEIKRLYSESSI QWALVVQFCRLHNIKLSTSYLRECAKANDWLQFIIHSQLHNYHPDEVKSLLQYFNPVLQD HLRLAFENLPSVSNSRMDSDQVCNKSPQELQKSKEERTDFFEILLRCSEEPNSWCWLLAE AVKQQAPILSVLASCLQDASAISCLCVWIIASVEDSIAAEAMGHIQDSLEGHTWDLEDFS VIWRTLLTRQKSKTLIRGFQLFFKDSPLLLMLEMYELCMFFKNYKEAKAKLLEFQKSLET LETAAIKVHAAIPVPWLKEQVCFLLKLMLQQCRTQYELGKLLQLFVGIEHLFSEGPDVKK LCILSHILKDTSIAINNVIITSYSLQNFQQECKSILEKLETNGQFALAKRVAELAELPVD NLVIEEVTQEMQNLKHIDQWSLKQTRIDFWKKCHENFKKNSISSKAASSFFTAQALVARE YPTEEGQSSTEECHLLLTLAGHWLAQEDLVPVEELEELEKQIWLCRITQHTLRGNQEERE PTFSQQISASGELSFDSLASEFSFSKLAALNTSKYLALNGLPSKETCENRLDWKEQESLI FLIGRLLDDGCVHEASRVCRYFHFYNQDVALVLHCRALASGEASVDDLQPEIHALLQSAE LLEEEKEPRIPLRKVSSTSSLESQSFVMLPPSDEMVTNLETLTHKCLHGKNYCRRVLCLY ELSKELGCSYTDVAAQDGEAILRAILASPQSDRCKRAQAFISTQGLEPDRVADLVAEEVT RELLSPSEGAGQKQMVTPAEESQAFLQLTTLCQDRTLVGMKLLEKISSVPHGELSCTTEL LILAHHCFTLTCHMEGIIRVLQAARLLTDNHLAPNEEYGLVVRLLTGIGRYNEMTYIFEL LHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAA ACIQLKLIESQPWEDSIKNGHQLKQLLLKALTLMLDAAESYAKDSCVRQALHCHRLTKLL TLQIHFLNTGQNTMLINLGRHRLTDCIMSLPRFYQASIVAEAYDFVPDWAEILYQHVILK GDFHYLEEFKQQRLLRTSIFEEISKKYKQHQPTDMTVKNLKKLLTYCEDIYLYYKLAYEH KLYDVVNMLLKDPQTGCCLKDMLAENTFK NT seq 7290 nt NT seq  +upstreamnt  +downstreamnt atggagcgggttctaccgatgttgttggtgccggtccccgctgaggccacggggcgtctg ggaagccgggcgcagctgcaccgagagcaggaggttctggggagcctgaccgccgcaggc agccttcaagtgctttccttggccgcgggcggccggggcgggggtggctgctccctggac ggccccttccggcactttgtgtgggaggattctcacaacagcagcacaccaacagacaag cccagactgctcgctcttagtgaaaataatgaattgctcatctatgaatttaatttgaaa gacggaagatgtgatggaaccattttgtataactgtagtgaggagactttgcaaaagctc attaaagatcaaaatgtcagtatttccttattaactttgagaattctgtcatttcacaat aacacatcattattgctcatcaacaaatgtatcatcctgcacatcatgtttcctggaaaa gatgctgagattagagtactcaactatttcacattacgcttgcctgcacaggctgtggac agtattattgacatgcagctctgcagaggaattctttttgttttgagtagtttaggctgg atctacattttcgacattgtgggtggtacacatgtagctcatgtggatttagcacttcac caagaagatatgtgtgatgaccagcaacaggagccagccaagatttcttcctttacttca ctgaaagtgtctcaagacctagatgttgttgtgattgtcggctcctccaactctgcaatt gctcttaacttaaacttgtatttcaggcaacacccaggacacctattttgtgaaaaaact ctagaagatattcctattgaaggtgctaaggggatagacgaagacgatcctgtgaattct gactacaacatgaaactgaccaagttttccttccaagttgataggtcttggaaagcccag ctattatcattgaatgaaacaataaagagctccacaatggaggtttcccactgtgctcca tggttccaggatattttgcatttggagtaccctgactctaataaccattgtaccaatgtg ccaggttgggacttcattccacaggacataatgcacagtcagtatagttttccacagaaa agtcatgccaagaccagtgatccaggaagagcatggaaaataatgcacatcagtgaacaa gaggaacccatcgagcttagatgtgtgtctgtgacaggattcactgccctgtttgcttgg acagtaggaaagatgggctgtaccatcgtcctttgggatttggagatcgagggcatacag tgcttttcccttggcaaaaggtgtattcctatagataatagtggagaccagcaactgtgc cttgttttgacagaaaatggactctctctgattttgtttggtttgacccaagaggagttt ttaaatagactaatgatccatggaagtgccagcactgtggacactctctgccatctcaat gattggggcaggtgctcaatccccatacatgcactagaggcaggaatagaaaatcgtcag ctggacacagtagatttctttttgaagagcaaggaaaatcttttgactccatccccaaaa tcttctgtacctgatcagtttgatcactttccatcacaattatatttaagaaatgtggaa gagctgacaccagcattggatttactttgctcagcaattagagaaagtaattctgaaacc caaagcaaaaacttttcagaacaattacttaatcttacactatccttccttaacaagcaa ataaaggagctttttattcacagtgaagagttagatgaacatctacagaaaggagtgaac attttgaccagctacattaatgaacttagaaccttcatgataaagtttccttggaagcta acagatactgtagatgaatatgatgtaaatgaaaatgtctccaaagtaaaggagagcact atatgggagaaactcagcattgaggaagttattgccaatgccattttaaacaacaaaata ccagaggcacaaactttcttcaggattaatagtcaccctgctcaaagactcgaagagctg actaaaattggcctcgatttggtctttgacaatttgaaaaagaacaatgtaaaggaagcc tctgaacttttaaagaatatgggctttgatgtaaaagaccagttgctcaagatatgcttc tatacaactgataaaaatatacgggactttttggttgaaattttaaaagaaaaaaattct ttttctgaaaaagagaaaagaactatagacttcgtccatcaagttgagaagttttattca gaacatttgcaagaaaatatgcagatccagtcctttcccaggtattggataatggagcaa gactttttcaagcacaggtctgttttggactcattcctgaaatatgatcataaagataag cttaataaacagaaccacagaattgcattaaattgggctcagtggtggaaccaactaaca caagaatctatcctccttcccaggataaatccagaagaatataaatcatattcccctgaa gccctctggagatacctcacagctcgccatgattggctaagcattacctcgtggattgga gaatttcaaacccagaatagttattcttcacttcagcagaacaaatggcctcctctgact attgatattattgatcagagtacttgctgcaacaacaacatgaggaataaaattttagat gagctggccaggaatgggatttttcttagatctgaactagaagactttgaactcttcctc ctaagactgaaccgtattgggggtgtgatgcaagataccctccctgttcacaactacaag tccaaagaaggttgggatttccattctcacttcattctttattgtttggaacacagtctg cagtatcttctttatgtctatctcgactgttacaagcttagtcctccaaattgttccttt ttgggaaaaaaagaattacatgaaactcacccttggtttgaatttttagttcagtgtcga gaagtttctagtaacttaacagatcctaaactgatcttccaggctagccttgcaaatgct caaatactgattcccagcaaccaggccagtgtaagcagtatgctgttggaaggacatacc ctcctggcccttgctaccacaatgtatgctcctggtggtgtcagccaggttgttcagaat gaagaaaatgagaactgtttgaaaaaagtagatcctcagctactgaagatggcattaact ccttatcccaagctaaaaactgctctcttcccacagtacactgcccctagtgtcctacca ccggatattacactctaccaccttattcagtcattattgccttttgatcctagcagattg tttggctggcagtctgccaacacactggctataggagatgtatcgagtcatctcccacat ttctctagccctgatctggttaataaatatgctatagtggaacgtctgaattttgcttat tatttatatcacggacggccatcatttgcatttggtacttttctggtccaggaattaact aagagcaagacccccaagcagctgatccagcaagtaggcaatgaagcctatgttttaggc ctctcttccttccacataccttcaataggagctgcctgtgtttgtttcttagaattgctt gggctcgacagcctcaggctcagagttgatatgaaagtggccaatataattctgagctac aggtgtgcaaatgaggacgctcagtacagctttatcagagagtctctagctgaaaagctg tctaaagtggctgggggtgaaaaaacaaccacagaagaattgcttgttctcttagaggaa gccatatggaacagtattcaacaacaggaaataaaaaggttatacagcgaatctagcatc cagtgggcattggtggtacagttctgcaggctccacaatataaaactgagcacgtcttac cttagagaatgtgccaaagcaaatgattggttacagttcattattcacagccagctccat aattaccacccagatgaggtgaaatctcttctccagtatttcaaccctgtccttcaagac cacttaaggctagcttttgagaacttgccctcagtgtccaactccagaatggatagtgat caagtctgcaacaagtccccccaggaactccagaaaagcaaagaagagagaactgatttc ttcgaaattctgctccggtgctcagaggagccaaactcctggtgctggctcctggctgaa gcagtgaaacaacaggcccctattcttagtgtcctagcctcatgtctgcaggatgccagt gctatttcttgtctctgtgtttggatcatcgcttctgtggaggacagtattgcagctgaa gcaatgggacacattcaggactcattggagggccatacatgggaccttgaggacttctca gtcatctggagaacattattaacaaggcagaagagcaaaactctcatcagaggtttccag cttttctttaaggattccccattactactgatgttggagatgtatgaactctgtatgttc ttcaagaattataaggaagccaaagctaaactactggagttccagaagagccttgaaact cttgaaacagcagccataaaggtccacgctgccatccctgtcccatggctgaaggagcaa gtgtgttttcttttgaagcttatgctgcagcagtgcaggacccagtacgagctgggaaag cttttacagctgtttgttgggatagagcatctcttctctgagggtccagatgtaaagaag ctgtgtatccttagccacattttgaaggatacatccatagccattaataatgtgattatt accagctatagccttcagaattttcagcaggaatgtaaatctattttggaaaaactggag acaaatggacagtttgctttggctaagagggtagcagaattagctgagttacctgtggac aacttggttattgaagaggtaacacaggaaatgcagaacttaaaacacattgaccagtgg tccctgaaacaaacaagaattgacttctggaaaaaatgccatgagaattttaagaaaaat tccatttcaagcaaagcagcttcttcctttttcacagcccaggcccttgtggcgcgtgag taccctactgaggagggacagagcagcactgaggagtgccatctgctgctcaccctggca gggcattggcttgctcaggaggacctggtccctgtggaggagctggaggagctggagaag cagatctggctctgccgtatcacccagcacaccctcagaggaaaccaggaggaaagagag cccacattttctcagcagatctcagctagtggtgaactttcctttgacagcttagccagt gagttttcattctccaagttggctgccctgaacacatcaaaatatttagcacttaatggc cttccatccaaagagacttgtgagaacagactagattggaaggagcaggagtcactaatc tttttgattgggcgcctattggatgatggctgtgtgcatgaagccagtcgagtatgccgg tacttccacttctataaccaagatgttgccttggtactgcactgcagagcactggcttca ggggaagctagtgtggatgacctacagccagagatccatgctctcctacaaagtgctgag ctgctggaggaagaaaaagaacctcgcattcctctaaggaaagtctcaagcacttcaagt ttggagagtcagtcatttgtgatgctgccccccagtgatgaaatggtgactaatctggaa actctgacacacaaatgcctccatgggaagaactactgccgacgggtcctctgtctgtat gaactttccaaggagttgggctgttcctacacagatgttgctgctcaggatggtgaggcc atactccgagcaatcttggcctctccgcagtctgaccgatgcaagcgagcccaagccttc atcagcactcagggcctggagccagacagggtggctgaccttgtggccgaagaggtgacc cgggagctactgtccccatcagagggagcaggacagaagcagatggtcaccccagcagaa gaaagtcaggcatttcttcagctaaccactttgtgtcaagaccgcacgttggtaggcatg aagttgttggaaaagatttcctccgttccccatggggaattgtcctgcactacagagctg ctgattctggcccatcactgcttcacgctgacatgccacatggagggcatcatccgagtt ctgcaggctgctcggctgctcacagacaaccacttggcccccaacgaggagtatgggctg gtggtgcgtctcctcactggcattggaaggtacaatgagatgacatacatttttgaattg ctgcataaaaagcactacttcgaagtgctgatgaggaagaagttggatccgagtggtacc ctgaagacagccctacttgactacatcaaacgctgccgccctggggacagtgagaagcac aacatgattgccctgtgcttcagcatgtgcagggaaatcggggagaaccatgaggcagct gcctgcatccagctgaaactgattgagtctcagccctgggaggatagcatcaagaatggg caccaactgaagcagctgctactgaaggccctgactctcatgctggatgccgccgagagt tatgcaaaggattcctgcgtgcgacaggccctgcactgtcacaggctcaccaagttgcta acactgcagattcactttctgaacactggccaaaacacaatgcttatcaacctaggtcgc cacaggctgacggactgcatcatgtccctacctcggttctaccaggcttctattgtggct gaggcctatgactttgttcctgattgggctgaaattctataccaacatgtgattcttaaa ggagactttcattacttggaagaatttaagcagcaaaggttattaagaaccagtatattt gaagagatttcaaaaaaatataaacaacaccagcctactgatatgactgtgaaaaacctg aagaagttactcacatattgtgaagatatctacttgtattacaagctggcatacgaacat aaactttatgatgttgtgaatatgcttctgaaggaccctcagacaggctgctgtctaaag gacatgctagcagaaaacacatttaaatga

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