Myotis yumanensis (Yuma myotis): 139016500
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Entry
139016500 CDS
T10762
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum04140
Autophagy - animal
myum04148
Efferocytosis
myum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139016500 (VPS39)
04148 Efferocytosis
139016500 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139016500 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myum04131
]
139016500 (VPS39)
Membrane trafficking [BR:
myum04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
139016500 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Diphthamide_syn
EcoR124_C
KCTD11_21_C
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
139016500
NCBI-ProteinID:
XP_070280729
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPAAVASPESGSCN
RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF
TCDLQHIETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG
FKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADRKVAVGQDDLTVVLNEEGICTQKCA
LNWTDIPVAMEHQPPYIIAVLPRYVEIRTLEPRLLVQSIELQRPRFITSGGSNIIYVASN
HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQK
RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYL
TQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL
RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV
QYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLA
IPYLEHVIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLAFPAGQTPVPAGEEEGELGEY
RRKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAE
EYCHKHYDQNKDGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHS
KLDTTKALNLLPANTQINEIRIFLEKVLEGNAQKKRFNQVLKNLLHAEFLRVQEERILHQ
QVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVHPADT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccggtgccgatcctagaaaagctgcctctgcagatcgactgt
ctggctgcctgggaggaatggcttcttgttggaaccaaacaaggacatcttctcctctac
aggattcggaaggatgttgtgccagcagctgtggcatcacctgaaagtggcagctgcaac
agatttgaagtgacactagagaaatccaataagaatttctccaaaaagattcagcagatc
catgtggtttcccagtttaagattctagtcagcttgttagaaaataatatttatgtccat
gacctattgacatttcaacaaatcactacggtttcaaaagcaaagggagcatcgctgttc
acatgtgacctccagcacatagagactggtgaggaggtgttgcggatgtgtgtagctgtg
aaaaagaagctgcagctctatttctggaaggacagggaatttcatgaattgcagggggac
tttagtgtaccagacgtgcccaagtccatggcatggtgtgaaaattctatctgtgtgggt
ttcaagagagactactacctcatccgggtggatggaaaggggtccatcaaagagctcttc
ccaacaggaaagcagctggagcccttagttgcccctctggcagatagaaaagtggccgtg
ggtcaggatgatctcaccgtggtgctcaatgaggaggggatctgcacacagaaatgcgcc
ctgaactggacggacataccagtggccatggagcaccagcctccctacatcattgcagtg
ttgcctcgatatgtggagatccgaacactcgagccaaggctcctggtccagagcattgaa
ttgcaaaggccccgtttcatcacttcaggaggatcaaacattatctatgtggccagcaat
cattttgtttggagacttattcctgtccccatggcaactcagatccaacagctgctccag
gacaaacagtttgagttggctttgcagcttgcagaaatgaaagatgattctgacagtgag
aagcaacagcaaatccatcacatcaaaaacttgtatgccttcaacctcttctgccagaag
cgttttgatgagtccatgcaggtctttgctaagctcggcacagatcctacccatgtgatg
ggcctgtacccggacctgctgcccacagactacaggaagcagctgcagtatcctaacccc
ctgcctgtgctctctggggctgaattggagaaggctcacttagctctgattgactacctg
acacagaaacggagccagttggtaaagaagctgaatgactctgatcaccagtctagcact
tccccgctcatggaaggcactcccaccatcaaatccaagaagaagctgctgcagatcatc
gacaccaccctgctcaagtgctacctccataccaacgtggccctggtggcccccctgctg
cgcctggagaacaatcactgccacatcgaagagagcgagcacgtgctgaagaaggctcac
aagtacagtgagctcatcatcctgtatgagaagaaggggctccatgagaaagccctgcag
gtgctggtggaccagtccaagaaagcaaactcgccgctgaaaggccacgagaggacggtg
caatatctgcaacatctgggcacagaaaacctgcatttgattttttcctactcggtgtgg
gtgctgagagacttcccagaggatggcctgaagatattcaccgaagacctcccggaggtg
gagtctctgccccgggaccgagtgctcggcttcctggtagagaattttaagggcctggct
attccttatctggagcacgtcatccacgtctgggaggagacgggctccaggttccacaac
tgcctgatccagctctactgcgagaaggtgcaaggtctgatgaaggagtacctcctggcc
ttccctgcaggccaaactccagttcctgctggagaggaagagggtgagctgggagaatat
cgacggaagctccttatgttcttggaaatttccagctactacgacccgggccggctcatc
tgtgattttccttttgatggcctcttagaagaacgtgctctcctgctggggcgcatgggg
aaacatgaacaagctctcttcatctatgtccacatcctgaaagacacaaagatggctgag
gagtactgccacaagcattatgaccaaaacaaagatggcaacaaagatgtgtatctgtcc
ctgctccggatgtacctgtcgccccccagcgttcactgtctggggcccatcaagctggaa
ctgctggagccccaagccaacctccaggctgccctgcaggtcctcgagctgcaccacagc
aaactggacaccaccaaggccctcaacctcctgccagcaaatactcagattaacgagata
cgcatcttcctggaaaaggtcttggaaggaaatgcacaaaagaaacggttcaatcaagtg
ctcaagaaccttctccatgcagagttcctgcgggtgcaggaagagcggattttacaccag
caggtgaagtgcatcatcacggaggagaaggtgtgcatggtgtgtaagaagaagattggg
aacagcgcatttgcgaggtaccccaatggagtggtggtgcactacttctgttccaaagag
gtgcacccggcggacacctga
DBGET
integrated database retrieval system
