Myotis yumanensis (Yuma myotis): 139017393
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Entry
139017393 CDS
T10762
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
myum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139017393 (PCF11)
Messenger RNA biogenesis [BR:
myum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
139017393 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139017393
NCBI-ProteinID:
XP_070281827
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MSEPTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
TSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKTPHQIPLQPEKSRAGPSLQIQDLKGTNRDPRLN
RMSQHSSHGKDQSHRKEFLMNTLNQSDIKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKFSHTKDLKNQESECPRVSDMSKRDPRLKKHLQDKADSKDDDI
KEKRKTSEKKDKDEHMKSSEHRLVGSRNKIVNGIVQKQDVITEDSEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTAKAGKIRQSGCKQSHMEDFMPPSR
EERNAKRSTKQDVRDPRRIKKTEEERPQETTSQHSTKSGTEPKENVENWSSSKSNKRWKS
GWEENKSLQQGDDHSKSPHLRHRESWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPSEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRSYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDADKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTRDGPTKMI
FEGPNKLSPRIDGPPAPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGACPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRGQPVSGHRFEGGHGPSGAAIRFDGPHGQPAGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQPG
PQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGARFDNHPSQRLESVSFSQ
TGPYNEPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLSRASGHYFD
EKNLQSSQFGNFGNLPAPITVGNIQASQQVLTGVAQPVPFGQGQQFLPVHPQNPGAFVQN
PSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVAAQPPTEEEEDQN
EDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNR
TEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQ
SVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDC
TPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEEQIDTPPACTEESIATPTEIKTEND
TVESV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccgacgccggccgaggccggtaccgcgggggcccgggaggacgcctgtcgg
gattaccaatcatccctcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaacgttggacgagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgagatattcccattgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaagagccttcaacacctggcacagtggtc
acttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacccaa
gaacaactaataaggcagcagttacttgcaaaacaaaaacagttattagaacttcagcag
aaaaagctggagcttgaactagagcaagctaaagcacaactggcagtttctcttagtgtt
cagcaggagacatccaacttaggtcctggatctgcaccatccaaattacatgtttcacaa
attccccctatggcagttaaaactccccatcagattcctttgcaacctgaaaaaagccgt
gcaggtccatccttacaaattcaggacttgaaaggaacaaaccgggatccccgtcttaat
aggatgagtcagcattcttctcatggaaaagatcaaagtcacagaaaagaattcctaatg
aatacattaaaccaatctgatattaagacaagtaaaactataccttctgaaaaactaaat
tcatccaaacaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccag
ttagattctaaatctaaatctaaatctaaatcaccatcacctttgaaaaacaaattctct
cacacaaaagacttgaaaaatcaagaatctgaatgcccaagggtgtctgacatgagtaag
agagatccaagattaaaaaaacatcttcaagataaggctgatagcaaagatgatgatata
aaagagaagagaaaaacttcagaaaaaaaagataaagatgagcatatgaaatcatctgaa
catagactggttggaagtcgaaataaaatcgttaatggcattgtacaaaaacaagatgta
ataacggaagactcagaaaaacagggaacaaaaccagggagatcaagtactagaaagcga
tcaagatcgagatcacccaagtctcggtcaccaattatacattctcctaagagaagagat
aggcgatcacccaaacgaaggcaaaggagtatgtctccaacctcgacagccaaagctgga
aagattcgccaatctggatgtaagcagtcacatatggaagactttatgccaccttccagg
gaagaaagaaatgctaagagaagtactaaacaggatgttcgagatccaaggcgaataaaa
aagactgaagaggaacgaccgcaagaaactacaagtcagcattctacaaagtcaggcact
gagccgaaggagaatgtagaaaattggtcaagttccaagtctaacaaaagatggaaatct
ggttgggaagaaaataaaagcttacaacaaggtgacgaccatagtaaatctcctcatcta
aggcatagggaaagctggtcaagcactaaaggaattttgtcacctcgagccccaaagcaa
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgcgatagtccttcagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgttcttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtgcgagaagagcagaggtcaccattcaatgat
cgttttccacttaagcgacctagatatgaagatgcagataaaccatttgtagatagccca
gcatcacgattcgccggcctcgatacaaatcagcgacttacagcattagctgaagacaga
ccattatttgatggacctagtaggccatcagtaacaagagatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctagaattgatggacctcctgcaccaggttctctt
cgatttgatgggtcacctggacaaatggggggaggtggtcctttgagatttgaaggacca
caaggtcagctaggaggcgcatgtcctttgagatttgaaggtcctccaggaccagtaggg
acacctttgcggtttgaagggccaattggtcaagcaggcggaggtggttttcggtttgaa
ggttcccctggtctgaggtttgagggatctgcaggtggcctacgatttgaaggaccaggg
ggccagcctgtgggtgggctcaggtttgagggacatcggggtcaacctgtgggaggtctg
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatccccgaggt
cagcctgtaagtggacatagatttgaggggggtcatggtccatcaggagctgcaattagg
tttgatggacctcatggtcagccagcaggtgggatcagatttgagggccctttgctacag
cagggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtctgaggttt
gaaggacaacataatcaacttggtggaaaccttaggtttgagggtccacatggtcaacca
ggggttgggatcaggtttgagggacccttagtccaacaaggaggtggaatgaggtttgag
ggtcctgtaccaggaggtggactgagaattgaagggcctctgggtcaaggtggtccaaga
tttgaaggttgtcatgctttaaggtttgatgggcagccaggtcagccatcactcttacca
agatttgatggattacatggtcaaccaggtcctagatttgaaagaactggtcaaccaggc
ccacagagatttgatggaccacctggacagcaggttcaaccaagatttgatggtgttcct
caaagatttgatggtccacaacaccagcaagcatcaaggtttgatattccccttggtctt
caaggcgcacgatttgacaatcatccttcacaaaggcttgaatctgtttctttcagtcag
actggtccatataatgagccgcctggcaatgcttttaatgccccatcccaaggactgcaa
ttccaaagacacgaacaaatatttgattcacctcaaggaccaaattttaatggaccacat
ggccctgggaaccagagtttctcaaatccccttagcagagcttctggacactattttgat
gaaaagaatcttcaaagttctcaatttggaaactttggcaatttacctgctccaataaca
gtaggaaacattcaggcatctcaacaggttctgactggtgttgctcaaccagtaccattt
ggccagggacaacaatttttaccagttcatccacaaaatcctggagcatttgttcagaat
ccttcaggagcccttcctaaggcatatcctgataatcacctcagtcaggtggatgtaaat
gaattattttcaaaactgctaaaaacaggaattctcaaattgtcccagcctgattcagct
acaacacaagtaaatgaagttgctgctcagcctcccactgaagaggaggaagatcaaaat
gaagatcaagatgttccagatcttaccaattttacaattgaagagttaaaacagcgttat
gatagtgttataaatcgactgtacactggtattcagtgttactcttgtggaatgaggttt
acaacatcacagacagatgtttatgcagatcacttggactggcattatcggcaaaataga
actgaaaaagatgttagcagaaaagtcactcatagacgttggtactacagtttaacagac
tggatagaatttgaggaaatagctgatttggaagaacgtgcaaagagccagttttttgaa
aaggtgcatgaagaagttgtgctcaaaactcaggaagctgctaaagaaaaggagttccaa
agtgtaccggcagggccagctggagcagtggagagttgtgaaatctgtcaagaacaattt
gaacaatactgggatgaagaagaggaggagtggcatttaaagaatgccattagagtggat
ggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgattgt
acaccatctcccagcaagacaccagttgaaaaccctttgaacattatgttgaacattgtc
aaaaatgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacaaattgatacc
ccaccagcttgtacagaggagagcatagcaacacccactgaaattaaaactgaaaatgat
acagttgagtcagtttaa
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integrated database retrieval system
