Myotis yumanensis (Yuma myotis): 139018974
Help
Entry
139018974 CDS
T10762
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139018974 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myum03019
]
139018974 (PATL1)
Messenger RNA biogenesis [BR:
myum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139018974 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
139018974 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
139018974
NCBI-ProteinID:
XP_070284178
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PAAVSEQTGNGERDEMDLLGDHEENLAERLSKMVIENDLEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCNV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPPQQHPPGPGPLVQNLRSQAPMFRADTTHLHP
QHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVAKIQMM
QLQSTDPYLDDFYYQNYFQKLEKLSAAEELQGDGPKKERTKLITPQVAKLEHAYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDY
ERRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDLFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQL
MNLPQSAAAPAPSNPHLTAVLQNKFGLSLLLVVLSRGEDLQSSDPATESTENNQWMQVMF
MATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaggatgcatttcaa
ggcctgggagaggaagatgaagaaattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaggcacacgagcgactggctgaattggaagagaagcta
ccggcagcagtcagtgaacaaacaggcaatggagaaagggatgagatggacttgttgggt
gaccatgaggaaaatctggcagaaaggctcagtaagatggtgattgaaaatgatctagaa
gatccagccatcatgagggcagtgcagaccaggccagttttgcaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcccccacag
ggcccagaagatgatcgggacctttccgagcgtgcattaccaaggcggtcaacttcacct
atcattgggagccctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtacccagcttcaaccaacagattctgtgtccgaagcctgtccatgttcggccaccaatg
ccaccacgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcaatgtc
ccgaactcttccctactgggtcaccctttccctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccgcttgctgccatgaatcccaaactg
ctgcaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccacctcctgctacaccacctcctccacagcagcacccccctggcccaggacctctt
gtgcaaaacttacgatctcaggccccaatgtttagagcagacaccactcatcttcatcca
cagcaccgtcgacttttgcatcagagacagcaacagaatagaaatcagcatcggaatctc
aatggtgcaggagatagaggaagtcaccggagcagtcaccaagatcatctccggaaggat
ccatatgccaatctcatgttgcagcgagaaaaggactgggtcgccaaaatccagatgatg
caactgcaaagcactgatccctacctggatgatttttattatcagaattactttcaaaaa
ctggagaaactgtcagctgctgaagaattacaaggtgatggtcctaaaaaggagcgcacc
aagctcattacccctcaggtggccaaactggagcacgcctataagccagtgcagtttgag
ggctctttgggaaagcttaccgtctctagtgtgaataatccccggaaaatgattgatgct
gttgtgacatctcggagtgaggatgatgaaacaaaagaaaaacaggttcgggacaagaga
cgaaaaacccttgtcataattgagaaaacctacagtttgctcctggatgtggaagattat
gaaaggcgttacctcctaagtctagaagaagagcgacctgccctgatggatgaaagaaag
cacaaaatttgcagcatgtatgacaacttaaggggaaaattacctggacaagagaggcca
agtgatgacctctttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgc
attctccctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaac
ctcccattccttatcaagaaggatgcacaagatgaggtgctgccgtgcttattgagtccc
ttttccctcctcctctatcatcttccgtcagtgactgtcaccagccttctgcaacagcta
atgaacctacctcagagtgcagctgcaccagcaccttctaatcctcacctcactgctgtt
ctccagaacaagtttggcctgtcactgctccttgttgtcctgagccgtggggaagaccta
cagagttcagaccctgctacagaatcaacagaaaacaaccagtggatgcaagtgatgttc
atggcaacccgagaacttctgaggattccccaggcagccctagccaagccaatctctatc
cccacaaacctagtatccctcttttctcgctatgttgaccgacagaaactgaatttgctg
gagacaaaactgcagctagttcaggggatacgataa
DBGET
integrated database retrieval system
