Myotis yumanensis (Yuma myotis): 139019678
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Entry
139019678 CDS
T10762
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139019678 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myum03021
]
139019678 (CPSF3)
03019 Messenger RNA biogenesis [BR:
myum03019
]
139019678 (CPSF3)
Transcription machinery [BR:
myum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139019678 (CPSF3)
Messenger RNA biogenesis [BR:
myum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139019678 (CPSF3)
U7-dependent histone pre-mRNA processing factors
139019678 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
139019678
NCBI-ProteinID:
XP_070284761
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPANDMYADTVTTVVLEVQSNPKIRKGAVQK
ASKKLEMHVYSKRLEVMLQDIFGEDCVSVKDGALLSVTVDGKTANVNLETRTVECEEGSE
DDECLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgatccccgcggaggagagcgaccagctgctgatccggcccctgggagctggc
caagaagtaggacgatcatgtattattctggagttcaaaggaagaaaaataatgctggac
tgtgggatccaccctggcctagaaggaatggacgctcttccttacatcgatctaattgac
ccggcggagattgacctcctgctcattagtcacttccatttggatcactgtggtgctctg
ccctggtttctacagaagacgagtttcaaaggaaggacattcatgactcacgctactaaa
gccatctacaggtggctcctttcagattacgtcaaagtcagtaacatatcggcggacgac
atgctgtacaccgagaccgacctggaagagagcatggacaaaatcgagaccatcaacttc
catgaagttaaggaggtcgcgggaatcaagttttggtgttaccacgcgggccacgtgctc
ggagctgccatgttcatgattgagatcgcgggcgtgaagcttttgtatacaggtgacttc
tcaagacaagaagacagacacttaatggcagctgagattccaaatattaagcctgacatt
cttatcattgaatcgacgtatgggacccacatccacgagaagcgggaagagcgagaggca
cgattctgcaacacggtccacgatattgtgaacagaggcggccggggcctcatccctgtc
tttgctctcgggcgggctcaggagctgctcctgattctagatgagtactggcagaaccac
ccggagctccatgatattccaatatactacgcatcatctttggccaagaagtgtatggcc
gtgtaccagacatacgtgaacgccatgaacgacaaaatccgcaagcagatcaacatcaat
aatccctttgttttcaagcacattagtaaccttaagagcatggaccattttgacgacatt
gggcccagcgtggtgatggcctccccgggcatgatgcagagcggcctgtccagggagctc
ttcgagagctggtgcacggacaagaggaacggcgtcatcatcgcaggctactgtgtggag
ggcacgctggccaagcacatcatgtctgaacctgaagagatcacgaccatgtctggacag
aagcttccgttgaaaatgtctgttgattacatttctttctccgctcacacagattaccag
caaaccagcgaattcatccgcgctttgaaaccgcctcacgtgattttagtccatggagaa
cagaacgaaatggcccgattgaaagcagccctgattcgagaatatgaagataatgacgaa
gttcacatagaggttcataatcctcggaacacagaagccgtgaccttgaacttcagaggg
gaaaaactagccaaggtcatgggctttttagcggacaagaagccagaacaaggccagcgg
gtctcgggaatccttgttaagagaaactttaattatcacattctttctccttgtgacctg
tccaattatactgacctggccatgagcactgtgaagcagacccaagccattccctatact
gggccctttaatttgctctactaccagctacagaaactgacaggtgatgtagaagaatta
gaaattcaagaaaaacctgctttgaaagtgttcaaaaatattactgtaatacaggaacca
ggaatggtggtgttagaatggctcgctaaccctgccaacgacatgtacgcagacactgtg
acaaccgtggtcctcgaggtgcagtcaaacccgaaaatcagaaaaggtgccgtgcagaag
gcgtctaagaagttggagatgcacgtgtacagcaagaggttggaggtcatgctccaggac
atatttggagaagactgtgtgagtgtgaaagacggcgccctgctcagtgtcaccgtggac
gggaaaacggcgaacgtgaacttagagacccggactgtcgagtgtgaggaaggaagcgag
gatgacgagtgtctccgggaaatggtggagctggccgcacagaggctgtacgaggccctc
acgccggtgcactga
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integrated database retrieval system
