Myotis yumanensis (Yuma myotis): 139019717
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Entry
139019717 CDS
T10762
Symbol
SDC1
Name
(RefSeq) syndecan-1 isoform X1
KO
K06257
syndecan 1
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum04512
ECM-receptor interaction
myum04514
Cell adhesion molecule (CAM) interaction
myum04820
Cytoskeleton in muscle cells
myum05144
Malaria
myum05205
Proteoglycans in cancer
myum05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139019717 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
139019717 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139019717 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
139019717 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
139019717 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
139019717 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myum04131
]
139019717 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
myum04090
]
139019717 (SDC1)
00535 Proteoglycans [BR:
myum00535
]
139019717 (SDC1)
Membrane trafficking [BR:
myum04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
139019717 (SDC1)
CD molecules [BR:
myum04090
]
Proteins
139019717 (SDC1)
Proteoglycans [BR:
myum00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
139019717 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
139019717
NCBI-ProteinID:
XP_070284837
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MRRAALWLSLCALALRLQPVLPQIVAANVPPEDQDGSGDDSDNFSGSGAGALQDFTVSQT
TSFTWKDMGLLTVMPTAPEPTGADTMAASTSILPAGARDQERDTVLLAHLEPGFPDREKT
TQPPSETTPHPTTHRASTTRATTAQAPVTLHPLRDMQPDHHKTSTPKGRGPLDPHTANPH
TADPHTADPHTADPHTAVMEERDPWVTGSTAEAGTVTQFPKGEGSGEEDFTFDVSTESTT
WSPEEREELKEPPVGRGATGASQGLLDRKEVLGGVIAGGLVGLICAVCLVGFMLYRMKKK
DEGSYSLEEPKQANGGAYQKPTKQEEFYA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctctggctctcgctctgcgcgctggcgctgcgcctgcagcccgtc
ctcccgcaaattgtggctgcaaatgtgccccccgaagatcaggatggctccggcgacgac
tctgacaacttctccggctcgggtgcaggcgctctgcaagatttcaccgtgtcacagacc
acctccttcacctggaaggacatggggctcctgacggtcatgcccacggctccagagccc
accggcgccgacaccatggctgcctccacctccatcctgcccgctggagcgagagaccag
gagcgagacacagtgctcctggcccacctggaacctggctttcccgaccgggaaaagacc
acccagccacccagcgagaccacaccacaccccaccacccaccgggcatcgacaaccaga
gccaccactgcccaggcacctgtcaccttgcatcccctcagggacatgcagcctgaccac
cacaagacctcaacccccaaaggccgtggcccactcgaccctcacacggccaaccctcac
acggccgaccctcacacggccgaccctcacacggccgaccctcacacggccgtcatggag
gagagagacccttgggtcaccgggagcactgctgaggctgggaccgtcacccagttcccg
aaaggcgagggctctggggaggaggacttcaccttcgacgtgtctacggagagcacaact
tggtctcccgaggaacgagaggagctgaaggaacccccagtgggtcgtggggccaccggg
gcctcacagggcctcctggacaggaaggaagtgctgggaggggtcatcgccggaggcctg
gtggggctcatctgcgccgtgtgcctggtgggcttcatgctgtaccggatgaagaagaag
gacgaaggcagctactccttggaggagccgaagcaagccaacggtggggcctaccagaaa
cccaccaagcaggaggagttctatgcctga
DBGET
integrated database retrieval system