KEGG   Myotis yumanensis (Yuma myotis): 139019717
Entry
139019717         CDS       T10762                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1 isoform X1
  KO
K06257  syndecan 1
Organism
myum  Myotis yumanensis (Yuma myotis)
Pathway
myum04512  ECM-receptor interaction
myum04514  Cell adhesion molecule (CAM) interaction
myum04820  Cytoskeleton in muscle cells
myum05144  Malaria
myum05205  Proteoglycans in cancer
myum05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:myum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139019717 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    139019717 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    139019717 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    139019717 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    139019717 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    139019717 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:myum04131]
    139019717 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:myum04090]
    139019717 (SDC1)
   00535 Proteoglycans [BR:myum00535]
    139019717 (SDC1)
Membrane trafficking [BR:myum04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    139019717 (SDC1)
CD molecules [BR:myum04090]
 Proteins
  139019717 (SDC1)
Proteoglycans [BR:myum00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   139019717 (SDC1)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 139019717
NCBI-ProteinID: XP_070284837
LinkDB
Position
Unknown
AA seq 329 aa
MRRAALWLSLCALALRLQPVLPQIVAANVPPEDQDGSGDDSDNFSGSGAGALQDFTVSQT
TSFTWKDMGLLTVMPTAPEPTGADTMAASTSILPAGARDQERDTVLLAHLEPGFPDREKT
TQPPSETTPHPTTHRASTTRATTAQAPVTLHPLRDMQPDHHKTSTPKGRGPLDPHTANPH
TADPHTADPHTADPHTAVMEERDPWVTGSTAEAGTVTQFPKGEGSGEEDFTFDVSTESTT
WSPEEREELKEPPVGRGATGASQGLLDRKEVLGGVIAGGLVGLICAVCLVGFMLYRMKKK
DEGSYSLEEPKQANGGAYQKPTKQEEFYA
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctctcgctctgcgcgctggcgctgcgcctgcagcccgtc
ctcccgcaaattgtggctgcaaatgtgccccccgaagatcaggatggctccggcgacgac
tctgacaacttctccggctcgggtgcaggcgctctgcaagatttcaccgtgtcacagacc
acctccttcacctggaaggacatggggctcctgacggtcatgcccacggctccagagccc
accggcgccgacaccatggctgcctccacctccatcctgcccgctggagcgagagaccag
gagcgagacacagtgctcctggcccacctggaacctggctttcccgaccgggaaaagacc
acccagccacccagcgagaccacaccacaccccaccacccaccgggcatcgacaaccaga
gccaccactgcccaggcacctgtcaccttgcatcccctcagggacatgcagcctgaccac
cacaagacctcaacccccaaaggccgtggcccactcgaccctcacacggccaaccctcac
acggccgaccctcacacggccgaccctcacacggccgaccctcacacggccgtcatggag
gagagagacccttgggtcaccgggagcactgctgaggctgggaccgtcacccagttcccg
aaaggcgagggctctggggaggaggacttcaccttcgacgtgtctacggagagcacaact
tggtctcccgaggaacgagaggagctgaaggaacccccagtgggtcgtggggccaccggg
gcctcacagggcctcctggacaggaaggaagtgctgggaggggtcatcgccggaggcctg
gtggggctcatctgcgccgtgtgcctggtgggcttcatgctgtaccggatgaagaagaag
gacgaaggcagctactccttggaggagccgaagcaagccaacggtggggcctaccagaaa
cccaccaagcaggaggagttctatgcctga

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