Myotis yumanensis (Yuma myotis): 139019881
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Entry
139019881 CDS
T10762
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum01524
Platinum drug resistance
myum03430
Mismatch repair
myum05200
Pathways in cancer
myum05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139019881 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
139019881 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
139019881 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
139019881 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myum03400
]
139019881 (MSH2)
DNA repair and recombination proteins [BR:
myum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
139019881 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
139019881
NCBI-ProteinID:
XP_070285261
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MAVQPRETLQLESVAEYAFVRFFQGMPEKPSTTVRLFDRGDFYTAHREDALLAAREVFKT
QGVIKYIGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSTSIGTVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALMIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAVASLSAVIKFLELLSDDSNFGQFELTTFDFHQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LENYKGKHQTLLLAVFVNPLVDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDGLEKKMQSTLVSTARDLGLESGKQIKLDSNSQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSALTSLNEEYTKNKTEYQEAQDAIVKEIVNISSGYVEPMQTFNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGASQESDEMEPAAKRCHLEREQGEKIIQEFLSKVKQMPFIEMS
EENITMKLKQLKAEVIAKNNGFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgagggagacgctgcagctggagagcgtggcggagtatgcgttcgtg
cgcttcttccagggaatgccggagaagccgagcaccacggtgcgcctcttcgaccggggc
gacttctacacggctcaccgggaggatgcgctgctggccgcccgggaggtgttcaagacg
cagggggtgatcaagtacatcgggccggcaggagcaaagactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcggcagtatagagtt
gaagtttataagaatagagctggaaataaggcctccaaggagaatgattggtatttggca
tttaaggcttctccgggtaatctttctcagtttgaagatattctctttggtaacaatgat
atgtcaacgtccattggtactgtgggtgttaaaatgtctacagttgatggccaaagacaa
gttggagttgggtatgttgactccatacaaaggaagctaggactgtgtgagttccccgat
aatgatcagttctccaatctggaggctctcatgattcaaattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatggggaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttccacaaaagatatttatcaagac
cttaaccggttgttgaaaggcaaaaagggagaacaggtgaatagtgctgtcttgccagaa
atggagaatcaggttgcagttgcatcattgtctgcagttatcaagtttttagaactcttg
tcagatgattcaaacttcggacagtttgaactgactacttttgactttcaccagtacatg
aaattggatattgcagcagtcagagcccttaaccttttccagggttctgttgaagatacc
actggctctcagtctctggctgcattgctgaataagtgcaaaaccccgcaaggacaaaga
ctggttaaccagtggattaagcagcctctcatggataagaacagaatagaagagagatta
aatttagtggaagcttttgtagaagatgcagaattgagacagtgtctacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaat
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttatacaggct
ctggaaaactataaaggaaaacaccagacattgttgttggcagtttttgtgaatcctctt
gttgatcttcggtctgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccacgaattccttgtaaagccatcatttgatcctaatctgagtgaa
ttaagagaaataatggatggtttagaaaagaagatgcaatcaacattagtaagtacagct
agagatctaggtttggaatctggcaaacagattaaactggattcaaattcacagtttgga
tattattttcgagtaacgtgtaaagaagaaaaagtccttcgtaacaacaaaaactttagt
accgtagatatccagaagaatggtgttaaatttaccaatagtgcattgacttctcttaat
gaagaatataccaaaaacaaaactgagtaccaagaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacattcaatgatgtgttagct
cagctagatgctgttgtcagctttgctcatgtatcaaatggagcgccagttccatatgta
cgaccggtcattttggagaaaggacaaggaagaattattttgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcccaatgatgttcactttgaaaaggat
aaacagatgtttcatatcattactggccccaatatgggaggtaaatcaacatatattcgc
caaaccggggtaatagttctcatggcccaaattgggtgttttgtgccatgtgagtcggca
gaagtgtccattgtggactgtatcttggctcgggtaggggctggtgacagtcaattgaaa
ggagtctccaccttcatggctgaaatgttagaaactgcctctattctcaggtctgcaacc
aaagattctttaataattatagatgaattgggaagaggaacctctacctatgatggattt
gggttagcatgggctatatcagagtacattgcaacaaaaatcggtgctttttgcatgttt
gcaacccattttcatgaactgactgccttggccaaccagataccaactgttaataatcta
catgtcacagcactaaccactgaagaaaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcaaagttttgggattcacgttgcagagcttgctaattttcctaggcatgta
atagagtgtgctaaacagaaggcccttgaactagaggagtttcagaatattggagcatca
caagaaagtgatgaaatggaaccagcagcaaagaggtgccatctggaaagagagcaaggt
gaaaaaatcattcaagagtttttatccaaggtgaagcaaatgccttttattgaaatgtca
gaagaaaacatcacaatgaaattaaaacagctgaaagctgaggtgatagcaaagaataat
gggtttgtaaatgaaatcatttcacgaataaaggttactacgtga
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