Myotis yumanensis (Yuma myotis): 139019883
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Entry
139019883 CDS
T10762
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum01524
Platinum drug resistance
myum03430
Mismatch repair
myum05200
Pathways in cancer
myum05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139019883 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
139019883 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
139019883 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
139019883 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myum03400
]
139019883 (MSH6)
DNA repair and recombination proteins [BR:
myum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
139019883 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
139019883
NCBI-ProteinID:
XP_070285265
LinkDB
All DBs
Position
Unknown
AA seq
1356 aa
AA seq
DB search
MSRQSTLYSFFPKSPAGLSNASKAPVKASGEGGAAAAAGASPSPSEEVARSEVGPGRSAS
PSEARNLNGGLRRSTTPAVSSSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIREKG
KSARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRADEALT
KDKIKRLELAVCDEPSEPEEEEMEVGATYTSDKNEEDNEIESEEEVRPKVQGSRRSSRQI
KKRRVISDSESDNGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLHSFVKVAPKRKRMVT
GNGSLKRKSSRKEMPPISKRATGISSETRSTLCAFSAAQNSESLAHISGRCDDNSRPAVW
YHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMKKWWQIKSQNFDLVI
FYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQ
TETPEMMEARCRKMAHISKHDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLLSLKEK
EEDTSGHTRVYGVCFVDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFERGNLSTET
KMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFKEKLNEDSGVVLPHVLKGMTSE
SDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSVIRPGAI
FSKVNQRMVLDSVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNP
FAINDRLDAIEDLMFVPDKITEVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMY
EETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDDFKSKILKQVITLQTKNPEGHFPDL
TVELNRWDTAFDHEKARKTGVITPKVGFDSDYDQALADIKENEQSLLEYLEKQRSRIGCR
TIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERR
DVSLKDCMRRLFYNFDKNYKNWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVVLLPKED
TPVFLDLKGSRHPCITKTFFGDDFIPNDILIGCEEKEEENGKASCVLVTGPNMGGKSTLM
RQAGLLAVIAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHA
TAHSLVLVDELGRGTATFDGTAIASAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRL
GHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFE
KTTHSLRLFREVCLASERSTLDAEAVHKLLTLIEEL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctcccgcggggctgagtaat
gccagcaaggccccggtcaaggcctcaggtgaaggcggcgccgccgctgccgccggggcc
tccccttcccccagcgaggaggtggcccggagcgaggtcgggcctgggcgctccgcgtcg
ccgtccgaggcgaggaacctcaacggagggctgcggaggtcgacaactcctgcggtttcc
tccagttcttgtgacttctcaccaggtgatttggtttgggccaagatggagggttatccc
tggtggccttgcctggtttacaaccacccttttgatggaacattcatccgtgagaaaggg
aagtctgcccgagttcatgtacagttttttgatgacagcccaacaaggggatgggttagc
agaaggctattaaagccatatacaggttcaaaatcaaaggaagcccagaaaggaggtcat
ttttacagtgcaaagcctgaaatactcagagcaatgcaacgtgcagatgaagccttgact
aaagataagattaagaggcttgaattggcagtgtgtgatgagccctcagaaccagaggag
gaagaaatggaggtaggtgcaacttatacatcagataagaatgaagaagataatgaaatt
gagagcgaagaggaagtgcggcctaaggtgcaaggatctaggcgaagtagccgccaaatt
aaaaaacggagagtcatatcagactctgagagtgacaacggtggctctgatgtggaattc
aagccagatgctaaggaggaaggaagcagtgatgaaataagcagtggagtgggggatagt
gacagtgaaggcctgcatagctttgtcaaagttgctccaaagcggaagagaatggtgact
ggaaacggctctcttaaaaggaaaagttcaaggaaggaaatgccccctatcagtaaacga
gcaactggcatttcctcagaaaccaggagtactttgtgtgctttctctgccgctcaaaat
tctgaatccctagcccacattagtggaagatgtgatgataatagtcgcccagctgtctgg
tatcatgaaactttagaatggctcaaggaggaaaagagaagagatgtacacaggaggcga
cccgatcatccagattttgatgcatctacactctatgtgcctgaggatttccttaattcc
tgtactcctgggatgaagaagtggtggcagattaagtctcagaactttgatcttgtcata
ttttataaggtggggaagttttatgagctgtaccacatggacgctcttattggagtcaat
gaactagggctggtattcatgaaaggcaactgggcccattctggtttccctgaaattgca
tttggccgatactcagattctctggttcagaagggctataaagtagcacgggtggaacag
actgagaccccagaaatgatggaggcaagatgccgaaagatggcacatatatctaagcat
gatagagtggtgaggagggagatttgtaggatcattactaagggtacacagacgtacagt
gtgctggaaggtgacccctctgagaactacagtaagtatcttcttagccttaaagaaaaa
gaggaagatacttctggccacactcgtgtatatggtgtatgctttgttgatgcctcactg
ggaaagtttttcataggtcagttttcagatgatcgccattgctcaaggtttaggactctt
gtggcacattatcctccagtacaagtcttatttgagagaggaaatctctcaacagaaacc
aagatgatcctgaagggttcattatcctcttctcttcaggaaggtctgataccaggctcc
cagttttgggatgcagccaaaactttgagaactcttcttgaagaaggatattttaaagaa
aagttaaatgaggacagtggggtggtattaccccatgtgcttaaaggtatgacttcagag
tctgattctatagggttgacaccaggagagaagagtgaattggccctctctgctctaggt
ggttgtgtcttctacctcaaaaaatgccttatcgatcaggagcttttatcaatggctaat
tttgaagaatatattcccttggattctgacatggtcagtgttataagacctggtgctatt
ttttctaaagtcaatcaacgaatggtgctagattctgtgacattaaacaacttggagatt
tttctgaatggaacaaacggttctactgaaggtaccctactagagaagattgatacttgc
catactccttttggtaagcggctcctaaagcagtggctgtgtgccccactgtgtaaccct
tttgctatcaatgatcgtttagatgctatcgaagacctaatgtttgtgcctgacaaaatc
actgaggttgtagatcttttaaagaagcttccagaccttgagaggctattgagtaaaatt
cataatgttgggtctccgttgaagagccagaaccacccagatagcagggctataatgtat
gaagaaactacatacagcaaaaaaaagattattgatttcctttctgccctggaaggattc
aaagtaatatgtaaaattatagggattatggaagaagtcattgatgactttaagtctaaa
attcttaagcaggtcattactctgcagacaaaaaatcctgaaggtcattttcctgattta
actgtagaactgaaccgatgggatacagcctttgaccatgaaaaggctagaaagactgga
gtgattactcccaaagtaggatttgactctgattatgaccaagctcttgccgacataaaa
gaaaatgagcagagcctcttggaatacttggagaaacagcgcagtcgaattggctgtaga
accatagtctattggggaattggtaggaaccgttaccagttggaaattccagagaatttc
accacccgtaatttgccagaagaatatgagttgaaatccaccaagaagggctgtaaacga
tactggaccaaaactattgagaagaagttggctaatttgataaatgcggaagaacggaga
gatgtatccttgaaggactgcatgcgacgactattctataactttgataaaaattacaag
aattggcaggctgctgtagaatgcatcgcagtgttggatgtcttattgtgcctggctaac
tatagtcgagggggtgatggtcctatgtgtcgtccagtagttctattaccaaaagaagac
actcctgtcttcttagaccttaaagggtcccgtcatccctgcattacgaagacttttttt
ggagatgactttattcctaatgacattctaataggctgtgaggagaaagaggaagaaaat
ggcaaagcttcttgtgtgcttgttactggacctaacatgggaggcaagtctacactcatg
agacaggctggcctattagctgtaattgcccagatgggttgttacgtacctgctgaagtg
tgtaggcttacaccaattgatagagtgtttactagacttggtgcctcagacagaataatg
tcaggtgaaagtacattttttgttgaattgagtgaaactgccagtatacttacacatgca
acagcacattctctggtgctggtggatgaattaggaagaggtactgcaacatttgatggg
acagcaatagcaagtgcagttgttaaagaacttgctgagaatataaagtgtcgtacatta
ttttctacccactatcattcattagttgaagattattctcaaaacgttgcagtgcgctta
ggacacatggcatgcatggtagaaaatgaatgtgaagatcccagtcaagagactattacc
ttcctttataaattcattaagggagcttgtcctaaaagctatggctttaatgcagcaagg
cttgctaatcttccagaggaggttattcaaaagggacatagaaaagcaagagaatttgag
aagacgactcattcactaagattatttcgggaagtttgcctggctagtgaaaggtcgact
ctagatgctgaagctgtccataagttgctgactttgattgaggaattatag
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