Myotis yumanensis (Yuma myotis): 139020669
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Entry
139020669 CDS
T10762
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum05014
Amyotrophic lateral sclerosis
Brite
Enzymes [BR:
myum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
139020669 (SETX)
5.6.2.5 RNA 5'-3' helicase
139020669 (SETX)
Transcription machinery [BR:
myum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139020669 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139020669
NCBI-ProteinID:
XP_070286493
LinkDB
All DBs
Position
Unknown
AA seq
2672 aa
AA seq
DB search
MSENPHPGISTERLTSLSRYIMSTCCWCTPGGVSAIEFLQHYASRTQSSEFQTANEDLCY
CLECVTEYHKARDKLPLLHEVLWELETLRLINHFEKSMKPEMKDDELYIIENDGEEQPFD
FTGQDFENKLRVPLLEILKYPYLLLHEHVNELCVEALCRMEQANCSFQVFEKQPGIYLFL
VHPNEMVRRWAILTAKGLGKVDRDDYYDLQEVLTCLFKVIELGLLENTDIYTTTVLEKGK
LIILPPHMYDTSNYKNYWLGICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMKRQSED
DSEDPFWPALHCFMVILDRLGSKVWGQLIDPIEAFQTIIDNASYNREIQNIRNSSVRAKS
EPESCLDDMVTCSQIVYNYNPEKTKKDSGWRSAICPDYCPNMYEEMETLASVLQSDIGQD
MRVHNSTFLWFIPFVQSLMDLNDLGMAYIVEVIHHLYSQVKDVLNQTAVVCDKVTEFFFL
ILVSVIELHRSKKCLHLLWVSSQQWVEAIVKCAKLPTTAFARNSEKSSANGSKGAAMITS
LSLHSMPSNSVQFACVQLIRSLLKEGYQLGQQTLCKRFWDKLNLFLRGNLSLGWQLTSQE
THELQTCLKQIIRNIRLKMPQYTALAELAPPCKTPPASNGKEESEQIGRACEKDIPYLER
CSPTCSKEPVKADVCQVQESSVVSKASNTIEEGNEQNYIKDLKLEDHLSAESHLKQSSKN
LSTERTQDRVKIHTKKQKSVKDNSSCLKQNCTSRNDPEEGCDRGVTMSTHLLTDSNTDSL
EKAPTSKEDLSLKNDVLGKTSKAKTKAQKSDICTELSHVIKKQNRKSAVVKNTVDLEGDL
TISDRKNFCSRTDTAGQKGDGFMQNFSLDPNDNLDHKNEEQKSLNSLLLKQLKNEELDVP
SSHENDCQIQECHVDNKDFISFTSMPKTSPCKDPVTLLGSSDKGINKSTDRVSSDLREQA
PSSPQCDILTDSQIDRDLHTLSLIAQARVSEFPLDSTQKSSFQLQRKVKDKRSFRANQNN
VRETCEQIIIISDSDEDGDEQTLDSEKHIKQDKMCIEKERPGQGTSKANMNVDMKLTKEE
KIEEFEDSGSQVFEFESQQKVFSVWQDQKTDHGNSVQEDECLTHIVDITNDWGYDTDYAM
SEEVTKNEAEGTEHAKPQSDSSVEEVCEIKGKKPKRKQFKKMAKDSLRPSSSVRNEDQSD
TLNERDLTENDTKIADIRTSSNSGVERATLVSLKKSSPKNRTYSKVDRRASVSKAPKKKH
SDTKKGQNKAPNYISCRNTPAIVLPKKFRQCPEPTSKAEKLGLKKAPRRAVVLSQRSLDM
IGELRNHGKTVGEIGTPKKAKLISPQTLPGNDKKLLVSQDRPFQRQRRPKSHRNRQRLNG
SADTTRAGPRAAQNSDSVIPDIDRSGDSNKGGTEGMANSSGDQSIKCVSPEQGPRKEKHV
AQVAGDAFLLSPCSSPVLNGRVPTNEITVCTPEDPLGGGNLTGHHLEVPTLKRGQLDSDS
DMEDDIFLTQHDPRDMDLCSQMQNGDNRLIEEVHWKRVHVEESVNRPQSESLSSTRCKYK
DCVETVKSQGEYCSKHSEAKAADEDVFRKPALPLSASKPLRPSTTKIFSSSSTSRIAHLS
KSLESASASPGLKNKSNGGQPVSKVPQPASPLSPKPRAEVKSLYNIPHSPTPNNSSRQAF
KLPFGECRPFSSPAIFLSSQTISDTFIKEVLKWKYEMFVKFDQCGPPTSLCQAISRSVPV
RFQDCEDYFSVFFPLVLLNAFETVAQEWINSPNRGKFYELQLRKFPGEYKKYWEFVVSLE
ECELSKQLYPKENDLVFLVPERLKGEKRELEGNSIQASREYHCAYVQRFRRTSVMHNGKY
ECSLLIQTQDKFPVNVNETVRCVVISSLVTTQRKLKAMSLLNSRNQLARAILNPNPMDFC
TRNLLTTTSEGINAYLRDFNDDQKKAIETAYAMVKHSPAVAKICLIHGPPGTGKSKTIVG
LLYRLLTERRGQLDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKERCKNKKNPLGN
CGDINLVRLGPERSINNEVLRFSLDNQVNHKMKKDLPSYVQEMHRRKEQLDHQLDELSRQ
RALSRYGRGIQRQELDEKIAQVSKERQELASKIKEVQGRPQKTQSNIILESHIICCTLST
SGGLLLESAFRGQGGVPFSCVIVDEAGQACEVETLTPLIHRCNKLVLVGDPKQLPPTVIS
LTAQDYGYEQSMMARFCKLLEENVEHHVSGRLPVLQLTVQYRMHPDICLFPSNYIYNKSL
KTHKGTESTRCSSSWPFQPYLVFDVGDGSERRENDSYVNIQEIKLVIELIKLLRDKGRDV
NFRSVGIITHYKAQKMKILKELDKEFEGRGLAEVDTVDAFQGRQKDCIIVTCVRANATQG
SIGFLASLQRLNVAITRAKYSLFILGHLRTLMDNQHWNHLIQDAQRRGAIIKTCDKNYKQ
DAMKILKLKSVVLQRSLTYPPSAAPEGSSPQGGSPGRDQNRTLLNDSLYHASLDAKEAAD
NVAGKDLERPPVKDQLRDPRLLRRMGRSAEAPGNCLRDPEPRGPQHSEAAPPSVVPGFPV
SPQTLDRALKLCMATWSSHRPHVSCEPPAASIDSTNESDQQGGHSHQREARAVSDRDQEM
PSPGNHHLKRSSSWDDGRAEKEEDSGSKKRKL
NT seq
8019 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaatcctcacccaggaatctcgactgagaggctcacatctctatccaggtac
ataatgagcacatgttgctggtgtacgccaggtggcgtttccgccattgagttcctacag
cactatgcatccaggacccagtccagtgaattccagacagcaaatgaagacctctgctac
tgcttagagtgtgtgaccgagtaccacaaagcaagggacaaactgccattgttgcatgag
gttttatgggaattagaaaccttacgtctcataaatcactttgaaaaatctatgaaacca
gaaatgaaagatgatgaattatatatcatagaaaacgatggagaggaacaaccgtttgac
ttcactggccaagactttgagaataagcttcgagttcctcttctcgaaatcctgaaatac
ccttatctgcttttacatgagcatgttaatgagttatgtgtcgaagcactttgtcggatg
gaacaagccaattgctcctttcaggtttttgagaaacagcccggaatctatttgtttttg
gtccatcccaacgaaatggttcgtcgttgggctatcctgactgcaaaaggcttgggaaaa
gtggacagagacgattattatgacttacaagaggttttgacttgcctttttaaagtcatt
gagttggggcttttagaaaatacagacatttatactactactgtccttgagaagggtaaa
ttgatcatcctgcctccacacatgtatgacacttccaactacaaaaactattggttaggg
atttgcatgctgctgaccattctcgaggagcaagccatggattcactgttgttgggctca
gacaaacagaatgatttcatgcagtcaatacttcacaccatgaagaggcagtcagaggat
gatagtgaagatcctttctggccagcattgcactgtttcatggtcattttggatcgcctg
ggatctaaggtctggggtcaacttattgatcctattgaggcctttcagaccattatcgac
aatgcaagctacaacagagagatccagaatatacggaacagctctgtgagggccaagtca
gaaccagagtcgtgtctggatgatatggtgacttgcagccagattgtgtacaattataac
cctgaaaagaccaaaaaggattcagggtggagatcagccatttgcccagattattgtcct
aacatgtatgaagaaatggaaacattagccagcgtgcttcagtcagatattggtcaagac
atgcgtgttcacaacagcacatttctgtggttcatcccttttgttcagtccctcatggat
cttaatgatttgggtatggcttacatagtagaggtcatccaccatctgtactcccaagtc
aaagatgttctcaaccaaacagctgtggtgtgtgacaaagtcactgaattttttttccta
attttggtgtcggtgattgaactacatagaagtaaaaaatgtttgcatttgctgtgggtt
agctcccagcagtgggtagaagccattgtgaaatgtgccaagcttcccaccactgcattt
gcacggaattctgagaagtcatctgccaatggctccaaaggagcagcaatgataacgtct
ctgtcactgcattcaatgccatctaactctgtacaattcgcttgtgtgcagctcattaga
agtctccttaaagaaggttatcagcttgggcagcagactctttgtaagcgattctgggat
aagctcaacttattcctgagaggaaatttatctctaggttggcagttgactagtcaggaa
acccacgagttacaaacttgtttaaagcaaattattagaaacataagattgaaaatgcct
caatatactgctttggcagagctggctcctccatgtaaaacccctcctgcctctaatggt
aaagaagaaagtgaacaaatagggagggcatgtgaaaaagacatcccctatctggaaagg
tgcagcccaacatgttctaaagaaccagtgaaagctgatgtatgtcaagtacaagagagt
agtgtagtaagcaaagcaagtaacactatagaagaaggtaatgagcaaaattatataaaa
gatttgaaactagaagaccatctctcagctgagtcacacttaaagcagagtagtaaaaac
ctttccactgaaagaactcaagatcgagttaaaatacacacaaagaagcagaagtctgta
aaagataattcctcctgtttgaaacagaactgtacttcaagaaatgatccagaagaggga
tgtgacagaggagtaactatgtcaacacatttgttgactgattctaacactgattctctg
gaaaaggcacccacatcaaaagaggatttatctctaaagaatgatgttcttggcaaaacc
tcaaaagcaaaaactaaggcacagaaaagtgacatttgtactgagttatcccatgtaata
aagaagcaaaacaggaaaagtgccgtggtcaaaaacactgtggacttagagggagacctg
actatctctgaccgtaagaatttctgttcaaggacagatactgcaggtcagaaaggtgat
ggcttcatgcagaacttttctttagaccctaatgataatctggatcataaaaatgaagaa
cagaaatctcttaacagtttattgctgaaacagttgaagaatgaagagttagatgttcct
tcttcccatgaaaacgattgtcaaatacaggaatgtcatgttgataataaagattttatc
tcatttacttccatgcctaaaacatctccctgtaaagatcctgtgactttacttggatca
agtgataaggggattaacaagagcactgatcgagtttcttctgacctgagagaacaggcc
cctagcagtcctcagtgtgacatcctaacagattctcagatagacagagacctccacaca
ttatctttaatagctcaagcccgtgtcagtgagtttccattagattcaactcaaaaaagc
tcattccagttacaaagaaaagtaaaagataaaagaagtttcagagccaaccaaaataat
gtcagggaaacctgtgaacaaattattattatttcagattctgatgaagatggtgatgaa
caaactctagattctgagaaacacattaaacaagataaaatgtgcattgagaaagaaagg
ccagggcagggaacttcaaaagctaatatgaatgtggacatgaagctaacaaaggaagaa
aagatagaggagtttgaggactctggctctcaggtttttgagtttgaaagccaacagaaa
gtgttttcagtttggcaagatcagaaaacagaccatgggaattcagttcaagaggatgaa
tgtttgactcatatagtagatatcacaaacgattggggttatgatacagattacgctatg
tctgaagaagttaccaaaaatgaagcagagggcactgagcatgcaaaaccacaaagtgat
agttccgttgaggaagtttgtgaaattaaaggaaaaaaacccaagagaaaacaatttaaa
aaaatggctaaagactctttaaggccttcttcttctgtcagaaatgaggaccaatctgat
actcttaatgagagggatctaactgaaaatgatactaaaattgcagacataagaacatct
tccaattcaggtgttgagagagccactctggtctccctgaagaagtcatctccgaagaat
cgaacttactccaaagtggatcggagagcctcagtttctaaagcgcctaagaaaaagcat
tcagataccaaaaaagggcagaataaagctccaaattacataagctgcaggaacactcct
gctatcgtgctaccaaagaaatttcgccagtgtcctgaaccaacttcaaaggctgagaaa
cttggtctgaaaaaggctcctcgtagggcagttgtgttgtctcagcgatctttagacatg
ataggtgaattacgcaaccatggcaaaactgttggagaaattggtaccccaaaaaaggct
aaactaatttctcctcagactcttcctgggaacgataagaaactgctcgtgagtcaagat
cgtccatttcagaggcagaggagacccaaatctcatcgaaacagacaaagacttaatggc
agtgcagacactacaagagcaggaccacgtgcagcccagaattctgacagtgtaatacca
gatatagataggtcaggtgacagtaacaaaggaggaactgagggcatggcaaacagtagt
ggagatcagtccataaaatgtgtgtctcctgaacaaggacctaggaaagaaaaacacgtt
gctcaggtggctggtgatgcttttcttttgagcccttgtagttcacctgtgttaaatgga
agagtaccaaccaatgaaattaccgtctgtactccagaggaccctttaggtggtggcaac
ctgactggacatcatttagaggtgccaactttgaaaaggggacagcttgactccgacagt
gatatggaagatgatatctttttaacacaacatgatcccagagatatggacttatgttca
caaatgcagaatggtgataatagactcattgaagaagtccattggaaaagagttcatgta
gaagagtctgtaaatcggcctcagtcagaatctttgagtagcacaagatgtaagtataag
gattgtgtggaaactgtgaaaagccagggtgagtactgctcaaaacactctgaagctaaa
gcagcagatgaagatgtctttcgtaaacctgccctgcctctttctgcctctaaacctttg
agaccttccactacaaagatttttagctcaagcagtacttcacgaattgctcatctttcc
aagtctttggaaagtgcctcggcatctccaggcctaaaaaataagtcaaatggaggacag
cctgtttccaaagtaccacagcctgcctctccgttgtctccaaagccaagggctgaagtg
aagagtttgtacaatattcctcattctccaactccgaataactccagcaggcaagctttc
aaactcccgtttggtgagtgcaggcctttttcttctccagccattttcttgtcatcacag
actatctctgacaccttcatcaaagaggtcttgaaatggaaatatgagatgtttgtgaag
tttgaccagtgtgggcccccaacaagtctttgtcaggccatctcaagatccgtgcctgtc
agatttcaagattgtgaagattacttcagtgttttcttccctctggtgttactgaatgcc
tttgaaacagtagcacaggaatggatcaactctccaaacagaggaaaattctatgagttg
cagttacgaaaatttcctggagaatataaaaaatactgggagtttgtggtttctcttgag
gaatgtgaactgtctaaacagctttatccaaaggagaatgacttggtgtttttggttcct
gagagactgaaaggagagaagagagagttggaggggaattccatccaagcttcccgtgaa
tatcactgtgcttatgttcagagattccgccgcacttcagtcatgcataatgggaaatat
gagtgttcccttctcatccagacgcaggataaattcccagtcaatgtaaatgaaaccgtg
agatgtgttgtaatcagttctctggtaactacacaaaggaagttgaaagcaatgtctttg
ttgaatagtcgaaaccaactggccagagctattctgaatccaaaccccatggacttctgt
acaagaaatctactaactacaacatctgagggaattaatgcctacttaagggatttcaac
gacgaccagaagaaagcgatagaaaccgcgtacgccatggtgaaacactccccggcggtg
gccaagatctgtctgattcatgggccacctggaacagggaaatcaaaaaccatcgttggc
ctcctgtaccgcctgctgaccgagaggagggggcagttggatgaaaactccaacgccaag
atcaagcagaaccgcgtgcttgtgtgtgcgccttccaacgcagccgtggatgagctgatg
aaaaaaatcatcctcgaattcaaagaaaggtgtaaaaacaagaagaatcctctgggaaac
tgtggagatatcaatttagtacgtctgggtccagaaaggtctattaataatgaggtccta
agattcagtttggacaaccaagttaaccacaaaatgaaaaaagacttaccttcttatgtt
caggagatgcatagaagaaaggaacagctagaccatcaactagatgaactttcccgccag
cgtgctttaagccgatatggaagaggaatccagaggcaagaattagatgaaaaaattgcc
caagtttcaaaagaaaggcaggaacttgcgtctaaaattaaagaggttcaagggcgccca
cagaaaacccagagcaacatcatcctagagtcccacatcatctgctgcaccctgagcacg
agcggcggtttactgctcgagtccgctttccgggggcaaggaggagtccccttcagttgt
gtcatcgttgacgaggccgggcaggcttgtgaagtggaaaccctcacccccctcatccac
cgctgcaacaagctggtcctcgtgggagacccgaagcagctcccccccacagtcatctcc
ttgacggcgcaggactacggctacgagcagtcgatgatggcccgcttctgcaagctgctg
gaggagaacgtggagcaccacgtgagcggcaggctgccggtgctccagctgaccgtgcag
tacaggatgcaccccgacatctgtctcttcccctccaattacatttacaacaagagcctg
aaaacccacaaagggactgagagcacgcggtgttcatcaagctggccgtttcagccttac
ctcgtgtttgacgtcggggacggctcagaacgacgggaaaatgactcatatgtaaacatt
caagaaatcaaactggtgatagaattgattaaacttctcagagacaaaggaagggatgtt
aatttccgaagcgttggcatcatcacccattacaaggctcagaagatgaagattctgaag
gagttggacaaagaatttgaaggaagagggctagcagaagtagatactgtggatgcattt
cagggtcgtcagaaagattgtattattgttacatgtgtcagagcaaacgccacacaaggc
tcaatcggattcctggcgagtttgcagaggttgaacgtcgccattacacgagccaagtac
agcctcttcatccttgggcatctgaggaccctgatggacaatcagcattggaaccacctg
attcaggacgcgcagaggcgtggcgccatcatcaagacctgcgacaagaactataagcag
gacgccatgaagatcctgaagctcaagtcggtggtgctgcagcggagcctgacctatcct
ccttctgcagcccctgagggctccagcccccagggtggctcgccgggcagagaccagaac
agaacattgctgaatgactccctgtaccacgcatccttggacgctaaggaggctgctgat
aatgttgctggaaaggaccttgaacggcctcctgttaaggaccagcttcgggacccacga
ctgctcaggagaatgggcagaagcgctgaagccccagggaactgcctaagggacccagag
ccccggggcccccagcattctgaagcagcgcccccctcagtagtgcccggcttccctgtg
agtccccagactctggaccgcgccttgaagctgtgcatggccacatggagcagccacaga
cctcatgtgtcgtgtgaacctcctgccgccagcattgactccacaaatgaaagtgaccag
caaggaggtcacagccaccagagagaggccagggctgtcagtgacagggaccaggagatg
cccagccctgggaaccatcacctcaagaggagctccagctgggacgatgggagagccgag
aaggaggaggacagcggctcgaagaagaggaagctctag
DBGET
integrated database retrieval system
