Myotis yumanensis (Yuma myotis): 139020925
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Entry
139020925 CDS
T10762
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum02010
ABC transporters
myum04148
Efferocytosis
myum04975
Fat digestion and absorption
myum04979
Cholesterol metabolism
myum05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139020925 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139020925 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
139020925 (ABCA1)
04979 Cholesterol metabolism
139020925 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
139020925 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
myum02000
]
139020925 (ABCA1)
Transporters [BR:
myum02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
139020925 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
139020925
NCBI-ProteinID:
XP_070287101
LinkDB
All DBs
Position
Unknown
AA seq
2263 aa
AA seq
DB search
MACWPQLRLLLWKNFTYRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQRDT
SMKDIHKVLRTLQKIENNSSSLTLRDFLVDNETFSGFLNHNLSLPRPTVDRMLGADVSLR
QVFLHGYQLRLTNLCSGSKLEEVIQLGDQEVSSLCSLPGEKLDAAERVFLSNLDILKPIL
TGLDSISPFLSQELTEGTKILLDSLGTLAQELFSMKSWSDMRQEVMFLTNVNSSISSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAGAVYDNSTSPYCNDLMK
SLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDIKGMWEELS
PKIWTFMESSPEMDLVRTLLNSRGNDHFWKQRLAGLDWTAEDIVAFLAKYPEDVQSENGS
VYTWREAFNETNSAVQTIGRFMECVNLNKVEPIATEVWLINKSMELLDERKFWAGIVFTG
IPPDSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSASLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDAFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWLGEESDEKSHPGSSQKGASEICMEEEPSHLKLGVS
IQNLMKVYRDGMKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMNTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKFVKADMEQMALDVG
LPPSKLKSKTNQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQMGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKVVPELPPAGQSGGRGGEVQRLVALTQDVAIISNLIRKHVAEARLVE
DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRAFGDKQSCLHPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQ
VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPEDMGTQELLNALTREPGFGTRCMEGNPIPDVPCLVGEEEWTT
APVPQTITDLFQNGNWTMENPSPTCQCSSEKIKKMLPVCPLGAGGLPPPQRKQNTEDILQ
NLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNSHGLPPSQDVNDAIRQI
KKHLNLAKDSSSNRFLTSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANL
QKGANPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGAVFFLITVLIQYRFFIRPRPVKAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELT
KVYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKTSTFKMLTGDSTVTRGDAFLNKNSIL
SNIHEVHQNMGYCPQFDAITELMTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVV
LTSHSMEECEALCTRMAIMVNGKFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDPLKDLSLHKNQTVVNVAVLTSFLKDEKVKESYV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgctggcctcagctgaggttgctgctgtggaagaacttcacttacagaagaaga
caaacatgtcagttgttgctggaagtggcctggcctctatttatcttcctgatcctgatc
tccgttcggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctccgcaggaacgcttccctgggtccaggggattatctgcaacgccaataacccg
tgtttccggtacccaactcctggtgaggctccgggcgttgtcggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgctcagcggcttctcttatacagccagagagacacc
agcatgaaggacatacacaaggttctgagaacattgcagaagatcgagaacaacagctca
agtttgacgctgcgggatttcctggtggacaatgaaaccttctctggattcctgaatcac
aacctctctctgccaaggcctactgtggacagaatgctgggggccgatgtcagccttcgc
caggtatttttgcacggctaccagttacgtttgaccaatctgtgcagtggatcaaagtta
gaagaggtgatccaacttggtgaccaagaagtttccagcctctgcagcctgccaggggag
aaactggatgctgcagagcgagtgtttctttccaacttggacattctgaagcccatcctg
acaggactagactctatatctcccttcctgagccaggagctgactgaaggcacaaaaata
ttgctggatagtctcgggactctggcccaagagctgttcagcatgaagagctggagtgac
atgcggcaggaggtgatgtttctgaccaacgtgaacagctccatctcctccacccagata
taccaggctgtctcccgcatcgtctgtggccaccccgagggtgggggcctgaagatcaag
tccctcaactggtatgaggacaacaactacaaagccctctttggaggcaatggcactgag
gaggatgctggcgccgtctatgacaattctacaagtccttattgcaatgatctgatgaag
agtttggagtccagtccgctctcccgcatcatatggaaagctctcaagcctctgcttgtt
gggaagatcctgtatacacctgacactccagccacgaggcaggtgatggctgaggtgaat
aagaccttccaggaactggctgtgtttcatgacataaaaggcatgtgggaagagcttagc
cccaagatctggaccttcatggagagcagcccagaaatggaccttgtccggacactcctg
aacagcaggggcaatgaccacttctggaaacagcgcttggccggcttagactggacagcc
gaagatatcgtggcgtttctggccaagtacccagaggacgtgcagtcagagaacggctcc
gtgtacacctggagagaggctttcaatgagaccaacagtgcggtccagaccataggtcgc
ttcatggagtgtgtcaacctgaacaaggtggaaccgatcgcaacagaggtttggctcatc
aacaagtccatggagctgctggatgagaggaagttctgggctggaatcgtgttcaccggg
attccccccgacagtgtcgagttgccccatcacgtcaagtacaagatccgcatggacatt
gacaatgtggagaggacgaataagatcaaagatgggtactgggaccctggtcctcgggcg
gacccctttgaggacatgcggtacgtctgggggggcttcgcctacctgcaggatgtggtg
gaacaggcgatcatccgggtgctgactggcaccgagaagaaaactggggtctacgtgcag
cagatgccctacccctgttacgtcgatgacatcttcctgcgggtgatgagccggtccatg
cctctcttcatgacactggcctggatctactcggtggctgtgatcatcaagggcatcgtg
tacgagaaggaggcgcggctgaaggagaccatgcgtatcatgggcctggataatggcatc
ctctggttcagctggttcatcagcagcctcatccctctgctcgtgagcgccagcctgctg
gtggtcatcctgaaattgggaaacctgctgccctacagcgaccccagcgtggtgtttgtc
tttctgtccgtgttcgccgtggtgaccatcctgcagtgcttcctcatcagcacgctcttc
tcccgggccaacctggcggcagcctgcgggggcatcatctacttcatgctgtacctgccc
tacgtcctgtgtgtggcctggcaggactacgtgggcttcacgctcaagatcttcgcgagc
ctgctctcccccgtggcttttgggtttggctgtgagtactttgcccttttcgaggagcag
ggcattggggtgcagtgggacaacctcttcgagagccccgtggaggaagatggtttcaac
ctcaccacctcggtctctatgatgctgtttgacgccttcctctatggggtgatgacgtgg
tacatcgaggctgtcttcccaggccagtatggaatccccaggccctggtattttccttgc
accaagtcctactggttgggtgaggaaagtgatgagaagagccatcctggttccagccag
aagggcgcatctgaaatctgcatggaggaagagcccagccacctgaagttgggtgtgtcc
attcagaacctgatgaaggtttaccgagacggcatgaaggtggctgttgatggcctgacc
ctgaatttctatgagggccagatcacttcctttctgggccacaacggagccgggaagacc
accaccatgtccatcctgactgggctgttccctcccacctcgggcaccgcctacatcctg
gggaaagacattcgctccgagatgaataccatccggcagaacctgggggtctgcccccag
cacaatgtgctctttgacatgctgactgtggaagagcacatctggttctacgcccgcctg
aaaggcctctcagagaagtttgtgaaagcggacatggagcagatggccctggatgttggt
ttgccacccagcaaactgaaaagcaaaaccaatcagctgtcaggtggaatgcagagaaag
ctgtctgtggccttggcctttgttgggggatccaaggttgttattctggatgaacccaca
gccggcgtggatccttactcccgccggggaatatgggagctcctgctgaaataccgacaa
ggccgcaccatcatcctctccacacaccacatggacgaagcggacatcctgggggacagg
atcgccatcatttcccacgggaagctgtgctgcgtgggctcctccctgttcctgaagaac
cagatgggaaccggctactacctgaccctggtcaagaaggacgtggagtcctccctcagc
tcctgcagaaacagcagcagcaccgtgtcgtacctgaaaaaggtggtgcctgagcttccc
ccagctgggcagagtggaggcagaggaggagaggtgcagaggctggtggcgctgactcaa
gatgtcgccatcatctccaacctcatccggaagcacgtggccgaggcccggctggtggaa
gacatcgggcatgagctgacctatgtgctgccctacgaagctgccaaagagggagccttt
gtggaactcttccacgagatcgatgaccggctctcggacttgggcatctccagctacggc
atctcagagacgaccctggaggaaatattcctcaaagtggctgaagagagtggagtggac
gccgagacctcagatggcactttgccggcaagacgcaaccggcgggccttcggggacaag
cagagctgccttcaccccttcactgaggacgatgctgtcgatcccaatgattccgacata
gacccagaatccagagaaacagacctgctcagcgggatggatggcaaaggctcctaccag
gtgaagggctggaaactcactcagcagcagttcgtggcccttttgtggaagaggctgctg
attgccaggcggagtcggaagggattctttgctcagattgtcctgccagctgtgtttgtc
tgcattgccctggtgttcagcttgatcgtgccaccctttggcaagtaccccagcctggaa
cttcagccctggatgtacaacgaacagtacacattcgtcagtaacgacgctcccgaggac
atgggcacccaggagctcctgaatgccctcacccgagagcccggctttgggacccgctgt
atggaggggaaccccatcccagacgtgccctgcttggtgggagaggaggagtggaccacg
gcccctgttccccagaccatcacggacctcttccagaatggtaactggacgatggagaac
ccctcacccacctgccagtgcagcagcgagaaaatcaagaagatgctgcccgtgtgtccc
ctgggggccggggggctgcctcctccacagagaaagcagaacacggaggacatccttcag
aacctgacggggagaaacatctcggattacctggtgaagacatacgtgcagatcatagcc
aaaagcttaaagaacaagatctgggtgaacgagtttaggtacggcggcttttccctgggt
gtcagcaattctcacgggcttcctccaagtcaagatgttaacgatgccatcaggcaaata
aagaaacacttgaatctggccaaggacagctcttcgaatcgatttctcaccagcttggga
aggttcatgacaggactggacacgaaaaacaacgtcaaggtgtggttcaataacaagggg
tggcatgccatcagctctttcttgaatgtcatcaacaacgccattctgcgggccaacctg
cagaagggggcgaaccccagccagtacgggatcactgctttcaaccaccccctgaatctc
accaagcagcagctctcggaagtggctctgatgaccacatcggtggatgtcctcgtgtcc
atctgtgttatcttcgccatgtccttcgtcccagccagctttgtcgtgttcctgatccag
gagcgggtcagcaaggcgaagcacctgcagttcatcagcggggtgaagcccgtcatctac
tggctctccaattttgtctgggacatgtgcaactatgtggtccctgccacgctggtcatc
atcatcttcatctgcttccagcagaagtcctacgtgtcctccaccaacctgcccgtgcta
gccctcctgctcctgctgtatgggtggtcgatcacaccgctcatgtatcctgcctccttc
gtgttcaagatccccagcaccgcctacgtggtcctcaccagcgtgaacctcttcattggg
atcaacggcagcgtggccaccttcgtgctggagctcttcaccgacaacaagctgaataac
atcaatgatatcctgaagtctgtgttcttgatcttcccgcacttctgcctgggacggggg
ctcattgacatggtgaaaaaccaggccatggctgatgccctggaaaggttcggggagaac
cgcttcgtctcgccactctcgtgggacttggtgggacgaaacctcttcgccatggccgtg
gagggggcggtgttcttcctcatcactgttctgatccagtacagattcttcatccggccc
agacctgtgaaggcaaagcttccccctctgaatgacgaggatgaagacgtcaggcgggaa
aggcagaggattctcgacgggggaggccagaatgacatcttggaaatcaaggagctgacc
aaggtgtatagaaggaagaggaagcctgctgtcgacaggatttgtgttggcattcctcct
ggcgagtgcttcgggctcctgggcgttaatggggctgggaagacgtcaactttcaagatg
ttaactggagacagcactgttaccagaggagacgctttccttaacaaaaatagtatctta
tcaaacatccatgaagtacatcaaaacatgggctactgcccacagttcgatgccatcacg
gagctgatgactgggagagagcacgtggagttctttgccctcttgagaggagtcccagag
aaggaagttggcaaggtcggtgagtgggcgattcggaagctgggcctggtgaagtacgga
gaaaagtacgccggcaactacagtggcggcaacaagcgcaagctctccacagccatggct
ctgatcggcgggcctcctgtggtgtttctggacgaaccgaccacaggcatggaccccaag
gcccggcgattcctgtggaactgtgccctgagcatcatcaaggaggggagatcggtagtg
ctcacctctcatagcatggaagaatgtgaagctctttgcacgaggatggcaatcatggtc
aatggcaagttcaggtgtctcggtagcgtccaacatctgaaaaataggtttggagatggg
tatacgatagttgtccgcatagcagggtccaacccggacctgaagcctgtccaggagttc
ttcggactggccttcccgggcagcgtcctgaaggagaagcaccggaacatgctgcagtac
cagctcccgtcctcgctgtcgtccctggccaggatcttcagcatcctctcccagagcaag
aagcgcctccacatagaagactactctgtctcacagacaacacttgaccaagtatttgta
aactttgccaaggaccaaagtgacgacgatcccttaaaggacctgtcgttacacaaaaac
cagacagtagtgaacgttgcagttctcacatctttcctgaaggatgagaaagtgaaagaa
agttatgtgtga
DBGET
integrated database retrieval system
