Myotis yumanensis (Yuma myotis): 139021125
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Entry
139021125 CDS
T10762
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139021125 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myum03400
]
139021125 (APTX)
Enzymes [BR:
myum01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
139021125 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
139021125 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
139021125 (APTX)
DNA repair and recombination proteins [BR:
myum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
139021125 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
139021125 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FtsK_SpoIIIE_N
Glycoamylase
Motif
Other DBs
NCBI-GeneID:
139021125
NCBI-ProteinID:
XP_070287476
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MMRVCWLVRQDNRHQRIKLPHLEAVVVGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ
VGVNPSSIDSVIIGKDQEVKLQPGQVLHIVNELYPYIVEFEEEAKSPGLETHRKRKRSGN
SDSLERDAAQEAEPSTGLVPGSDPSQRFVPPNKGTDESTKKESLGHWSQGLKISMQDPKM
QVYKDEQVVVIKDKYPKARHHWLVLPWASISSLKAVTREHLELLKHMHAVGEKVIADAAG
PSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQDVIKMIQEA
GRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLRKHWPK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgggtgtgctggttggtgagacaggacaacaggcaccagcgaatcaaacttcca
catttggaagcagtggtggttgggcgtggcccagagaccaagatcactgataagaaatgt
tctcgacagcaagtgcagttgaaagcagagtgtaacaaaggatatgtcaaggtaaagcag
gtaggggtcaatcccagcagcattgactcagtcataattgggaaggaccaagaggtgaag
ctgcagcctggccaggttctccacattgtgaatgaactttatccatatattgtagagttt
gaggaagaggcaaagagccctggcctggaaacacacaggaagagaaagaggtcaggcaac
agcgattccttagaaagggatgctgcccaggaagctgagcccagtacaggactggtacct
gggagtgaccctagccaacgctttgtgcccccaaacaaggggacagatgagtcaaccaaa
aaggaatcattgggccactggagtcaaggcttgaagatttctatgcaggatcccaaaatg
caggtttacaaagatgagcaggtggtggtgattaaggataaataccccaaggctcgtcac
cactggctggtcttaccatgggcctcaatttccagtctgaaggctgtgaccagggaacat
cttgagctcctcaaacatatgcatgctgtgggggaaaaggtgattgcagatgctgctggg
cccagcaaactccgcttccgattgggctaccacgccattcccagcatgagccatgtacac
cttcatgtgatcagccaggattttgattctccgtgccttaaaaacaaaaaacattggaat
tcttttaatacagaatacttcctagaatctcaagatgtgatcaagatgatacaagaggca
ggcagagtgactgtccgagatggtatgccagagctcttgaagctgcccctgcgttgtcat
gagtgccagcagctgctgccttccattcctcagctgaaagagcatctcaggaagcactgg
cccaagtga
DBGET
integrated database retrieval system