Myotis yumanensis (Yuma myotis): 139021169
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Entry
139021169 CDS
T10762
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
myum Myotis yumanensis (Yuma myotis)
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
myum04131
]
139021169 (VPS13A)
Membrane trafficking [BR:
myum04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139021169 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Mannitol_dh
RRM_fung
Motif
Other DBs
NCBI-GeneID:
139021169
NCBI-ProteinID:
XP_070287563
LinkDB
All DBs
Position
Unknown
AA seq
3171 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVVLKNLEIKENALSQLDVPFKIKVG
YIGNLNLKIPWKNLYTQPVVAVLENIYLLIVPSSIIKYDSLKEEKQLLEAKQQELKRIEE
AKQKVANQEKLLVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDITNQENPLSFGISLQ
NLSMQTTDQNWAPCLHDETEKLFRKLIRLDNLFAYWNVKSRMFYLTSYDDSLDSLRNGIV
DENIVPEGYDFVFRPISAKAKLQMNRRSDFDFSAPKIKLDVELHDIAIEFNKPQYFSLME
LLESVDMMTQNLPYRKFKPDVPVHGHAREWWAYAIHGILEVNVCPHLRMWSWKHISDHRQ
QMKQYKELYKKKLINKKPPVELLSCLEELEKTLDVFNITIVRQQAEVEVKKAGYRIYKEG
TKDSEENKGWFNWLWTWSEPKTKEQQPDVKPGSLEEILTPEEKTSLYEAIGYSETAVDPT
LPKSFEAMKLYMHLKSMSIVLREEQQKRELLNIVVEEFSTWVVQRPGAQAIKFETRIDSF
HVTGLPDNSTKPRLLSSLDNAASLFQITFETNPLDETVAQRCIIEAEPLEIIYDARTVNS
IVEFFRPPKEVNLAQLTSATLTKLEEFRDKTATGLLYIIETQKVLDLRINLKASYVIIPQ
DGIFSPTSNLLLLDLGHLKVTSKSRSQLPDMKQGGARLEEIMRRAYDSFDIHLTSIQLLY
SRVGDNWKEARKLNVSTQHVLVPLHFNVEFSKAMVFMDIRMPKFKIFGKLPLISLRISDK
KLQGILELIESIPKPTPATEVHAPVKPFQMQRSTSLGAPQISQKVIPLLEFAGVEYESEE
EFYDAPCSPVEEYFQSTGSIKSYQQSKIPELDCSKNIIQYKIRFEVPEVSIQFYHLVEDC
ELPVVEIVVLGLGTEVELRTFDLKANAFLKEFCLKCPEYLDVNEKPVYLITTLDNTMEDL
LTLEYVKAEKNVPNLRSSFNNVEQLIKVNFSSLDIHLHTEALLNTINYFNNFIPQLEEKS
ASVHVAETEDKGEVIKKIASRRYRHEDITLQILAELSCLQIFIQDQKHNIAEIKIEGLDS
EIIMRPSVTEVNAKLRNIIVLDSDITAVYKKAVYITGKEVFSFKILSYVNATADSAYTDM
SVVDIQVNLTVGCIEVVLVTKFLYSILAFIDNFQAVKEALAEATVQAAGMAATGVKELAQ
RSSRMALDVNIKAPVVVIPQSPVSENVLVADFGLITMTNTFHMITESQCNPPPIIDLITI
KLSEMRLYRSQYSNDAYQEVLDILLPLNLEVIVERNLAWEWFQEVPCFNINAQLKPMEFI
LSQEDITTIFKTLYGNIWYEGGGSVPPAGVKDQSSVTGGGTNTSHHSGGTTVVTAAVVEV
HSCAAQVKTTLNMSFKTDYLTMILYSPGPEQVSFTDVRDPSLTLAEFKLENIISTLKMYT
DDSIFSAFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYKKIRDGWMSDVVLQ
ETYICASVEFLLTVANVFLEAYTAGTAVETNVQAWAAKEEVPAQIQEKWEVNILIKNPEI
VFVADMTRNDAPALVITTQCEICCKGDLENNTMTAAIKDLQMRACPFLPDKRKDRITTVL
QPCDLFYQATQTGKDPQVIDISLKSLTLKVSPVIINTVITVTAALYTTKETIPQETASST
AHLWEKKDTKTLKMWFLEEPNEVKNIAPTTELVPKGEIIKMNIDSIFIVLEAGVGHRTVP
MLLAKSCFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEEFRPWNLG
IKMKKKAKKAIVESDTEEDYRVPEYKTVISFYSKDQLNITLSKCGLVMLNNLVKAFTEAA
TGSSTVFMRDLAPFMILNSLGLTISVSPSDSFSVLNVPVAKSYILKNEESLSMDYVRTKD
NDHFNAMTSLSSKLFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQIDTV
EGNKKVTVRSPVQIRNHFSIPLSVYEGNTLLGMASPGNEFNIPLASYRSLLFLKPEDEDY
QMCEAIDFEEIIKNEGSSLKRQCSPINPSKKPFIINIVPEKDNLTSLSVYSEDGWDLPYI
MHLWPPILLRNLLPYKIVYYIQGNEHRVFTLNEGSSAHICTVQLDKAILHLKLLDYLNQD
WKSEYHIKPNQQDISFINFTCVTEMEKNDLDIAIHVTYNPGQTVLAFHSPYWMVNKTGRM
LQYKADGIHRKHPPNYKMPVLFSFQPKHFFNNNKVQLMITDSELSDQFSIDTVGSHGAVK
CKGMKMEYQVGVIIDLSSFNITRIVTFTPFYMIENKSKYHISVAEEGSDKWLSLDLEQCI
PFWPEDASNKLLIQVERSRGPPQKIHLNKQENCILLRLDNELGGIIAEVNLAEHSTVITF
SDYHDGAATFLLINHTKNDIIEYKQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWSCGK
SHGEVTQKDDMMTPINLGTKTIYLVSFFEGLQRIILFTEDPKVFKVTYENEKAELAEQEI
VLALQDVGLSLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSIKHTEKLEKEFKEY
IESSPSEDKVIELDTNIPVRFTPSGNNMKILQPHIIAIRRNYLPALNVEYSTSAHQSSFR
IQIYRIQIQNQIHGAVFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYF
KVLIQEMDLRLDLGFVYALAELMTEAEVTEKTEVELFHKDIEVFQEEYKTVSLVDSSQVS
LYEYFHISPIKLHLSVSLSSGKEAAKDSEQHEGFIAISSLNLLLKSIGATLTDVQDVVFK
LAFFELNYQFHTTSELQSEVVRHYSKQAIRQMYVLILGLEVLGNPFGLIREFSEGVEAFF
YEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAITMDEDYQQK
RREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVG
AVARPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQ
VIENGRFAKYRYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIV
HGRRLRIEAKERVKSVFHAKEFGKIINFKTAEDARWILTKLEEAREPSPTL
NT seq
9516 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggatgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtggtcttgaagaac
cttgaaattaaagaaaatgccctgagtcaactggatgtaccatttaaaattaaagttggt
tatataggtaaccttaatcttaaaattccatggaaaaacctttatactcaaccagttgta
gctgtactggaaaacatttatttactcatagtgccttcttctataataaaatatgattct
ttaaaagaagaaaagcaacttttggaagcaaagcagcaggaactaaaaagaatagaagaa
gccaaacaaaaagtagctaatcaagaaaaactcctggtggagaaacaagacacttttaca
gaaaaattaattactcagatcataaagaatcttcaagtgaaaatttccaacatccatatt
cgttatgaagatgatatcacaaatcaagaaaacccactgtcatttggtatttctcttcaa
aatctcagcatgcagacaactgatcaaaactgggctccatgtttacatgatgaaactgag
aaactatttcgtaagttaatccgattggataacctttttgcttattggaatgtgaagtct
cggatgttttatcttactagttatgatgattcattggacagcttgaggaatggcattgtt
gatgaaaatattgttccagaaggttatgattttgtatttcgccccatatctgctaaagcc
aaacttcagatgaatcgccgatctgattttgacttttctgcccccaagataaaattggat
gttgaattacatgacatagcgattgaatttaataaaccacagtatttcagtcttatggag
cttcttgaatcagttgatatgatgacgcaaaatctgccatataggaaattcaaacctgat
gtacctgttcacggccatgccagagaatggtgggcttatgctatacatggtattcttgaa
gtaaatgtttgcccccacttacggatgtggtcatggaaacatattagcgatcatcggcaa
caaatgaagcaatataaagaactctataagaaaaaactaataaataagaagccacctgtt
gaacttctcagctgtttggaggagttggagaagactctggatgtatttaatataactata
gtgagacaacaggcagaagttgaggtaaagaaagctggatacaggatatacaaagaagga
acaaaagattcagaggaaaataaaggatggtttaactggttgtggacttggtcagaacca
aaaactaaagaacagcagcccgatgttaaacctggaagtcttgaagaaatcttgacacct
gaagaaaaaacttcactctatgaagcaattggctatagtgaaacagcagttgacccaacc
ttgccaaaatcatttgaagccatgaagttgtacatgcacttgaaaagtatgtctattgtt
ctaagagaagaacaacaaaaacgtgagctgttaaatattgtagtagaagaatttagcact
tgggttgtacaaagaccaggagcacaagcaataaaatttgagaccagaatagattccttt
catgttactggcctaccagataattcaacaaagccccgcctcctgtcctcattggataat
gctgcatcacttttccagattacatttgagacaaatccattagatgaaactgttgctcaa
aggtgtatcatagaagctgaacctttagaaataatatatgatgcaagaacagtgaatagt
atagtggaattcttcagacctccgaaagaggtaaatctagcacagctcacttcagcgact
ttgacaaaacttgaagaatttcgtgataagacagcaacaggtctactgtatattattgaa
acacagaaagttcttgatctcagaattaatttgaaagcttcatatgttattatcccacaa
gatggaattttcagccctacgtcaaatctgcttcttttggatcttggtcatttaaaggtg
acaagcaaaagtcgttcacaattaccagatatgaaacaaggtggggccagacttgaagag
ataatgcgtagagcttatgattcctttgatattcaccttacaagcattcagctgctttac
agcagagttggtgataattggaaagaagcacgaaaactcaatgtgtctacacagcatgtt
ttggtacctttgcacttcaatgtggaattctctaaggccatggttttcatggatataagg
atgcctaaattcaagatttttggaaagttaccactgatttctttgcgaatctcagataaa
aaactgcaaggaattttggaattgattgaaagcattccaaaacccacacctgcaactgaa
gtacatgcccctgtcaagccatttcagatgcaaaggtccacttctttgggagcaccacag
atttcacagaaagtgattcctctcttggaatttgcaggtgttgaatatgagtcagaggag
gaattttatgatgcaccatgtagtcccgtggaagaatattttcagtcaacaggtagcatt
aaaagttatcaacaaagtaagattccagagctggattgttcaaaaaatataattcagtat
aaaataagatttgaagtgccagaggtatcgattcaattttatcaccttgttgaagattgt
gaactacctgtggtagaaattgttgtcttaggattgggcacggaagtagaacttcgaaca
tttgatttgaaagccaatgcctttttgaaagaattctgcttaaaatgcccagaatacttg
gatgtaaacgaaaagccagtttatttgattacaacactagataacacaatggaggatctg
ttaacactggagtatgtgaaggctgaaaagaatgtacccaacttgagaagttcctttaat
aatgttgaacaactgattaaggtgaatttttcctctttggatattcatttgcatacggaa
gcacttctgaatacaataaactattttaataatttcattccacaattggaggaaaagtca
gcctcggtgcatgttgcggagacagaagacaaaggagaggtcattaaaaaaatagcttca
agacgatacaggcatgaagatattaccttgcagatcttagcagaattatcatgtttacag
atctttattcaagatcagaaacataacattgctgaaattaagattgaagggcttgattct
gagataattatgaggccttcagtaactgaagtaaatgcaaagctaagaaatataattgtt
ttggattctgatataacagctgtatataaaaaggctgtttatatcactggaaaagaagtt
ttcagcttcaaaatcctttcttatgtgaatgcaactgctgattccgcatacacagatatg
agtgtggttgacattcaagttaatttaactgttggttgcattgaagtagttttagtcaca
aaatttttatattctatattggctttcatagataattttcaagcagttaaagaagccttg
gctgaggcaactgtccaggcagcaggaatggctgctactggtgtaaaagaactggcacaa
aggagttctagaatggcattagatgttaacatcaaagccccagttgtggtcatcccacag
tctccagtttctgaaaatgtccttgttgctgattttggactaattacgatgaccaataca
tttcacatgataacagagagccagtgcaatcccccacccattattgatttgattacaata
aagctgagtgaaatgcgactatacaggtctcaatatagtaatgatgcataccaggaagta
ctggatatactactgccattaaatcttgaggtgattgttgagcgaaatttagcctgggag
tggttccaggaagttccttgttttaatataaatgctcaactaaagcctatggagttcatt
cttagtcaagaagatataacaactatctttaaaacattatatggtaatatatggtatgaa
ggaggtggcagtgtcccaccagcaggagtgaaagatcagagtagtgttactggtggaggc
actaacacttcacatcattcaggaggaacaactgtagtgacagctgctgtggtagaagta
cattcatgtgccgctcaagttaagacaacactaaatatgagtttcaaaactgattatctc
accatgatactgtatagtccaggtcctgaacaggtttcctttacagatgttcgtgatcct
tctctgacacttgctgaatttaaattggagaatataataagtactttaaaaatgtataca
gatgactcaatattttctgccttctcattaaaaaattgtattttagatgataaaaggcct
catgtcaagaaggcaactcctagaatgataggactgacagttggatttgacaaaaaagat
atgatggatgtaaagtataagaaaatcagagatggttggatgtctgatgtagtccttcaa
gaaacatatatttgtgcaagtgtggaatttcttctgacagttgcaaatgtatttcttgaa
gcctacaccgcaggcactgctgtagaaaccaatgttcaagcatgggctgctaaggaagaa
gtacctgcacagatacaagaaaagtgggaagtgaatattcttattaaaaatcctgaaatt
gtgtttgtggctgatatgacaagaaatgatgctcctgccttagtcattacaacacaatgt
gaaatttgttgcaagggtgaccttgaaaacaatacaatgactgctgctattaaagatctc
caaatgagagcatgcccatttcttcctgacaagagaaaagacagaatcactactgttttg
cagccctgtgacttgttctatcaagctactcagacaggcaaagatccacaagtgattgat
atatcactaaaatcgctgacactaaaggtttcaccagttatcataaatactgtgattacc
gtaactgcagcactttacacaactaaggaaaccatcccacaagaaactgcttcttctaca
gcacatttatgggaaaagaaggatacaaagactttaaaaatgtggtttcttgaagaacca
aatgaagtgaaaaacatagctcccacaactgaattggtacccaaaggagagataataaaa
atgaacattgattctatttttatagttcttgaggctggggttggtcatagaacagtgcct
atgcttttggcaaaatcatgtttttcaggggaaggcaaaaactggagttccctcataaat
ctccactgtcagcttgagctagaagtgcattattacaatgaaatgtttggtgtatgggaa
cctttgcttgaacctttagaaattgaccagactgaggaatttagaccatggaatcttgga
atcaagatgaaaaagaaagcaaaaaaggctattgttgagtcagatactgaagaagattac
agagtgccagaatataaaactgtcatcagtttctattcaaaagaccaactaaacattaca
ttatccaaatgtggtcttgtaatgttaaataatttagtcaaggcatttacagaagctgcc
actggatcttcaactgtcttcatgagggatctagcgccatttatgattttaaattctctt
ggacttaccatctctgtttcaccaagtgattcttttagtgtgctcaacgttccagtggca
aagtcatatatattgaaaaatgaggaaagtttaagtatggattatgtccgaacaaaagac
aatgatcatttcaatgcaatgaccagcctaagcagcaaacttttcttcattcttcttaca
cctgctaaccactctactgctgataaaattcccttaacaaaagtgggacgacgactgtac
actgtaaggcacagagaatctggagttgaaagatctattgtttgtcaaattgacacagtg
gaaggaaataagaaagtaacagttcgctctccagtgcagattagaaatcatttctcaatc
ccactttctgtttatgaagggaatactttattgggaatggcttcacctggaaatgaattt
aacataccattagcatcttaccgatcactcctttttctaaagccagaagatgaggactat
caaatgtgtgaagcaattgactttgaagaaattataaaaaatgaaggctcttctctaaag
aggcaatgtagtcctataaacccgtctaagaaaccatttattattaatattgtcccagaa
aaagataatttgacatctctgtcagtatattcagaagatggttgggacttaccatacata
atgcatttgtggccacctatcctactccgaaatcttcttccttacaaaattgtttattat
atacaggggaatgaacatagagtttttactctaaatgaaggctcttctgcccatatttgt
accgtacaattggataaagcaatactacatttaaaattacttgactatcttaatcaagat
tggaaaagtgaatatcatataaaacctaatcaacaagatattagtttcatcaattttacc
tgtgttacagaaatggaaaagaatgatttagatattgctatccatgtgacttataatcct
ggccagacagttctggcatttcatagcccttactggatggtcaataaaactggtcgaatg
ttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaatgccagtt
ctcttttcttttcagccaaagcacttttttaataacaataaggttcagctaatgataact
gatagtgagttgtcagatcagttttcaattgatactgttggtagtcatggagctgttaaa
tgtaaaggcatgaaaatggagtatcaagttggtgtcattatagacctcagcagttttaac
attaccagaattgtgacatttacccctttttatatgattgaaaacaaaagcaagtatcat
atatcagtggctgaagaggggagtgataaatggctctctctcgatttggagcagtgtatt
cccttttggcctgaggatgcttcaaataaacttcttattcaagttgaaagaagtagaggc
cctccccaaaagatacatttaaacaagcaagaaaattgtattttattgcgtctggataat
gagcttggcggtattatagcagaagttaatttggctgagcattctacagttattacattt
tcagattatcatgatggagcagctacattcctattaataaatcacactaagaatgacatt
atagaatataagcaaagttctctcagtgaaatagaagactctctccctcctggaaaagca
gtattttatacatgggccgatccagtgggctctagaaagctgaagtggagttgtgggaaa
agccacggtgaagtaacacaaaaagatgatatgatgacacctataaatttggggacaaag
actatttatttagtttcattctttgaaggcttacaacgcattattttattcactgaagat
ccaaaggtatttaaagtgacatatgaaaatgagaaagcagaattagcagagcaagaaatt
gtgttggcattacaagatgttggactttctctcgtcaacaattacacaaagcaagaagta
gcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaaggca
agatggaagccaatgagtataaagcacactgagaagttagagaaagaatttaaggaatat
attgaatcttcaccttcagaagataaggttattgagttggacactaatattccggttcgc
tttacacctagtggcaataacatgaaaattctgcaaccacatataatagctatacgaaga
aattatctgccagcattaaacgtggaatatagcacatctgcacatcaatcatcatttaga
attcaaatttatagaatacagatccaaaaccagatacatggtgctgtatttccatttgta
ttttatcctattaagcctcccaagtcagtcaccatggattcagcacccaagccctttaca
gatgtcagtattgtcatgagatctgcagggcattcccagatatcacgtattaaatacttc
aaagtgttgatccaagaaatggatctcaggttagatcttgggtttgtctatgcattagca
gaacttatgacagaagctgaagtaactgaaaaaacagaggttgaactttttcataaagat
atagaagttttccaagaagaatataaaacagtttcattagtagattcatcacaagtcagt
ctctatgagtattttcatatatctcctatcaagttgcatttaagtgtttcactgagttcg
ggtaaagaagcagctaaagactcagaacagcatgaaggattcattgcaattagttcttta
aatctcttgctgaagagtattggcgccactcttacagatgtacaagatgtagtttttaag
cttgcattttttgaactcaactatcagtttcatacaacatctgaactgcagtctgaagta
gtaagacactattcaaaacaggccattagacaaatgtatgtactcattcttggacttgaa
gttttgggaaatccctttggcttgattagagaattttctgaaggtgtagaagcatttttc
tatgaaccttaccagggagccatccagggtcctgaggagtttgtggaaggaatggcacta
ggattgaaggcattagttgggggagctgttggtggattagctggtgctgcctccaaaatc
accagtgctatggctaaaggggtagcagctataactatggatgaagactaccaacagaag
aggagagaagccatgaacaagcaaccggctggtcttagagaaggcatcactcgaggagga
aaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaagccaatcaaa
ggagctcaaaaagaaggagcagctggtttctttaaaggtgttgggaaaggtttagttgga
gcagtggcaagaccaactggaggcatcatagacatggctagcagtacatttcagggaata
aaaagggctacagagacttctgatgaagtggagagtctgcggcctcctcggttctttaat
gaagatggagttatcagaccttacaggttgagggatggtactggaaatcagatgttgcag
gtaatagaaaatggaagatttgcaaaatacagatattttacccatgtcatgatcaataaa
acagatatgttaatgataaccaaaagtggggtattgtttgtaacaaaaggaacatttgga
cagcttacatgtgagtggcagtacagttttgatgagtttaccaaagagccattcattgtt
catggaagaagattgcgaattgaagcaaaggaacgggtgaagtctgtattccatgccaaa
gagtttggaaaaataattaacttcaagaccgcagaagatgctaggtggatcctcacaaag
ctagaagaagcaagagagccttccccgaccctctga
DBGET
integrated database retrieval system
