Myotis yumanensis (Yuma myotis): 139021762
Help
Entry
139021762 CDS
T10762
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139021762 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myum03021
]
139021762 (TAF5)
03036 Chromosome and associated proteins [BR:
myum03036
]
139021762 (TAF5)
Transcription machinery [BR:
myum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139021762 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
139021762 (TAF5)
Chromosome and associated proteins [BR:
myum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
139021762 (TAF5)
STAGA complex
139021762 (TAF5)
TFTC complex
139021762 (TAF5)
SAGA complex
139021762 (TAF5)
SLIK complex
139021762 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_NTD2
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
CDK5RAP3
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Late_protein_L2
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_DCAF4
Beta-prop_Nup120_160
LisH_PAC1
ABM-like
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
139021762
NCBI-ProteinID:
XP_070288460
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MAALAEEQTEVAVKLEAEGPPTLLPPQAGDGAGEGSGGTTNNGPNGGGGNAAAASSAGGD
GGTPKPSVAVSAVAPAGAAPVPAAAPEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAAAGSGAPGEADGAGAEAASALLSRVATSAPGPAAPDPPGTGASGAAAVSGSATC
PAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARQNCAALGCLEWELCKDLHWTQGTNSFLDIFSQWEIPGYRSNRWQSTPLGY
WTWFDGWRIKRPHRYSLFT
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagaggctgagggaccg
ccgacgctgctacctcctcaggcgggggacggcgctggggagggtagcggcggcaccacc
aataacggtcccaatggtggcggcgggaacgctgcggcggcgtcgtcagccggcggggat
ggtgggacccccaaaccttcggtggctgtctctgccgttgccccggcgggggcggccccg
gtgcccgccgccgctccggaggccggcgctccccacgaccgacagactctgctggccgtg
ctgcagtttctgcggcagagcaaccttcgcgaggccgaagaggcgctgcgccgcgaggcc
cggctgctggaggaggcagcggcgggctccggcgcgccgggagaggcggacggcgcgggc
gccgaggcggccagcgcgcttctcagccgggtcgccacctcggctcccggccctgcagcc
cccgaccctccgggcaccggcgcttcgggcgctgccgccgtctcgggctcagcgacctgt
cctgcggctccggggaaagttggaagtgtagctgtggaagaccagccagatgtcagtgct
gtgctgtcagcttacaaccagcaaggagaccccacaatgtatgaagaatactacagtgga
ctgaaacacttcattgaatgttccttggactgccatcgggcagagctatcccaactcttt
tatcctctgtttgtacacatgtacttggaactagtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaagatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagagcca
gaaattgaagtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaaacct
aaaaagaagaagcctaaaaaagatagtattggatccaaaagcaaaaaacaggatcccaat
gctccacctcaaaacagaatccctcttcctgagttgaaagattcagataagttggataag
ataatgaatatgaaagaaaccaccaaacgcgtgcgccttgggccagattgtttaccttcc
atttgtttctatacattcctcaatgcttaccagggccttactgcagtggatgtcactgat
gattctagtttgattgctggaggttttgcagattcaactgtcagagtgtggtctgtgact
cccaaaaagcttcgtagtgtcaaacaagcagcagatcttagcctcatagacaaagaatca
gatgatgtcttagaaagaatcatggatgagaaaacagcaagcgaattaaagattttgtat
ggtcacagtgggcctgtctatggagccagcttcagtccagataggaactatctgctttcc
tcttcagaggatggaactgttagattgtggagtcttcaaacatttacttgcttggtggga
tataaaggacacaactatccagtttgggacacacagttttctccatatggatattatttt
gtatctgggggccatgaccgagtagctcgacagaactgtgcggctctgggatgtcttgaa
tgggaactgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttc
tcccaatgggagattcctggctacaggagcaacagatggcagagtactcctttgggatat
tggacatggtttgatggttggagaattaaaaggccacaccgatacagtctgttcacttag
DBGET
integrated database retrieval system
