Mycobacterium sp. VKM Ac-1817D: G155_04645
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Entry
G155_04645 CDS
T03634
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
myv
Mycobacterium sp. VKM Ac-1817D
Pathway
myv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G155_04645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myv03019
]
G155_04645
03400 DNA repair and recombination proteins [BR:
myv03400
]
G155_04645
Enzymes [BR:
myv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G155_04645
Messenger RNA biogenesis [BR:
myv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G155_04645
DNA repair and recombination proteins [BR:
myv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G155_04645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
AIY49192
LinkDB
All DBs
Position
979814..981916
Genome browser
AA seq
700 aa
AA seq
DB search
MTTREQAQSILEQLAGPAAVLRDDQWAAIEALVVERRRALVVQRTGWGKSAVYFISAKLL
RAAGRGPTVIVSPLLALMRNQVSAAERAGVRAATINSGNVTEWDAIHRQVNDGELDVLLV
SPERLNNPDFRDNVLPALAADAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIAELGSQIPV
LATTATANDRVVSDVAAQLGVGGSDTLVLRGGLDRESLRLSVVQVGTPAQRAAWIAAHLD
SLPGSGIIYTLTVAQAHDVAALLAERGHKVAAYTGSTDAGEREQLEADLLDNRVKALVAT
SALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATDSAEVILLPGTEDQDVWRYFAS
VAFPSESMVRHVIGALETDRAQSTQALEPRVDLNRSRLEMVLKVLDVDGAVRRVKGGWIG
TGVPWSYDEARYRALDEARRREQQAMLDYQATDGCRMAFLRSQLDDPELVPNTRCGRCDN
CNGRRYEGTVAQDVLIDTTQRLSRPGVLVAPRKQWPSGLAALGVPLSGRITDGAAPGRAI
GRLTDLGWGARLRRLLAEPDGDVPDDVVAAAIEVLKAWDWDCRPVAVMGLDSRTHPKLIS
STVQRLAQIGRLTDLGVLRYTPQSRPVTAANSAYRVAALDGAWERPQWGVADEGTGGHWQ
GPVLLIDDMTDTGWTLTMAARLLRDAGAPGVLPFVFATVS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgactacccgcgagcaggcccaatcgatcctcgaacaactggccgggcccgcggcggtg
ctgcgcgacgatcagtgggccgccatcgaggcccttgtggtcgagcgacggcgcgccctg
gtcgtacagcgcacggggtggggaaaatcagcggtctacttcatctcggccaaactgctg
cgggcggcgggccgggggccgacggtcatcgtgtccccattgctggcacttatgcgtaac
caggtgtcggccgccgagcgagccggggtccgggccgccacgatcaactccggcaatgtg
accgaatgggacgcgatccaccggcaggtcaacgatggcgaactcgacgtgttgctggtc
agtcccgagcggctcaacaatccggacttccgcgacaacgttctgccggccctggccgct
gatgcggggctggtggtggtcgacgaggcccactgcgtctccgactggggccatgacttc
cggccggactatcgccgcattcgtaccctgatcgccgaattgggttcgcagataccagtt
ctcgcgacgacggcgactgccaacgatcgcgtcgtcagcgatgtcgccgcacagctcggg
gtgggcggatcggataccttggtgctgcgtggtgggctggaccgagagtcgttgcggctg
tcggtggtgcaggtgggcacgccggcccagcgggccgcctggattgccgcgcacctggat
tctctgcccggttcgggcatcatctacaccctgacggtggcacaggcgcatgatgtggcg
gccctgctggccgagcgtggccacaaggtggccgcctataccggatccaccgacgcaggc
gaacgcgaacaactggaagccgacctgctcgacaacagggtcaaggccctggtggccaca
tcggctctgggcatgggattcgacaaacccgacctcggtttcgtcgtgcacctgggtgcg
ccgtcatccccgatcgcgtattaccagcaggtcggccgcgcgggccgcgccaccgacagt
gccgaggtgatcttgctccccggcaccgaagatcaggacgtctggcggtacttcgcgtca
gtggcgtttccgtccgaatccatggtgcgccatgtcatcggcgctttggaaaccgaccgg
gctcagtccactcaggccctggaaccccgggtggatctcaaccggtcccgcctggagatg
gtgctgaaggtgctcgacgtcgacggtgcggtgcgccgggtgaagggcggctggatcggt
accggagtgccgtggagttacgacgaggcgcggtatcgagcactggacgaggcgcggcgc
cgggagcagcaggcgatgctcgactatcaggccaccgacggctgccgcatggccttcctg
aggagccagctcgatgatcccgagctggttccgaacacgcgttgcggacgatgcgacaac
tgcaacgggaggcgctacgagggcacggtcgcccaggacgttctcatcgataccacgcag
cggctgtcgcgcccgggcgtgctcgtggccccacgcaagcagtggccgtcgggactggcg
gctctgggtgtgccgctgtccggccggatcaccgacggtgccgcaccggggcgcgcgatc
ggaaggctcaccgatctgggctggggagcacggctgcggaggctgctggccgagcctgac
ggtgacgttcccgatgacgtggtcgccgctgccatcgaggttctcaaggcctgggactgg
gactgccggccggtggcggtgatgggcctggattcccggacacacccgaagctgatctcc
tcgaccgtgcagcgcctcgcgcagatcggccggctgaccgatctcggcgtcctgcgctac
acgccgcagagccggcccgtcacggcggcgaattctgcttatcgcgtggcggccctggac
ggtgcctgggaacgtccgcaatggggtgtcgcggacgagggaacaggcggacactggcag
ggtccggtgcttctgatcgacgacatgacagacaccggctggacgctgaccatggccgcg
cggctactgcgcgacgccggagcgcccggagtgctgccgttcgtttttgcgaccgtcagc
tga
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