Mycobacterium sp. VKM Ac-1817D: G155_06770
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Entry
G155_06770 CDS
T03634
Name
(GenBank) DNA lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
myv
Mycobacterium sp. VKM Ac-1817D
Pathway
myv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
myv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G155_06770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myv03400
]
G155_06770
Enzymes [BR:
myv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
G155_06770
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G155_06770
DNA repair and recombination proteins [BR:
myv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G155_06770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
DUF7577
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AIY45315
LinkDB
All DBs
Position
1446156..1447013
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AA seq
285 aa
AA seq
DB search
MPELPEVEALADHLRRHATGRKVTRIDVSALSVLKTFDPPTTALHGQTVTGANRWGKYLG
LEVGPWHLITHLSRAGWLRWSDKLSPTPLKPSGKGPIALRVHLDEGVGFDLTEAGTQKRL
AVWVVADPMAVPQIASLGPDALSLDSAGLAGVLAGNSGRIKTVITDQKVIAGIGNAYSDE
ILHVAKLSPFATAGKLTDAQLGALHDAMISVLTDAVTRSVGQQAATLKGEKRSGLRVHAR
TGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaagtcgaggcgctggccgatcacctccgccgacatgccacgggc
cggaaggtcacccggatcgacgtgtccgcgttgtcggtgctcaagacgttcgatccgccg
acgacggcgctgcacggccagaccgtgaccggcgcgaaccgctggggcaagtacctcggc
ctcgaggtcggcccctggcacctcatcacgcatctgtcacgggcgggttggttgcggtgg
tcggacaagctgtcgccgacgccgctcaagccgtcgggaaagggcccgatcgccctgcgc
gtgcaccttgacgagggagtcggcttcgacctcaccgaggcgggaacgcagaagcggttg
gcggtgtgggtggtcgccgatccgatggccgtaccgcagatcgcctcactcgggccggac
gcgctgtcgctggactcggccggactggccggcgtgctggcgggcaattccgggcggatc
aagacggtgatcaccgatcagaaggtcatcgccgggatcggcaacgcctacagcgacgag
atcctgcacgtcgccaagctgtctccgttcgccactgccggcaagctgaccgatgctcaa
ctcggcgcgctgcacgacgcgatgatctccgtgctgaccgatgcggtcacgcgttcggtg
gggcagcaggccgcgaccctcaagggggagaagcggtccggcctgcgtgtgcatgcccgc
accggactaccgtgcccggtctgcggggacacggtgcgggaggtgtccttcgccgacaag
tcgttccagtactgcccgacgtgccagaccggcggcaaggtgctggccgaccggcggatg
tcccgcttgctcaagtag
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