Mycobacterium sp. VKM Ac-1817D: G155_11630
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Entry
G155_11630 CDS
T03634
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
myv
Mycobacterium sp. VKM Ac-1817D
Pathway
myv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
myv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G155_11630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
myv03400
]
G155_11630
Enzymes [BR:
myv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
G155_11630
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G155_11630
DNA repair and recombination proteins [BR:
myv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G155_11630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
TackOD1
Motif
Other DBs
NCBI-ProteinID:
AIY46114
LinkDB
All DBs
Position
2413776..2414642
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEVVRRGLQEHVAGKSITAVRVHHPRAVRRHDAGPADLTARLLGARITGTGRRG
KYLWLTLAEDDGQAETEALVVHLGMSGQMLLGPLRDDRHLRIAALLDDGTALSFVDQRTF
GGWQLAELVTVDGTAVPQPVAHVARDPLDPRFDRDHVVNVLRHKHSEIKRQLLDQTVVSG
IGNIYADEALWRTKVNGASTAALLTRRKLAELLDAAAEVMTDALGQGGTSFDSLYVNVNG
ESGYFERSLDAYGREGEPCRRCGAIMRRDKFMNRSSFYCPKCQPRPRG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaggtagaggtagtccgccgcgggttgcaggaacacgttgcgggc
aaatcgattacagcggtacgcgtgcaccatccgcgtgccgtgcgtcgccatgacgccggc
ccggccgatctgactgcccgtctgctgggggcccgcatcaccggcaccggacgccgcggc
aagtacctgtggttgacgttggccgaagacgacggccaagccgagaccgaagcgttggtg
gtgcatctggggatgagcggtcagatgctgttgggcccgcttcgcgatgaccggcatctg
aggatcgcagcactgctagacgacggcacggccctgagctttgtcgaccagcgcacgttc
ggagggtggcagctggccgaattggtgacggtggacggcaccgccgtgccgcaaccggtc
gcgcacgtcgcccgcgatccgctggatccccgtttcgatcgtgaccacgtggtgaacgtg
ttgcggcacaagcactctgagatcaagcgccaactgctcgaccagactgtggtgtcgggt
atcggcaacatctacgccgacgaggcgctgtggcggaccaaggtcaacggcgccagtacc
gctgcgctgctgacccgccgcaagctcgctgagctactcgatgccgccgccgaggtgatg
accgacgcgctgggccagggcggcacgtcgttcgactcgctgtatgtgaacgtcaacggt
gaatccggttatttcgaacggtctttggatgcctacggccgtgaaggggagccgtgccga
cggtgcggcgcgatcatgcgtcgcgacaagttcatgaaccggtcgtcgttctattgtccg
aagtgtcagccccgtccccggggctga
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