Mycobacterium sp. VKM Ac-1817D: G155_12410
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Entry
G155_12410 CDS
T03634
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
myv
Mycobacterium sp. VKM Ac-1817D
Brite
KEGG Orthology (KO) [BR:
myv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
myv03016
]
G155_12410 (truB)
Enzymes [BR:
myv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G155_12410 (truB)
Transfer RNA biogenesis [BR:
myv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G155_12410 (truB)
Prokaryotic type
G155_12410 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF5785
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIY46248
LinkDB
All DBs
Position
2579413..2580300
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AA seq
295 aa
AA seq
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MSVPEPGLVIVDKPAGMTSHDVVGRCRRLFGTRKVGHAGTLDPMATGVLVVGIERATKIL
GLLTATDKSYSATIRLGQTTTTEDAEGEVLQSVSAVHVTDDQIEAAVAGLRGDIEQVPSA
VSAIKVDGQRAYKLAREGQKVELAARPVRIDKFEVVAVRRLGDFVDVDVDVDCSSGTYVR
ALARDVGVTLGVGGHLTALRRTRVGRYGLDEARTLEDLADHARLSYSLDEACLVGFPRRD
LTDAETEDTRHGRALAPAGIDGVYAATAPDGRVIALLQDGSSRTKNVVVLRPATL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgttccagaaccgggcttggtgatagtcgacaagcctgccggcatgaccagccac
gacgtggtggggcgctgtcgacggttgttcggcacccgcaaggtcggccacgccggcacc
ctcgatccgatggccaccggggtgctcgtcgtcggcatcgaacgggccaccaagatcctc
ggcctgctgaccgccaccgacaagtcgtactccgccaccatccggctcggtcagacgacg
accaccgaggatgccgaaggtgaagtgctgcagtcggtctcggctgtgcatgtgacggac
gaccagatcgaggccgcggtcgccggactgcgtggcgacatcgagcaggtgccgtcggcg
gtcagcgccatcaaggtagacggccagcgcgcatacaagctggcccgtgaagggcagaag
gtcgagttggcggcgcgccccgtgcgcatcgacaagttcgaggtggtcgcggtccgtcgg
ctgggcgacttcgtggacgtggacgtggatgtggactgctcgtcgggtacctatgtccgg
gcgttggctcgtgacgtgggtgtcaccctcggtgtgggcggacacctgacggctctgcgt
cgcaccagggttggccgatacgggctggacgaggcccgcaccctggaggaccttgccgac
cacgctcggctgagctactcgctcgatgaggcctgcctggtcgggtttccgcgccgcgac
ctgaccgacgcggaaaccgaggacacccgacacggccgggcactggccccggccggtatc
gacggtgtctatgccgccaccgcaccggacgggcgggtcatcgcactgctgcaggacggt
tcgtcgcgcaccaagaacgtcgtggtgctgcgcccggccacgctgtag
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