Mycobacterium sp. VKM Ac-1817D: G155_13080
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Entry
G155_13080 CDS
T03634
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
myv
Mycobacterium sp. VKM Ac-1817D
Brite
KEGG Orthology (KO) [BR:
myv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
myv03016
]
G155_13080
Enzymes [BR:
myv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G155_13080
Transfer RNA biogenesis [BR:
myv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G155_13080
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIY49418
LinkDB
All DBs
Position
complement(2709309..2710571)
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AA seq
420 aa
AA seq
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MDEDPQVSADPEATEAVETEATPLLSPAEGVPEVCVTAGEISSAATSLAKGSGPFAIDAE
RASGFRYSNRAYLVQIRRAGSGTALIDPVNHGGSPIDAMAPVADALATDEWVLHAADQDL
PCLSEIGLRPGKLYDTELAGRLAGFERVNLAAMVQRLLGLQLMKGHGAADWSKRPLPPEW
LNYAALDVEVLLELRHAVAAVLEEQGKTDWAAQEFEYLRTYVAQPTRRDRWRRTSGIHKV
RNPQALAAVRELWTTRDTIARGRDIAPGRILPDSAIINAATTDPKTVEELIALPVFGGSK
QRKSAKIWLDALARARDNNDPPEANEAQSGPPPAARWARRKPEAAARLEAARAGLAELSQ
RVSVPAENLITPEVVRRLCWDWRPVRDVATAVEEFLVEANVRPWQRELTVPVLTAALSAD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagacccccaagtctccgcagacccagaagctaccgaggccgtcgagaccgaa
gcaaccccgttgctctcgccggccgaaggagtgcccgaggtttgtgtcactgccggggaa
atctcctctgcggcaacatctctggccaagggtagcggcccattcgcgatcgatgccgaa
cgtgcttcgggcttccgttactccaaccgcgcgtacctggtgcagatccggcgtgcgggt
tcgggcaccgcgctgatcgacccggtcaaccacggcggctcccccatcgacgcgatggcg
cccgtggccgatgccctggccaccgacgaatgggtgctgcacgccgccgatcaggacttg
ccgtgcctgtcggagatcggcctgcggccgggcaagctctatgacaccgaactggcgggc
cggctggccggcttcgaacgggtcaacctggccgcgatggtccagcggctgctcggcctg
cagctgatgaaaggccacggggcagccgactggtccaagcgcccgctgccgccggaatgg
ctcaactacgccgccctcgatgtcgaggtgctgctggaactgcgccacgccgtcgccgcg
gtcctcgaagagcagggcaaaaccgactgggcagcacaggaattcgagtatctgcgcacc
tacgtcgcacaaccgacccggcgcgaccgctggcggcgcacctccgggatccacaaggtc
cgcaacccgcaggcgctggccgcggtccgcgagctgtggaccacccgcgacacgatcgcc
cgcggccgcgacatcgcgcccggacggatcctgcccgactccgcgatcatcaacgccgcc
acgaccgatcccaagacggtcgaggaactgatcgcgttgcccgtcttcggcggctccaaa
cagcgcaagagcgcaaagatctggctggacgcgctggcgcgggcgagggacaacaacgat
ccgcccgaggccaacgaggcccagagcggcccaccgccggcggcacggtgggccaggcgc
aagccggaggccgcggcccgcctggaagctgcccgggccggtcttgccgaactgtcgcag
cgagtctcggttcctgccgagaatctcatcacccccgaagtggtgcgccggctgtgctgg
gactggcgtccggtgcgcgacgtggccaccgcagtggaggaattcctcgtcgaggccaac
gtccgtccgtggcaacgggagctgacggtgccggtgctgaccgcagcactcagcgcggac
tga
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