KEGG   Mycobacterium sp. VKM Ac-1817D: G155_17325
Entry
G155_17325        CDS       T03634                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
myv  Mycobacterium sp. VKM Ac-1817D
Pathway
myv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:myv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    G155_17325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:myv03400]
    G155_17325
DNA repair and recombination proteins [BR:myv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G155_17325
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      G155_17325
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran AAA_29 SMC_N AAA_21 RsgA_GTPase AAA_16 AAA_25 DnaJ_CXXCXGXG NACHT Viral_helicase1 BCA_ABC_TP_C ExoX-like_C cobW ScfRs NTPase_1
Other DBs
NCBI-ProteinID: AIY47022
LinkDB
Position
complement(3610112..3613006)
AA seq 964 aa
MADRLIVKGAREHNLRGVDLDLPRDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH
CPVCGERIARQTPQQIVDQVLAMDEGLRFQVLAPVVRTRKGEFVDLFEKLNTQGYSRVRV
DGVVHSLTDPPKLKKQEKHDIEVVVDRLTVKASSKQRLTDSVETALNLADGIVVLEFVDR
EDDHPHREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECTGLGIRKEVDPELVV
PDPELTLAGGAIAPWAVGQSAEYFTRMLSGLGDQLGFDIDTPWKKLPAKARKAILEGSDH
QVHVRYKNRYGRTRSYYADFEGVMAFLQRRMEQTDSEQMKERYEGFMRDIPCPECKGTRL
KPEILAVTMAAGEFGAKSIAQVAELSIADCADFLNALTLGSREQAIAGQVLKEIQSRLGF
LLDVGLDYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLID
TLVRLRDLGNTLIVVEHDLDTIAHADWVVDIGPAAGEHGGRIVHSGTYQDLLTNPESITG
AYLSGKESIEVPAVRRPTDKRRQVTVVGARENNLKEIDVAFPLGVLTSVTGVSGSGKSTL
VNDILASVMANKLNGARQVPGRHTRVNGLDQLDKLVRVDQSPIGRTPRSNPATYTGVFDK
IRSLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCQGAR
YNRETLEVHYKGKTIAEVLDLPIEEAAEFFEPISSIHRYLKTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLKVINGLVDKGNTVIVIEH
NLDVIKTSDWIIDMGPEGGAGGGTVVAQGTPEDVAANPDSYTGQFLAEMVDVPAPKPKRR
KVSA
NT seq 2895 nt   +upstreamnt  +downstreamnt
gtggctgaccgcctgatcgtgaagggtgcgcgcgagcacaatctgcggggagtcgacctc
gacctgccgcgtgatgcgctgatcgtgttcaccggcctgtccgggtcgggcaagtcctcg
ctcgccttcgacaccatcttcgccgaggggcaacgccgctatgtcgagtctctgtcggcc
tacgcccggcagttcctcggccagatggacaagccggacgtcgatttcatcgagggcctt
tcgcccgcggtgtccatcgaccagaagtccaccaaccgcaacccgcgctcgaccgtgggc
accatcaccgaggtctacgactacctgcgtctgctgtacgcccgcgccggcacgccgcac
tgtccggtatgtggtgagcgcatcgcccgccagactccacagcagatcgtggatcaggtc
ctggccatggacgagggcctacggttccaggtgctggctccggtggtccgtacccgcaag
ggcgagttcgtcgacctgttcgagaagctcaacacccagggctacagccgcgtgcgggtg
gacggggtggtgcactcgctgaccgatccgcccaagctcaagaagcaggaaaagcacgac
atcgaggtggtcgtcgaccggctgacggtcaaggccagttccaaacagcggctcacggac
tccgtggagacggcactgaacctggccgacggcatcgtggtgctggagttcgtcgaccgc
gaggatgaccatccacatcgcgagcagcgtttctccgagaagctggcttgccccaacggt
cacccgttggccgtcgatgatcttgaaccccggtcgttctcgttcaactcgccttatggc
gcctgtccggagtgcaccggcctgggcatccgcaaggaggtcgacccggagctggtcgtg
cccgacccggagctcaccctggccggcggtgccatcgcgccgtgggcagtgggtcagagc
gccgagtacttcacccggatgctgtccgggctgggcgatcagctcggattcgacatcgac
accccgtggaagaaactgcctgccaaggcgcgcaaggcgatcctggaaggctcggatcac
caggtccacgtccggtacaagaaccgttacggccgcacccggtcgtactacgccgatttc
gagggcgtgatggcgttcctgcaacgccggatggagcagaccgactcggagcagatgaag
gaacgctacgagggcttcatgcgcgacatcccgtgcccggagtgcaagggcacgcggctc
aagccggagatcctcgcggtgacgatggccgcgggggagttcggggcgaaatccatcgcg
caggtggcggaactgtccatcgcggactgcgccgacttcttgaacgccctcaccctgggg
tcacgtgagcaggccatcgccggtcaggtgctcaaggagatccagtcgcgtctcgggttc
ctgctcgacgtcggcctggactacctgtccctgtcgcgggcggcggccacgttgtccggc
ggcgaggcgcagcgcatccggctggcgacccagatcggttccggactggtcggcgtgctc
tacgtgctcgacgagccgtccatcggtctgcaccagcgtgacaaccgcaggctgatcgac
accctggtgcggctgcgcgacctgggcaacaccctgatcgtcgtcgaacacgacctcgac
accatcgcccatgccgactgggtggtcgacatcgggccggctgccggtgagcacggcggc
cggatcgtgcacagcggtacctaccaggatctgctgaccaaccccgaatccatcaccggc
gcatacctttccggcaaggagagcatcgaggtgccggcggtccggcggcccaccgacaag
cgtcggcaggtcacggtcgtcggcgcgcgggagaacaacctcaaggagatcgacgtcgcg
ttcccgctgggcgtgctgacgtcggtcaccggggtgtccggctcgggaaagtcgacgctg
gtcaacgacatcctggcctcggtgatggccaacaagctcaacggtgcccggcaggtgccc
ggcaggcacacccgcgtcaacgggctcgaccaactggacaagctggtgcgcgtcgaccaa
tcgccgatcggccgcacgccacggtcaaacccggccacctataccggggtgttcgacaag
atccggtccctgttcgccgccaccaccgaggccaaggttcgtggctatcagccgggccgg
ttctccttcaacgtcaagggcggccggtgtgaggcctgctcgggtgacggcaccatcaag
atcgagatgaacttcctgcccgacgtctatgtgccgtgcgaggtgtgccagggcgcccgg
tacaaccgggaaacccttgaggtgcactacaagggcaagaccatcgccgaggtgctcgat
ctgccgatcgaggaggccgccgagttcttcgagccgatcagctccatccaccgctacctc
aagaccctggtcgacgtcggtctgggctacgtgcggttgggccagccggcgccgacgctg
tccggtggcgaggcgcaacgcgtcaagctcgccgccgaactgcagaagcggtcgacgggg
cgcacggtgtacatcctcgacgagccgaccaccggtctgcacttcgaggacatccgcaag
ctgctcaaggtgatcaacggccttgtcgacaaaggcaatacggtgatcgtcatcgagcac
aacctcgacgtgatcaagacctcggactggatcatcgacatgggccccgagggcggagcc
gggggcggcaccgtggtggcgcagggcacgccggaggatgtcgcggccaacccggacagc
tacacgggccagttcctggccgagatggtcgatgtgcctgcaccgaaacccaagcggcgc
aaggtcagtgcctga

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