Mycobacterium sp. VKM Ac-1817D: G155_21865
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Entry
G155_21865 CDS
T03634
Name
(GenBank) cold-shock protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
myv
Mycobacterium sp. VKM Ac-1817D
Pathway
myv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G155_21865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myv03019
]
G155_21865
03009 Ribosome biogenesis [BR:
myv03009
]
G155_21865
Enzymes [BR:
myv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G155_21865
Messenger RNA biogenesis [BR:
myv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G155_21865
Ribosome biogenesis [BR:
myv03009
]
Prokaryotic type
rRNA helicases
G155_21865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
P-loop_SecA
HEM4
Flavi_DEAD
Surface-like_ins_dom
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIY47765
LinkDB
All DBs
Position
complement(4583354..4585084)
Genome browser
AA seq
576 aa
AA seq
DB search
MTSPDPDSGDTAPTFADLQIDPAVLKAVTDVGYESPSAIQAATIPAMLAGSDVVGLAQTG
TGKTAAFAIPILSKIDTSSRKTQALVLAPTRELALQVAEAFGRYGAHLPEINVLPIYGGA
SYTVQLSGLRRGAQVVVGTPGRVIDHLERGTLDLSNLDYLVLDEADEMLTMGFAEEVERI
LADTPEYKQVALFSATMPPAIRKITTKYLHDPVEVTVKAKTATAENITQRFIQVAGARKL
DALTRVLEVEEGDAMIVFVRTKQATEEVAERLRSRGFAAAAINGDINQAQRERTITALKD
GTIDILIATDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGHALLFVTPRE
RHLLKSIEKHTRSKVIEAELPSVDDVNAQRVAKFRDSITDSLNSDGLELFRRLIEDYERE
NDVPMADIAAALALQSRNGEEFLMTEPPPEKRRERDRDDRGERAPRKERPPREGLATYRI
SVGKRHKVGPGHIVGAIANEGGLHRNEFGHITIRGDYSLVELPEKLPGKTLKALENTRIS
GMLINLTPERGPRRDHKDKDHKDRSGYRGKPHRKTK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccagacccggattcgggggataccgccccgacgtttgccgacctgcagatt
gatcctgcggtgttgaaggcagtcactgatgtcggctacgaatcgccttcggcgatccag
gccgcgaccattccggcgatgctcgcgggctccgacgtggtcggtctggcccagaccggc
accggcaagacagccgcgttcgccatcccgatcctgtccaagatcgacacctccagccgc
aagacccaggcgctggtgctggcccccacccgtgagctggctctgcaggtcgccgaggca
ttcggccgttacggcgcacatctgcccgagatcaacgtgctgccgatctacggcggcgcg
tcctacacggtgcagttgtccggtcttcgtcgcggcgcccaggtggtggtgggcacgccg
ggccgcgtgatcgaccacctcgagcgcggcacgctggatctgtcgaaccttgactacctc
gtgctcgacgaggccgacgaaatgctcaccatgggcttcgccgaagaggtcgagcgcatc
ctcgccgacacccccgagtacaagcaggtggcgctgttctcggccaccatgccgccggcc
atccgcaagatcaccaccaagtacctgcacgatccggtggaggtcacggtcaaggccaag
accgccaccgcggagaacatcacccagcggttcatccaggtcgccggtgcgcgcaagctg
gacgcgttgacgcgggtgctcgaggtcgaagagggcgacgcgatgatcgtgttcgtccgc
accaagcaggccaccgaggaggtggccgagcggctgaggtcccgcggtttcgcggcggcg
gccatcaacggtgacatcaaccaggctcagcgcgagcgcaccatcaccgcgctcaaggac
ggcaccatcgacatcctgatcgccaccgacgtcgccgcccgcggtttggacgtcgaacgc
atcagccatgtcgtcaactacgacatcccgcacgacaccgagtcctatgtgcatcgcatc
gggcgcaccggccgggccgggcgttccgggcatgcgctgctgttcgtcaccccgcgcgaa
cgccacctgctcaagtccatcgagaagcacacccggtccaaggtcatcgaggccgagctg
cccagcgtcgacgacgtcaacgcgcagcgggtggcgaagttccgtgactcgatcaccgac
tcgctcaacagcgacgggctcgagctgttccgcaggttgatcgaggactacgagcgcgag
aacgacgtgccgatggccgatatcgccgcggcgctggcgctgcagtcgcgcaacggcgaa
gagttcctgatgacggagccgccgccggagaagcgccgtgaacgcgaccgcgacgatcgg
ggcgagcgggctccgcgcaaggagcggccgccgcgcgaaggccttgccacctaccggatc
tcggtgggcaagcggcacaaggtgggtccgggccatattgtcggtgccatcgccaacgag
ggtggcctgcaccgcaacgagttcggccacatcacgatccgcggcgactactcgttggtg
gagctgccggagaagctgcctggcaagacactcaaagccttggagaacacccggatctcg
ggcatgttgatcaatctgacgcccgagcgtgggccgcgtcgtgatcacaaggacaaggac
cacaaggaccggtctggataccgggggaagccgcaccggaagaccaagtga
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