Mycobacterium sp. MS1601: BVC93_20990
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Entry
BVC93_20990 CDS
T10274
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
myw Mycobacterium sp. MS1601
Pathway
myw03018
RNA degradation
Brite
Enzymes [BR:
myw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BVC93_20990
Messenger RNA biogenesis [BR:
myw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BVC93_20990
Ribosome biogenesis [BR:
myw03009
]
Prokaryotic type
rRNA processing factors
BVC93_20990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AQA04492
UniProt:
A0A1P8XDU1
LinkDB
All DBs
Position
4320963..4324058
Genome browser
AA seq
1031 aa
AA seq
DB search
MDDDAQIHDHTDSSAAENSAPADNGGDTSHPEIPERLRVHSLARVLGTTSRRVLEALAEF
DGRSRSAHSSVDRVDAVKVRDVLAAAEQAQAPAPQPQSVPEPEVAPEPEAAPELEVAPES
RPELEIVEPDTPQVAESEFATISSADEVPEGEPESRLLIDVPQEPESEASDAVVADYLPL
FVAPQPVKDRPVRERPAPEVRADEADSDTDDGDTDDGDDSDDEQAEKPANRRRRRGRRGR
GRGRGGEPGSDDDSDDEQAEKSDTEDKSDGDEAAEDSSDDDGEDDDSGSGDGSSRRRRRR
RRRKSGSSDDGGESASPDDPPNTVVHERAPRSKADKADKASNEIQGISGSTRLEAKRQRR
RDGRDAGRRRPPILSEAEFLARREAVERTMIVRDKIRTEPPHAGARYTQIAVLEDGVVVE
HFVTSAGSASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGAQRK
IEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQR
LKEILREVVPADAGVIIRTASEGVKEEDIRTDVERLQKRWTEVEAKAAEVTGKKAGAAVA
LYEEPDVLVKVIRDLFNEDFSGLIVSGDDAWKTINDYVASVAPELMSKLTKYDAADNGGP
DVFAVHRIDEQLTKAMDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGAGGNLEQTVTKN
NLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEALARDRTRHQVSEVTSL
GLVQLTRKKLGTGLVEAFSTTCTHCAGRGIVLHSDPVDSGAPAPARKAAEPAGGSRRSKR
SGKRGKAEEPTPEVARVPTHSAEHPMFKAMAAANGKHEDDDESDIDESDIETAESEEILT
EEAVHDAVGEEQSQERVDAELEDDFDDSDDDDDSDDDDSDDDDDSEDESDELDLDEVDED
EDEDEDDDIELDEDSDESDEDDDDSDDDDDSDDEESDDDPEDEPEPVVEVISTTRPRRRR
AAARPAGPPKA
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgatgcccaaatccatgaccacaccgacagcagcgccgcggagaacagcgcg
cctgctgacaacggcggggacacctctcacccggagattcccgagcgactgagagtccac
tcgctggccagggtgcttggcaccaccagccgccgcgtgctcgaagcgctcgccgagttc
gacggccggtcccgcagcgcgcactccagtgtggatcgtgttgacgcggtgaaggtgcgt
gacgtcctcgccgcggccgagcaggcccaggcgcccgccccacaaccacagtcggtgccc
gaacccgaggttgcgccggaacccgaggccgctccggaactcgaggtggctccggaatcg
cgacctgaactggaaatcgtcgagcccgacacgccgcaggttgccgaatccgagttcgcg
accatctcctcagcggacgaggtgcccgagggcgagcctgaatcccggctgctgatcgac
gtgccgcaggagccggagtccgaggcctccgatgccgtggtggccgactatctgccgctg
ttcgtggcaccgcagccggtcaaggaccggccggtcagggaacgtcccgcccccgaggtg
cgtgctgacgaggccgactccgacaccgatgacggcgacaccgacgacggtgacgactcc
gatgacgagcaggccgaaaagccggccaaccgcaggcgccggcgtggacgccgtggccgt
ggccgcggtcgcggtggtgaacccgggtccgacgatgactccgacgacgagcaggccgag
aagtccgacaccgaggacaagtccgatggtgacgaggctgctgaggattcttcggacgac
gacggcgaggacgacgacagcggcagcggtgacggctccagccggcgccgtcgcaggcgt
cgtcgccgcaagtccggttccagcgacgacgggggtgagtcggcctcgcctgacgacccg
ccgaacaccgtcgtccacgaacgcgcccctcgcagcaaggccgacaaggccgacaaggcg
tccaacgagatccagggcatcagtgggtccacccgactggaggccaaacgccagcgccgc
cgtgacggccgtgacgccggtcgtcgccgcccgccgatcctgtccgaggccgagttcctg
gcccgccgggaggctgtcgagcggaccatgatcgtgcgggacaagatccgcaccgagccg
ccgcatgccggcgcccgctacacccagatcgcggttctcgaagacggcgtggtggtggag
cattttgtcacctcggccgggtccgcttcgttggtcggcaacatctacctcggcatcgtg
cagaacgtcctgccgtccatggaggcggcgttcgtcgacatcggccgcggccgcaacggc
gtcctgtacgccggcgaggtcaactgggaggccgctgggctcggcggcgcccaacgcaag
atcgagcaggccctcaagcccggcgattacgtcgtcgtccaggtcagcaaggacccggtg
gggcacaagggcgcgcggctgaccacacaggtgtccctggccggccgctacctggtctac
gttcccggcgcctcgtcgacgggcatcagccgcaagctgcccgacaccgagcgccagcgg
ctcaaggagatcctgcgtgaggtggttcccgccgacgccggcgtgatcatccgcaccgcc
tccgaaggcgtcaaggaagaggacatccgcacggatgtcgagcgcctgcagaagcggtgg
accgaagtcgaggccaaggctgccgaggtcaccggcaagaaggccggcgccgccgtcgcg
ctgtacgaagagcccgatgtgctggtcaaggtgatccgcgacctgttcaacgaagacttc
tccggactgatcgtttccggtgacgatgcctggaagaccatcaacgactatgtcgcctcg
gtggctccggagctgatgtcgaagctgacgaagtacgacgcggctgacaacggcgggccc
gacgtcttcgcggtgcaccgcatcgacgagcagctgacgaaggccatggaccgcaaggtg
tggctgccgtccggcggcaccctggtgatcgaccgcaccgaggccatgaccgtggtggac
gtcaacaccggcaaattcaccggtgccggcggcaacctcgagcagaccgtcaccaagaac
aacctggaagctgccgaggagatcgtgcgccaactgcggctgcgcgatatcggcggcatc
gtggtgatcgacttcatcgacatggtgctggagtccaaccgggacctggtgctgcgcagg
ctcaccgaagccctggcacgcgaccgcacccggcatcaggtctccgaggtgacctcgctg
ggcctggtgcagttgacccgcaagaagttgggcaccggcctggtcgaggcgttctccacc
acctgcacccactgtgcgggccgcggcatcgtcctgcacagtgatccggtcgattcgggg
gcgcccgcaccggcgcgcaaggccgctgagcctgccgggggcagccggcgcagcaagcgt
tctggcaagaggggcaaggccgaggagcccacaccggaagtcgcccgggtgcccacgcac
agtgccgagcatccgatgttcaaggcgatggccgccgccaatggcaagcacgaagacgac
gacgaatccgacatcgacgaatccgacatcgagaccgccgagtccgaggagatcctcacc
gaggaggctgtgcacgatgcggtcggtgaggaacagtcgcaggagcgggtggacgccgaa
ctcgaggatgacttcgacgattcggacgacgacgacgattcggacgacgacgattcggac
gacgacgatgattcggaggacgagtccgacgaactcgatctcgacgaggtagacgaggac
gaggacgaggacgaggacgacgacatcgaactcgacgaggactcggacgaatccgacgag
gacgacgacgactccgatgacgacgacgattccgatgacgaagagtccgacgacgacccc
gaggacgagcccgaacccgtcgttgaggtgatctccaccactcggccacgtcgccgtcgg
gcggccgcaagacccgcggggccgccaaaggcctga
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