Myxococcus sp. MxC21-1: QEG98_11110
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Entry
QEG98_11110 CDS
T09754
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
myx
Myxococcus sp. MxC21-1
Pathway
myx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QEG98_11110 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myx03019
]
QEG98_11110 (pnp)
03016 Transfer RNA biogenesis [BR:
myx03016
]
QEG98_11110 (pnp)
Enzymes [BR:
myx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QEG98_11110 (pnp)
Messenger RNA biogenesis [BR:
myx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QEG98_11110 (pnp)
Transfer RNA biogenesis [BR:
myx03016
]
Prokaryotic type
tRNA degradation factors
QEG98_11110 (pnp)
BRITE hierarchy
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
Motif
Other DBs
NCBI-ProteinID:
WNZ64168
UniProt:
A0AA96XNV7
LinkDB
All DBs
Position
2336831..2338999
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AA seq
722 aa
AA seq
DB search
MLKKSVKIGESELSIEVGRLAKQADGSVVVRYGDTMLLVTAVSAREKKDIDFLPLTVEYQ
EKLYSAGRIPGSYFKREGRLTEKETLASRLVDRSCRPLFPEGYAYETQVIASVISSDPEN
EGDIHGITGASAALWVSDIPFDGPIAGIRVGRVGGQLVANPTAKQREQSDLDLVMAVSRK
AIVMVEGGAEEVSEADMVAALDFGFKTAQPALDLQDELRRELNKQVRSFEKPAAVDEGLR
AKVRELAMDGIKAGYGIKEKGARYEALGKTKKETLAKLKEQLGDGYTPLVEKHAKSVVED
LKYEHMREMTVNGGRIGDRGHDVVRPITCEVGVLPRTHGSAVFTRGETQALVVTTLGTSD
DEQRLEMLGGMAFKRFMLHYNFPPFSVNETKPLRGPGRREVGHGALAERALRNMVPKSES
FPYTVRLVSDILESNGSSSMASVCGGTLALMDAGVPLKAPVAGIAMGLVKEGDKIAILSD
ILGDEDHLGDMDFKVCGTSKGITSIQMDIKITGLTTEIMSRALEQARQGRLHILGEMLKT
LAESRKEISQYAPRITTIQIRPEFIKNVIGPGGKVIKDIIARTGAAINIEDSGRVDIASA
NGEAVKAAIAMIQALTREAEIGKIYTGTVRKIAEFGAFVELFPGTDGLIHISELSDKRVK
SVSDVLNEGDEVLVKVVSIDKTGKIRLSRKEAMAERAAQQGAAVSEAAAQPAPAPTQPDA
KA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaagagcgtcaagattggcgagagcgagctgagcatcgaagtgggtcgtctg
gcgaagcaggccgacggttccgtggtggtccgctatggcgacaccatgctgctggtgacg
gcggtgagcgcccgggagaagaaggacatcgacttcctccccctgacggtggagtaccag
gagaagctgtattcggccggccgcatccccggcagctacttcaagcgcgagggccgcctc
acggagaaggagacgctggccagccgcctggtcgaccgctcctgccgcccgctgttcccg
gaaggctacgcatacgagacgcaggtcatcgccagcgtcatctcctccgacccggagaac
gagggtgacatccacggcatcaccggcgcctccgcggcgctgtgggtgtcggacatcccg
ttcgacggccccatcgccggcatccgcgtgggccgcgtcggcggtcagctggtggccaac
cccaccgcgaagcagcgcgagcagagcgacctggacctggtcatggcggtgagccgcaag
gccatcgtcatggtggaaggtggcgcggaggaggtctccgaggccgacatggtcgcggcg
ctcgacttcggcttcaagacggcgcagcccgcgctggacctgcaggacgagctgcggcgc
gagctgaacaagcaggttcgctccttcgagaagcccgccgccgtggacgagggcctgcgc
gccaaggtgcgcgagctggccatggacggcatcaaggcgggctacggcatcaaggagaag
ggcgcgcgctacgaggcgctcggcaagacgaagaaggagacgctcgccaagctcaaggag
caactgggcgacggctacaccccgctggtggagaagcacgccaagtcggtggtggaggac
ctgaagtacgagcacatgcgcgagatgacggtcaacggtggccgtatcggcgaccgtggc
cacgacgtggtccgtccgattacgtgcgaggtgggcgtgctcccgcgcacccacggcagc
gccgtcttcacgcgcggcgagacgcaggcgctcgtggtcaccacgctgggcaccagcgat
gacgagcagcgcctggagatgctgggcggcatggccttcaagcgcttcatgctgcactac
aacttcccgccgttcagcgtgaacgagacgaagccgctgcgtggcccgggccgccgtgaa
gtcggccacggggcgctggcggagcgcgcgctgcgcaacatggtgccgaagagcgagtcc
ttcccgtacacggtgcgcctggtgtcggacatcctggagtccaacggctcctcgtccatg
gcctccgtctgcggcggcacgctggcgctgatggacgcgggtgttccgctcaaggccccg
gtggcgggtatcgccatggggctggtgaaggagggcgacaagattgccatcctctccgac
atcctcggtgacgaggaccacctgggcgacatggacttcaaggtgtgcggcacctcgaag
ggcatcacgtccatccagatggacatcaagatcaccggcctcacgacggaaatcatgagc
cgcgcgctggagcaggcgcgtcagggccgcctccacatcctgggtgagatgctcaagacg
ctggccgagtcccgcaaggagatcagccagtacgcgccgcgcatcaccaccatccagatt
cgtcccgagttcatcaagaacgtcatcgggccgggcggcaaggtcatcaaggacatcatc
gcccgcacgggtgccgcgattaacatcgaggactcgggccgcgtggacatcgccagcgcg
aacggcgaggccgtgaaggccgccatcgcgatgattcaggcgctgacccgcgaggcggag
attgggaagatctacacgggcacggtgcgcaagatcgccgagttcggcgccttcgtggag
ctgttcccgggcaccgacggcctcatccacatctccgagctgtccgacaagcgcgtcaag
agcgtctccgacgtgctgaacgagggcgacgaggtgttggtgaaggtcgtcagcatcgac
aagacgggcaagattcgcctgtcgcgcaaggaggccatggcggagcgcgccgcgcagcag
ggcgccgccgtcagtgaggccgccgcgcagccggcgcccgcgcccacgcagcctgacgcc
aaggcctga
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